RNA–Protein interactions for RNA: ENST00000518882.2

PCDHGA11-202, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDHGA11, Length 2,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-202ENST00000518882 GLMNQ92990 594 aa16.15■□□□□ 0.18
PCDHGA11-202ENST00000518882 TSSK3Q96PN8 268 aa16.15■□□□□ 0.18
PCDHGA11-202ENST00000518882 BTBD2Q9BX70 525 aa16.15■□□□□ 0.18
PCDHGA11-202ENST00000518882 WDR12Q9GZL7 423 aaKnown RBP16.15■□□□□ 0.18
PCDHGA11-202ENST00000518882 DUSP21Q9H596 190 aa16.15■□□□□ 0.18
PCDHGA11-202ENST00000518882 CWH43Q9H720 699 aa16.15■□□□□ 0.18
PCDHGA11-202ENST00000518882 IL26Q9NPH9 171 aa16.15■□□□□ 0.18
PCDHGA11-202ENST00000518882 NADKO95544 446 aaPredicted RBP16.15■□□□□ 0.18
PCDHGA11-202ENST00000518882 BMP4P12644 408 aa16.15■□□□□ 0.18
PCDHGA11-202ENST00000518882 JUNDP17535 347 aa16.15■□□□□ 0.18
PCDHGA11-202ENST00000518882 NEK2P51955 445 aa16.15■□□□□ 0.18
PCDHGA11-202ENST00000518882 GTF2H3Q13889 308 aa16.15■□□□□ 0.18
PCDHGA11-202ENST00000518882 ARHGEF7Q14155 803 aa16.15■□□□□ 0.18
PCDHGA11-202ENST00000518882 CST9Q5W186 159 aa16.15■□□□□ 0.18
PCDHGA11-202ENST00000518882 CAPN13Q6MZZ7 669 aaPredicted RBP16.15■□□□□ 0.18
PCDHGA11-202ENST00000518882 ADGRG2Q8IZP9 1017 aa16.15■□□□□ 0.18
PCDHGA11-202ENST00000518882 TMEM132CQ8N3T6 1108 aa16.15■□□□□ 0.18
PCDHGA11-202ENST00000518882 CEP295NLQ96MC4 621 aa16.15■□□□□ 0.18
PCDHGA11-202ENST00000518882 TM6SF2Q9BZW4 377 aa16.15■□□□□ 0.18
PCDHGA11-202ENST00000518882 RNF38Q9H0F5 515 aa16.15■□□□□ 0.18
PCDHGA11-202ENST00000518882 PARVBQ9HBI1 364 aa16.15■□□□□ 0.18
PCDHGA11-202ENST00000518882 SLC22A1O15245 554 aa16.14■□□□□ 0.17
PCDHGA11-202ENST00000518882 LRATO95237 230 aa16.14■□□□□ 0.17
PCDHGA11-202ENST00000518882 CCND3P30281 292 aaPredicted RBP16.14■□□□□ 0.17
PCDHGA11-202ENST00000518882 S100A3P33764 101 aa16.14■□□□□ 0.17
PCDHGA11-202ENST00000518882 TGFBR1P36897 503 aa16.14■□□□□ 0.17
PCDHGA11-202ENST00000518882 SLC11A1P49279 550 aa16.14■□□□□ 0.17
PCDHGA11-202ENST00000518882 CLDN8P56748 225 aa16.14■□□□□ 0.17
PCDHGA11-202ENST00000518882 HUNKP57058 714 aa16.14■□□□□ 0.17
PCDHGA11-202ENST00000518882 NCS1P62166 190 aa16.14■□□□□ 0.17
PCDHGA11-202ENST00000518882 NKX3-2P78367 333 aa16.14■□□□□ 0.17
PCDHGA11-202ENST00000518882 FPGSQ05932 587 aa16.14■□□□□ 0.17
PCDHGA11-202ENST00000518882 ZXDCQ2QGD7 858 aaPredicted RBP16.14■□□□□ 0.17
PCDHGA11-202ENST00000518882 PGS1Q32NB8 556 aa16.14■□□□□ 0.17
PCDHGA11-202ENST00000518882 ADGRF1Q5T601 910 aa16.14■□□□□ 0.17
PCDHGA11-202ENST00000518882 MFSD14CQ5VZR4 134 aa16.14■□□□□ 0.17
PCDHGA11-202ENST00000518882 FUT10Q6P4F1 479 aa16.14■□□□□ 0.17
PCDHGA11-202ENST00000518882 DOK6Q6PKX4 331 aa16.14■□□□□ 0.17
PCDHGA11-202ENST00000518882 SNX20Q7Z614 316 aa16.14■□□□□ 0.17
PCDHGA11-202ENST00000518882 MYO19Q96H55 970 aa16.14■□□□□ 0.17
PCDHGA11-202ENST00000518882 EGLN2Q96KS0 407 aa16.14■□□□□ 0.17
PCDHGA11-202ENST00000518882 ZNF300Q96RE9 604 aaPredicted RBP16.14■□□□□ 0.17
PCDHGA11-202ENST00000518882 LATS2Q9NRM7 1088 aa16.14■□□□□ 0.17
PCDHGA11-202ENST00000518882 AP3M1Q9Y2T2 418 aa16.14■□□□□ 0.17
PCDHGA11-202ENST00000518882 ANAPC1Q9H1A4 1944 aa16.14■□□□□ 0.17
PCDHGA11-202ENST00000518882 hCG_2039718K7EN88 272 aa16.14■□□□□ 0.17
PCDHGA11-202ENST00000518882 M0R3G1 203 aa16.14■□□□□ 0.17
PCDHGA11-202ENST00000518882 WNT9AO14904 365 aa16.14■□□□□ 0.17
PCDHGA11-202ENST00000518882 STK16O75716 305 aa16.14■□□□□ 0.17
PCDHGA11-202ENST00000518882 PGLSO95336 258 aa16.14■□□□□ 0.17
PCDHGA11-202ENST00000518882 PARNO95453 639 aaKnown RBP16.14■□□□□ 0.17
PCDHGA11-202ENST00000518882 MT-ND2P03891 347 aa16.14■□□□□ 0.17
PCDHGA11-202ENST00000518882 ACRV1P26436 265 aa16.14■□□□□ 0.17
PCDHGA11-202ENST00000518882 GKP32189 559 aa16.14■□□□□ 0.17
PCDHGA11-202ENST00000518882 CLCA4Q14CN2 919 aa16.14■□□□□ 0.17
PCDHGA11-202ENST00000518882 PAGE2BQ5JRK9 111 aa16.14■□□□□ 0.17
PCDHGA11-202ENST00000518882 HECTD3Q5T447 861 aa16.14■□□□□ 0.17
PCDHGA11-202ENST00000518882 KDM4DQ6B0I6 523 aa16.14■□□□□ 0.17
PCDHGA11-202ENST00000518882 P2RY8Q86VZ1 359 aa16.14■□□□□ 0.17
PCDHGA11-202ENST00000518882 RASAL3Q86YV0 1011 aa16.14■□□□□ 0.17
PCDHGA11-202ENST00000518882 CADM3Q8N126 398 aa16.14■□□□□ 0.17
PCDHGA11-202ENST00000518882 DYNC2LI1Q8TCX1 351 aa16.14■□□□□ 0.17
PCDHGA11-202ENST00000518882 ZNF641Q96N77 438 aaPredicted RBP16.14■□□□□ 0.17
PCDHGA11-202ENST00000518882 CDK5RAP1Q96SZ6 601 aaKnown RBP16.14■□□□□ 0.17
PCDHGA11-202ENST00000518882 GABARAPL1Q9H0R8 117 aa16.14■□□□□ 0.17
PCDHGA11-202ENST00000518882 ABCG8Q9H221 673 aa16.14■□□□□ 0.17
PCDHGA11-202ENST00000518882 ZFYVE1Q9HBF4 777 aa16.14■□□□□ 0.17
PCDHGA11-202ENST00000518882 NECTIN3Q9NQS3 549 aa16.14■□□□□ 0.17
PCDHGA11-202ENST00000518882 TRIM17Q9Y577 477 aa16.14■□□□□ 0.17
PCDHGA11-202ENST00000518882 PLXNB3Q9ULL4 1909 aa16.13■□□□□ 0.17
PCDHGA11-202ENST00000518882 A8MX80 341 aa16.13■□□□□ 0.17
PCDHGA11-202ENST00000518882 MYO1GB0I1T2 1018 aa16.13■□□□□ 0.17
PCDHGA11-202ENST00000518882 CLDN7O95471 211 aa16.13■□□□□ 0.17
PCDHGA11-202ENST00000518882 CLDN9O95484 217 aa16.13■□□□□ 0.17
PCDHGA11-202ENST00000518882 FADS2O95864 444 aaKnown RBP16.13■□□□□ 0.17
PCDHGA11-202ENST00000518882 HOXA9P31269 272 aa16.13■□□□□ 0.17
PCDHGA11-202ENST00000518882 ABHD18Q0P651 414 aa16.13■□□□□ 0.17
PCDHGA11-202ENST00000518882 DNASE1L3Q13609 305 aa16.13■□□□□ 0.17
PCDHGA11-202ENST00000518882 INAQ16352 499 aa16.13■□□□□ 0.17
PCDHGA11-202ENST00000518882 SYT6Q5T7P8 510 aaPredicted RBP16.13■□□□□ 0.17
PCDHGA11-202ENST00000518882 ARMC12Q5T9G4 340 aa16.13■□□□□ 0.17
PCDHGA11-202ENST00000518882 OR2T5Q6IEZ7 315 aa16.13■□□□□ 0.17
PCDHGA11-202ENST00000518882 SETD9Q8NE22 299 aa16.13■□□□□ 0.17
PCDHGA11-202ENST00000518882 OR2T29Q8NH02 315 aa16.13■□□□□ 0.17
PCDHGA11-202ENST00000518882 RPL3LQ92901 407 aaKnown RBP16.13■□□□□ 0.17
PCDHGA11-202ENST00000518882 UBE2FQ969M7 185 aa16.13■□□□□ 0.17
PCDHGA11-202ENST00000518882 PLD4Q96BZ4 506 aa16.13■□□□□ 0.17
PCDHGA11-202ENST00000518882 TRBV5-4A0A0C4DH59 114 aa16.12■□□□□ 0.17
PCDHGA11-202ENST00000518882 BPIP17213 487 aa16.12■□□□□ 0.17
PCDHGA11-202ENST00000518882 RPL17P18621 184 aaKnown RBP16.12■□□□□ 0.17
PCDHGA11-202ENST00000518882 SDC1P18827 310 aa16.12■□□□□ 0.17
PCDHGA11-202ENST00000518882 TGM1P22735 817 aa16.12■□□□□ 0.17
PCDHGA11-202ENST00000518882 PSMB9P28065 219 aa16.12■□□□□ 0.17
PCDHGA11-202ENST00000518882 VLDLRP98155 873 aa16.12■□□□□ 0.17
PCDHGA11-202ENST00000518882 KEAP1Q14145 624 aa16.12■□□□□ 0.17
PCDHGA11-202ENST00000518882 VTCN1Q7Z7D3 282 aa16.12■□□□□ 0.17
PCDHGA11-202ENST00000518882 CCDC71Q8IV32 467 aaPredicted RBP16.12■□□□□ 0.17
PCDHGA11-202ENST00000518882 BEND7Q8N7W2 519 aaPredicted RBP16.12■□□□□ 0.17
PCDHGA11-202ENST00000518882 WFDC5Q8TCV5 224 aa16.12■□□□□ 0.17
PCDHGA11-202ENST00000518882 S100ZQ8WXG8 99 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms