RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 GPR68Q15743 365 aa8.75□□□□□ -1.01
VCAN-208ENST00000512590 NEDD8Q15843 81 aa8.75□□□□□ -1.01
VCAN-208ENST00000512590 ENPP6Q6UWR7 440 aa8.75□□□□□ -1.01
VCAN-208ENST00000512590 ISLR2Q6UXK2 745 aa8.75□□□□□ -1.01
VCAN-208ENST00000512590 PIM3Q86V86 326 aa8.75□□□□□ -1.01
VCAN-208ENST00000512590 FOXRED2Q8IWF2 684 aa8.75□□□□□ -1.01
VCAN-208ENST00000512590 SLC34A3Q8N130 599 aa8.75□□□□□ -1.01
VCAN-208ENST00000512590 C11orf24Q96F05 449 aaPredicted RBP8.75□□□□□ -1.01
VCAN-208ENST00000512590 MS4A14Q96JA4 679 aa8.75□□□□□ -1.01
VCAN-208ENST00000512590 ZNF514Q96K75 400 aaPredicted RBP8.75□□□□□ -1.01
VCAN-208ENST00000512590 PAFAH2Q99487 392 aa8.75□□□□□ -1.01
VCAN-208ENST00000512590 SRRDQ9UH36 339 aa8.75□□□□□ -1.01
VCAN-208ENST00000512590 GTF2IRD1Q9UHL9 959 aa8.75□□□□□ -1.01
VCAN-208ENST00000512590 LEF1Q9UJU2 399 aaPredicted RBP8.75□□□□□ -1.01
VCAN-208ENST00000512590 ADAMTS12P58397 1594 aa8.74□□□□□ -1.01
VCAN-208ENST00000512590 SCO2O43819 266 aa8.74□□□□□ -1.01
VCAN-208ENST00000512590 ANXA4P09525 319 aaPredicted RBP8.74□□□□□ -1.01
VCAN-208ENST00000512590 PNMA6AP0CW24 399 aaPredicted RBP8.74□□□□□ -1.01
VCAN-208ENST00000512590 KCNC1P48547 511 aa8.74□□□□□ -1.01
VCAN-208ENST00000512590 ZNF234Q14588 700 aa8.74□□□□□ -1.01
VCAN-208ENST00000512590 BRMS1LQ5PSV4 323 aa8.74□□□□□ -1.01
VCAN-208ENST00000512590 FBXO46Q6PJ61 603 aaPredicted RBP8.74□□□□□ -1.01
VCAN-208ENST00000512590 PIAS4Q8N2W9 510 aaPredicted RBP8.74□□□□□ -1.01
VCAN-208ENST00000512590 TPCN2Q8NHX9 752 aa8.74□□□□□ -1.01
VCAN-208ENST00000512590 DIO2Q92813 273 aa8.74□□□□□ -1.01
VCAN-208ENST00000512590 C9orf16Q9BUW7 83 aa8.74□□□□□ -1.01
VCAN-208ENST00000512590 ELAC1Q9H777 363 aaKnown RBP8.74□□□□□ -1.01
VCAN-208ENST00000512590 PRTFDC1Q9NRG1 225 aa8.74□□□□□ -1.01
VCAN-208ENST00000512590 GNG13Q9P2W3 67 aa8.74□□□□□ -1.01
VCAN-208ENST00000512590 PCDHA2Q9Y5H9 948 aa8.74□□□□□ -1.01
VCAN-208ENST00000512590 ZNF521Q96K83 1311 aa8.74□□□□□ -1.01
VCAN-208ENST00000512590 DUXAA6NLW8 204 aa8.74□□□□□ -1.01
VCAN-208ENST00000512590 GRXCR1A8MXD5 290 aa8.74□□□□□ -1.01
VCAN-208ENST00000512590 LILRB5O75023 590 aa8.74□□□□□ -1.01
VCAN-208ENST00000512590 LATS1O95835 1130 aa8.74□□□□□ -1.01
VCAN-208ENST00000512590 EOMESO95936 686 aa8.74□□□□□ -1.01
VCAN-208ENST00000512590 ITGA2BP08514 1039 aa8.74□□□□□ -1.01
VCAN-208ENST00000512590 PRAMEF17Q5VTA0 474 aa8.74□□□□□ -1.01
VCAN-208ENST00000512590 SPATC1Q76KD6 591 aa8.74□□□□□ -1.01
VCAN-208ENST00000512590 JAGN1Q8N5M9 183 aa8.74□□□□□ -1.01
VCAN-208ENST00000512590 SLC5A8Q8N695 610 aa8.74□□□□□ -1.01
VCAN-208ENST00000512590 KCTD13Q8WZ19 329 aa8.74□□□□□ -1.01
VCAN-208ENST00000512590 CERS2Q96G23 380 aa8.74□□□□□ -1.01
VCAN-208ENST00000512590 PRAG1Q86YV5 1406 aa8.74□□□□□ -1.01
VCAN-208ENST00000512590 KIAA0556O60303 1618 aa8.74□□□□□ -1.01
VCAN-208ENST00000512590 DDTLA6NHG4 134 aaPredicted RBP8.74□□□□□ -1.01
VCAN-208ENST00000512590 FAM170BA6NMN3 283 aa8.74□□□□□ -1.01
VCAN-208ENST00000512590 TOR1AO14656 332 aa8.74□□□□□ -1.01
VCAN-208ENST00000512590 EIF5AP63241 154 aaKnown RBP8.74□□□□□ -1.01
VCAN-208ENST00000512590 MCL1Q07820 350 aa8.74□□□□□ -1.01
VCAN-208ENST00000512590 PON2Q15165 354 aa8.74□□□□□ -1.01
VCAN-208ENST00000512590 LRRC73Q5JTD7 316 aa8.74□□□□□ -1.01
VCAN-208ENST00000512590 KLHDC7AQ5VTJ3 777 aa8.74□□□□□ -1.01
VCAN-208ENST00000512590 ZNF613Q6PF04 617 aa8.74□□□□□ -1.01
VCAN-208ENST00000512590 GOLM1Q8NBJ4 401 aa8.74□□□□□ -1.01
VCAN-208ENST00000512590 PPTC7Q8NI37 304 aa8.74□□□□□ -1.01
VCAN-208ENST00000512590 PNPT1Q8TCS8 783 aaKnown RBP8.74□□□□□ -1.01
VCAN-208ENST00000512590 ZC3HAV1LQ96H79 300 aaKnown RBP8.74□□□□□ -1.01
VCAN-208ENST00000512590 KLHL5Q96PQ7 755 aa8.74□□□□□ -1.01
VCAN-208ENST00000512590 WDR12Q9GZL7 423 aaKnown RBP8.74□□□□□ -1.01
VCAN-208ENST00000512590 MIOSQ9NXC5 875 aa8.74□□□□□ -1.01
VCAN-208ENST00000512590 MTMR10Q9NXD2 777 aa8.74□□□□□ -1.01
VCAN-208ENST00000512590 ATXN10Q9UBB4 475 aa8.74□□□□□ -1.01
VCAN-208ENST00000512590 PCDHGA10Q9Y5H3 936 aa8.74□□□□□ -1.01
VCAN-208ENST00000512590 A0A0A0MRY4 1105 aa8.74□□□□□ -1.01
VCAN-208ENST00000512590 A0A1B0GVM2 712 aa8.74□□□□□ -1.01
VCAN-208ENST00000512590 TCAF2A6NFQ2 919 aa8.74□□□□□ -1.01
VCAN-208ENST00000512590 NUDT19A8MXV4 375 aa8.74□□□□□ -1.01
VCAN-208ENST00000512590 PI15O43692 258 aa8.74□□□□□ -1.01
VCAN-208ENST00000512590 FGF18O76093 207 aa8.74□□□□□ -1.01
VCAN-208ENST00000512590 LCKP06239 509 aa8.74□□□□□ -1.01
VCAN-208ENST00000512590 FAM228BP0C875 321 aa8.74□□□□□ -1.01
VCAN-208ENST00000512590 RAB4AP20338 218 aa8.74□□□□□ -1.01
VCAN-208ENST00000512590 F2RP25116 425 aa8.74□□□□□ -1.01
VCAN-208ENST00000512590 FMO3P31513 532 aa8.74□□□□□ -1.01
VCAN-208ENST00000512590 MAGEA2P43356 314 aa8.74□□□□□ -1.01
VCAN-208ENST00000512590 CLCNKAP51800 687 aa8.74□□□□□ -1.01
VCAN-208ENST00000512590 NPRL3Q12980 569 aa8.74□□□□□ -1.01
VCAN-208ENST00000512590 SEC23BQ15437 767 aa8.74□□□□□ -1.01
VCAN-208ENST00000512590 IQCHQ86VS3 1027 aa8.74□□□□□ -1.01
VCAN-208ENST00000512590 YIPF7Q8N8F6 280 aa8.74□□□□□ -1.01
VCAN-208ENST00000512590 THEM6Q8WUY1 208 aa8.74□□□□□ -1.01
VCAN-208ENST00000512590 C1GALT1C1Q96EU7 318 aa8.74□□□□□ -1.01
VCAN-208ENST00000512590 PTCD3Q96EY7 689 aaKnown RBP8.74□□□□□ -1.01
VCAN-208ENST00000512590 SH3YL1Q96HL8 342 aaPredicted RBP8.74□□□□□ -1.01
VCAN-208ENST00000512590 APOLD1Q96LR9 279 aa8.74□□□□□ -1.01
VCAN-208ENST00000512590 SPATA13Q96N96 652 aa8.74□□□□□ -1.01
VCAN-208ENST00000512590 CCSER1Q9C0I3 900 aa8.74□□□□□ -1.01
VCAN-208ENST00000512590 THAP2Q9H0W7 228 aa8.74□□□□□ -1.01
VCAN-208ENST00000512590 NOL11Q9H8H0 719 aaKnown RBP8.74□□□□□ -1.01
VCAN-208ENST00000512590 GJB4Q9NTQ9 266 aa8.74□□□□□ -1.01
VCAN-208ENST00000512590 HRASLS2Q9NWW9 162 aa8.74□□□□□ -1.01
VCAN-208ENST00000512590 GRHPRQ9UBQ7 328 aa8.74□□□□□ -1.01
VCAN-208ENST00000512590 A0A1W2PQC6 194 aa8.73□□□□□ -1.01
VCAN-208ENST00000512590 PAGE1O75459 146 aa8.73□□□□□ -1.01
VCAN-208ENST00000512590 OR2B3O76000 313 aa8.73□□□□□ -1.01
VCAN-208ENST00000512590 NTSR2O95665 410 aa8.73□□□□□ -1.01
VCAN-208ENST00000512590 POLR2CP19387 275 aaPredicted RBP8.73□□□□□ -1.01
VCAN-208ENST00000512590 CCND1P24385 295 aa8.73□□□□□ -1.01
VCAN-208ENST00000512590 ADSSP30520 456 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms