RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 TNFRSF10AO00220 468 aa7.29□□□□□ -1.24
PDGFRA-206ENST00000508170 FOXE1O00358 373 aaPredicted RBP7.29□□□□□ -1.24
PDGFRA-206ENST00000508170 WNT10BO00744 389 aa7.29□□□□□ -1.24
PDGFRA-206ENST00000508170 CTDSPLO15194 276 aa7.29□□□□□ -1.24
PDGFRA-206ENST00000508170 GATCO43716 136 aaKnown RBP7.29□□□□□ -1.24
PDGFRA-206ENST00000508170 SCN2BO60939 215 aa7.29□□□□□ -1.24
PDGFRA-206ENST00000508170 ADAM23O75077 832 aa7.29□□□□□ -1.24
PDGFRA-206ENST00000508170 CSF1RP07333 972 aa7.29□□□□□ -1.24
PDGFRA-206ENST00000508170 KRT7P08729 469 aa7.29□□□□□ -1.24
PDGFRA-206ENST00000508170 POLR2CP19387 275 aaPredicted RBP7.29□□□□□ -1.24
PDGFRA-206ENST00000508170 GLDCP23378 1020 aa7.29□□□□□ -1.24
PDGFRA-206ENST00000508170 ECHS1P30084 290 aa7.29□□□□□ -1.24
PDGFRA-206ENST00000508170 HOXC9P31274 260 aa7.29□□□□□ -1.24
PDGFRA-206ENST00000508170 MC3RP41968 323 aa7.29□□□□□ -1.24
PDGFRA-206ENST00000508170 CNN1P51911 297 aaKnown RBP7.29□□□□□ -1.24
PDGFRA-206ENST00000508170 RAB11AP62491 216 aa7.29□□□□□ -1.24
PDGFRA-206ENST00000508170 CSNK2A1P68400 391 aaPredicted RBP7.29□□□□□ -1.24
PDGFRA-206ENST00000508170 CD69Q07108 199 aa7.29□□□□□ -1.24
PDGFRA-206ENST00000508170 CXCL9Q07325 125 aa7.29□□□□□ -1.24
PDGFRA-206ENST00000508170 CAPRIN1Q14444 709 aaKnown RBP7.29□□□□□ -1.24
PDGFRA-206ENST00000508170 RAB11BQ15907 218 aa7.29□□□□□ -1.24
PDGFRA-206ENST00000508170 TBRG1Q3YBR2 411 aa7.29□□□□□ -1.24
PDGFRA-206ENST00000508170 AARS2Q5JTZ9 985 aaKnown RBP7.29□□□□□ -1.24
PDGFRA-206ENST00000508170 PMS2CLQ68D20 193 aa7.29□□□□□ -1.24
PDGFRA-206ENST00000508170 LHX8Q68G74 356 aa7.29□□□□□ -1.24
PDGFRA-206ENST00000508170 GPRIN3Q6ZVF9 776 aa7.29□□□□□ -1.24
PDGFRA-206ENST00000508170 GPR180Q86V85 440 aa7.29□□□□□ -1.24
PDGFRA-206ENST00000508170 HJURPQ8NCD3 748 aaPredicted RBP7.29□□□□□ -1.24
PDGFRA-206ENST00000508170 CSNK2A3Q8NEV1 391 aa7.29□□□□□ -1.24
PDGFRA-206ENST00000508170 MMS19Q96T76 1030 aa7.29□□□□□ -1.24
PDGFRA-206ENST00000508170 WACQ9BTA9 647 aa7.29□□□□□ -1.24
PDGFRA-206ENST00000508170 SGPP1Q9BX95 441 aa7.29□□□□□ -1.24
PDGFRA-206ENST00000508170 DERL2Q9GZP9 239 aa7.29□□□□□ -1.24
PDGFRA-206ENST00000508170 SIRPDQ9H106 197 aa7.29□□□□□ -1.24
PDGFRA-206ENST00000508170 PDZD7Q9H5P4 517 aa7.29□□□□□ -1.24
PDGFRA-206ENST00000508170 ASB8Q9H765 288 aa7.29□□□□□ -1.24
PDGFRA-206ENST00000508170 NOL11Q9H8H0 719 aaKnown RBP7.29□□□□□ -1.24
PDGFRA-206ENST00000508170 MS4A12Q9NXJ0 267 aa7.29□□□□□ -1.24
PDGFRA-206ENST00000508170 SCML1Q9UN30 329 aa7.29□□□□□ -1.24
PDGFRA-206ENST00000508170 PCDHA12Q9UN75 941 aa7.29□□□□□ -1.24
PDGFRA-206ENST00000508170 AP3M1Q9Y2T2 418 aa7.29□□□□□ -1.24
PDGFRA-206ENST00000508170 RBMX2Q9Y388 322 aaKnown RBP7.29□□□□□ -1.24
PDGFRA-206ENST00000508170 MROH2AA6NES4 1674 aa7.29□□□□□ -1.24
PDGFRA-206ENST00000508170 A0A1B0GUH1 482 aa7.29□□□□□ -1.24
PDGFRA-206ENST00000508170 BCLAF3A2AJT9 711 aaKnown RBP7.29□□□□□ -1.24
PDGFRA-206ENST00000508170 SMCO2A6NFE2 343 aa7.29□□□□□ -1.24
PDGFRA-206ENST00000508170 PDZK1P1A8MUH7 402 aa7.29□□□□□ -1.24
PDGFRA-206ENST00000508170 ANKRD66B4E2M5 251 aa7.29□□□□□ -1.24
PDGFRA-206ENST00000508170 NDUFS3O75489 264 aa7.29□□□□□ -1.24
PDGFRA-206ENST00000508170 WDR47O94967 919 aa7.29□□□□□ -1.24
PDGFRA-206ENST00000508170 STSP08842 583 aa7.29□□□□□ -1.24
PDGFRA-206ENST00000508170 UBTFL1P0CB47 393 aaPredicted RBP7.29□□□□□ -1.24
PDGFRA-206ENST00000508170 PAICSP22234 425 aaKnown RBP7.29□□□□□ -1.24
PDGFRA-206ENST00000508170 HLA-FP30511 346 aa7.29□□□□□ -1.24
PDGFRA-206ENST00000508170 LRPAP1P30533 357 aa7.29□□□□□ -1.24
PDGFRA-206ENST00000508170 PTPN7P35236 360 aa7.29□□□□□ -1.24
PDGFRA-206ENST00000508170 CSNK1DP48730 415 aa7.29□□□□□ -1.24
PDGFRA-206ENST00000508170 ANTXR2P58335 489 aa7.29□□□□□ -1.24
PDGFRA-206ENST00000508170 PRPS1P60891 318 aa7.29□□□□□ -1.24
PDGFRA-206ENST00000508170 CNTN2Q02246 1040 aa7.29□□□□□ -1.24
PDGFRA-206ENST00000508170 ID3Q02535 119 aa7.29□□□□□ -1.24
PDGFRA-206ENST00000508170 CYP24A1Q07973 514 aa7.29□□□□□ -1.24
PDGFRA-206ENST00000508170 DLG2Q15700 870 aa7.29□□□□□ -1.24
PDGFRA-206ENST00000508170 SGSM1Q2NKQ1 1148 aa7.29□□□□□ -1.24
PDGFRA-206ENST00000508170 USP41Q3LFD5 358 aa7.29□□□□□ -1.24
PDGFRA-206ENST00000508170 ZNF569Q5MCW4 686 aa7.29□□□□□ -1.24
PDGFRA-206ENST00000508170 PLA2G2CQ5R387 149 aa7.29□□□□□ -1.24
PDGFRA-206ENST00000508170 PDZK1Q5T2W1 519 aa7.29□□□□□ -1.24
PDGFRA-206ENST00000508170 PRAMEF7Q5VXH5 474 aa7.29□□□□□ -1.24
PDGFRA-206ENST00000508170 FAM171BQ6P995 826 aa7.29□□□□□ -1.24
PDGFRA-206ENST00000508170 FAM180AQ6UWF9 173 aa7.29□□□□□ -1.24
PDGFRA-206ENST00000508170 CCDC121Q6ZUS5 278 aa7.29□□□□□ -1.24
PDGFRA-206ENST00000508170 PAQR9Q6ZVX9 377 aa7.29□□□□□ -1.24
PDGFRA-206ENST00000508170 FAM122BQ7Z309 247 aa7.29□□□□□ -1.24
PDGFRA-206ENST00000508170 RNF169Q8NCN4 708 aa7.29□□□□□ -1.24
PDGFRA-206ENST00000508170 FAM71CQ8NEG0 241 aa7.29□□□□□ -1.24
PDGFRA-206ENST00000508170 NUDT10Q8NFP7 164 aa7.29□□□□□ -1.24
PDGFRA-206ENST00000508170 DQX1Q8TE96 717 aaKnown RBP7.29□□□□□ -1.24
PDGFRA-206ENST00000508170 ZNF516Q92618 1163 aa7.29□□□□□ -1.24
PDGFRA-206ENST00000508170 TOE1Q96GM8 510 aaKnown RBP7.29□□□□□ -1.24
PDGFRA-206ENST00000508170 LRRC1Q9BTT6 524 aa7.29□□□□□ -1.24
PDGFRA-206ENST00000508170 BDH2Q9BUT1 245 aa7.29□□□□□ -1.24
PDGFRA-206ENST00000508170 FOXQ1Q9C009 403 aa7.29□□□□□ -1.24
PDGFRA-206ENST00000508170 ZNF160Q9HCG1 818 aa7.29□□□□□ -1.24
PDGFRA-206ENST00000508170 C20orf141Q9NUB4 165 aa7.29□□□□□ -1.24
PDGFRA-206ENST00000508170 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.29□□□□□ -1.24
PDGFRA-206ENST00000508170 NCKIPSDQ9NZQ3 722 aa7.29□□□□□ -1.24
PDGFRA-206ENST00000508170 ADGRB3O60242 1522 aa7.29□□□□□ -1.24
PDGFRA-206ENST00000508170 SF3B1O75533 1304 aaKnown RBP eCLIP7.28□□□□□ -1.24
PDGFRA-206ENST00000508170 TMEM191CA6NGB0 347 aa7.28□□□□□ -1.24
PDGFRA-206ENST00000508170 ARGFXA6NJG6 315 aa7.28□□□□□ -1.24
PDGFRA-206ENST00000508170 ITGB1BP1O14713 200 aa7.28□□□□□ -1.24
PDGFRA-206ENST00000508170 KCNN4O15554 427 aa7.28□□□□□ -1.24
PDGFRA-206ENST00000508170 GPAA1O43292 621 aa7.28□□□□□ -1.24
PDGFRA-206ENST00000508170 GRID2O43424 1007 aa7.28□□□□□ -1.24
PDGFRA-206ENST00000508170 WIPF1O43516 503 aa7.28□□□□□ -1.24
PDGFRA-206ENST00000508170 ATP8B1O43520 1251 aa7.28□□□□□ -1.24
PDGFRA-206ENST00000508170 ATG13O75143 517 aa7.28□□□□□ -1.24
PDGFRA-206ENST00000508170 TOMM70O94826 608 aa7.28□□□□□ -1.24
PDGFRA-206ENST00000508170 RAB3DO95716 219 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms