RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 HCAR2Q8TDS4 363 aa11.29□□□□□ -0.6
USP46-204ENST00000503060 DEPDC7Q96QD5 511 aa11.29□□□□□ -0.6
USP46-204ENST00000503060 HBEGFQ99075 208 aa11.29□□□□□ -0.6
USP46-204ENST00000503060 SARGQ9BW04 601 aa11.29□□□□□ -0.6
USP46-204ENST00000503060 TMEM45AQ9NWC5 275 aa11.29□□□□□ -0.6
USP46-204ENST00000503060 ABCD2Q9UBJ2 740 aa11.29□□□□□ -0.6
USP46-204ENST00000503060 PDE10AQ9Y233 779 aa11.29□□□□□ -0.6
USP46-204ENST00000503060 SLC27A6Q9Y2P4 619 aa11.29□□□□□ -0.6
USP46-204ENST00000503060 NUP210Q8TEM1 1887 aaPredicted RBP11.29□□□□□ -0.6
USP46-204ENST00000503060 FAM234BA2RU67 622 aa11.29□□□□□ -0.6
USP46-204ENST00000503060 ASPDHA6ND91 283 aa11.29□□□□□ -0.6
USP46-204ENST00000503060 C16orf96A6NNT2 1141 aa11.29□□□□□ -0.6
USP46-204ENST00000503060 NME4O00746 187 aa11.29□□□□□ -0.6
USP46-204ENST00000503060 TULP3O75386 442 aa11.29□□□□□ -0.6
USP46-204ENST00000503060 MTX2O75431 263 aa11.29□□□□□ -0.6
USP46-204ENST00000503060 FESP07332 822 aa11.29□□□□□ -0.6
USP46-204ENST00000503060 C8GP07360 202 aa11.29□□□□□ -0.6
USP46-204ENST00000503060 CA3P07451 260 aa11.29□□□□□ -0.6
USP46-204ENST00000503060 ENO2P09104 434 aaPredicted RBP11.29□□□□□ -0.6
USP46-204ENST00000503060 MSH3P20585 1137 aa11.29□□□□□ -0.6
USP46-204ENST00000503060 PIK3CGP48736 1102 aa11.29□□□□□ -0.6
USP46-204ENST00000503060 POLR2JP52435 117 aaKnown RBP11.29□□□□□ -0.6
USP46-204ENST00000503060 ST8SIA6P61647 398 aa11.29□□□□□ -0.6
USP46-204ENST00000503060 CDKL1Q00532 357 aa11.29□□□□□ -0.6
USP46-204ENST00000503060 FOXM1Q08050 763 aa11.29□□□□□ -0.6
USP46-204ENST00000503060 NR6A1Q15406 480 aa11.29□□□□□ -0.6
USP46-204ENST00000503060 C6orf10Q5SRN2 563 aa11.29□□□□□ -0.6
USP46-204ENST00000503060 SERPINA13PQ6UXR4 307 aa11.29□□□□□ -0.6
USP46-204ENST00000503060 INTS12Q96CB8 462 aaKnown RBP11.29□□□□□ -0.6
USP46-204ENST00000503060 LRRC58Q96CX6 371 aa11.29□□□□□ -0.6
USP46-204ENST00000503060 LRGUKQ96M69 825 aa11.29□□□□□ -0.6
USP46-204ENST00000503060 NTMT1Q9BV86 223 aa11.29□□□□□ -0.6
USP46-204ENST00000503060 RIOK2Q9BVS4 552 aaKnown RBP11.29□□□□□ -0.6
USP46-204ENST00000503060 SLC12A9Q9BXP2 914 aa11.29□□□□□ -0.6
USP46-204ENST00000503060 ARL15Q9NXU5 204 aa11.29□□□□□ -0.6
USP46-204ENST00000503060 NKIRAS2Q9NYR9 191 aa11.29□□□□□ -0.6
USP46-204ENST00000503060 GMPR2Q9P2T1 348 aaKnown RBP11.29□□□□□ -0.6
USP46-204ENST00000503060 TRPS1Q9UHF7 1281 aa11.29□□□□□ -0.6
USP46-204ENST00000503060 RIMS3Q9UJD0 308 aa11.29□□□□□ -0.6
USP46-204ENST00000503060 PLXNA2O75051 1894 aa11.28□□□□□ -0.6
USP46-204ENST00000503060 EIF4E1BA6NMX2 242 aaKnown RBP11.28□□□□□ -0.6
USP46-204ENST00000503060 EEDO75530 441 aaKnown RBP11.28□□□□□ -0.6
USP46-204ENST00000503060 WDR47O94967 919 aa11.28□□□□□ -0.6
USP46-204ENST00000503060 AP2A2O94973 939 aa11.28□□□□□ -0.6
USP46-204ENST00000503060 EBLN1P0CF75 366 aa11.28□□□□□ -0.6
USP46-204ENST00000503060 BOP1Q14137 746 aaKnown RBP11.28□□□□□ -0.6
USP46-204ENST00000503060 CAPRIN1Q14444 709 aaKnown RBP11.28□□□□□ -0.6
USP46-204ENST00000503060 AP5B1Q2VPB7 878 aa11.28□□□□□ -0.6
USP46-204ENST00000503060 POM121L1PQ3SYA9 428 aa11.28□□□□□ -0.6
USP46-204ENST00000503060 HENMT1Q5T8I9 393 aaKnown RBP11.28□□□□□ -0.6
USP46-204ENST00000503060 TTC23LQ6PF05 361 aa11.28□□□□□ -0.6
USP46-204ENST00000503060 TMC5Q6UXY8 1006 aa11.28□□□□□ -0.6
USP46-204ENST00000503060 RNF165Q6ZSG1 346 aa11.28□□□□□ -0.6
USP46-204ENST00000503060 TECPR1Q7Z6L1 1165 aa11.28□□□□□ -0.6
USP46-204ENST00000503060 TMEM126BQ8IUX1 230 aa11.28□□□□□ -0.6
USP46-204ENST00000503060 VRK3Q8IV63 474 aa11.28□□□□□ -0.6
USP46-204ENST00000503060 SPARTQ8N0X7 666 aa11.28□□□□□ -0.6
USP46-204ENST00000503060 NAXEQ8NCW5 288 aa11.28□□□□□ -0.6
USP46-204ENST00000503060 DDHD1Q8NEL9 900 aa11.28□□□□□ -0.6
USP46-204ENST00000503060 UCMAQ8WVF2 138 aa11.28□□□□□ -0.6
USP46-204ENST00000503060 ASB11Q8WXH4 323 aa11.28□□□□□ -0.6
USP46-204ENST00000503060 PPP2R3CQ969Q6 453 aa11.28□□□□□ -0.6
USP46-204ENST00000503060 VPS33AQ96AX1 596 aa11.28□□□□□ -0.6
USP46-204ENST00000503060 ZSCAN5AQ9BUG6 496 aa11.28□□□□□ -0.6
USP46-204ENST00000503060 TRIM54Q9BYV2 358 aa11.28□□□□□ -0.6
USP46-204ENST00000503060 COPS7BQ9H9Q2 264 aaPredicted RBP11.28□□□□□ -0.6
USP46-204ENST00000503060 PARVBQ9HBI1 364 aa11.28□□□□□ -0.6
USP46-204ENST00000503060 RNF11Q9Y3C5 154 aa11.28□□□□□ -0.6
USP46-204ENST00000503060 CCL27Q9Y4X3 112 aa11.28□□□□□ -0.6
USP46-204ENST00000503060 CCDC154A6NI56 674 aa11.28□□□□□ -0.6
USP46-204ENST00000503060 FADS2P1A8MWK0 482 aa11.28□□□□□ -0.6
USP46-204ENST00000503060 LOC730098B7Z3J9 87 aa11.28□□□□□ -0.6
USP46-204ENST00000503060 ALG1L2C9J202 215 aa11.28□□□□□ -0.6
USP46-204ENST00000503060 FFAR3O14843 346 aa11.28□□□□□ -0.6
USP46-204ENST00000503060 KPNA5O15131 536 aa11.28□□□□□ -0.6
USP46-204ENST00000503060 GPR42O15529 346 aa11.28□□□□□ -0.6
USP46-204ENST00000503060 DNAJA2O60884 412 aa11.28□□□□□ -0.6
USP46-204ENST00000503060 SLC6A2P23975 617 aa11.28□□□□□ -0.6
USP46-204ENST00000503060 IL12AP29459 219 aa11.28□□□□□ -0.6
USP46-204ENST00000503060 CSTF2P33240 577 aaKnown RBP eCLIP11.28□□□□□ -0.6
USP46-204ENST00000503060 GGT5P36269 586 aa11.28□□□□□ -0.6
USP46-204ENST00000503060 MMP12P39900 470 aa11.28□□□□□ -0.6
USP46-204ENST00000503060 AQP4P55087 323 aa11.28□□□□□ -0.6
USP46-204ENST00000503060 DAB2P98082 770 aa11.28□□□□□ -0.6
USP46-204ENST00000503060 RHDQ02161 417 aa11.28□□□□□ -0.6
USP46-204ENST00000503060 NFYCQ13952 458 aa11.28□□□□□ -0.6
USP46-204ENST00000503060 TLR1Q15399 786 aa11.28□□□□□ -0.6
USP46-204ENST00000503060 STK11Q15831 433 aa11.28□□□□□ -0.6
USP46-204ENST00000503060 ZNF284Q2VY69 593 aa11.28□□□□□ -0.6
USP46-204ENST00000503060 GFOD2Q3B7J2 385 aa11.28□□□□□ -0.6
USP46-204ENST00000503060 FAM78AQ5JUQ0 283 aa11.28□□□□□ -0.6
USP46-204ENST00000503060 CWF19L1Q69YN2 538 aaKnown RBP11.28□□□□□ -0.6
USP46-204ENST00000503060 FAM109BQ6ICB4 259 aaPredicted RBP11.28□□□□□ -0.6
USP46-204ENST00000503060 PARS2Q7L3T8 475 aaKnown RBP11.28□□□□□ -0.6
USP46-204ENST00000503060 ETFBKMTQ8IXQ9 262 aa11.28□□□□□ -0.6
USP46-204ENST00000503060 LILRA2Q8N149 483 aa11.28□□□□□ -0.6
USP46-204ENST00000503060 TCAIMQ8N3R3 496 aa11.28□□□□□ -0.6
USP46-204ENST00000503060 PROKR1Q8TCW9 393 aa11.28□□□□□ -0.6
USP46-204ENST00000503060 SKA2Q8WVK7 121 aaPredicted RBP11.28□□□□□ -0.6
USP46-204ENST00000503060 RADILQ96JH8 1075 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms