RNA–Protein interactions for RNA: ENST00000498212.1

HMGXB4-207, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-207ENST00000498212 KLHL20Q9Y2M5 609 aa8.16□□□□□ -1.1
HMGXB4-207ENST00000498212 CRYL1Q9Y2S2 319 aa8.16□□□□□ -1.1
HMGXB4-207ENST00000498212 ZNF462Q96JM2 2506 aa8.15□□□□□ -1.1
HMGXB4-207ENST00000498212 MAGEB16A2A368 324 aa8.15□□□□□ -1.1
HMGXB4-207ENST00000498212 SDR42E2A6NKP2 422 aa8.15□□□□□ -1.1
HMGXB4-207ENST00000498212 E5RI56 91 aa8.15□□□□□ -1.1
HMGXB4-207ENST00000498212 K7EM74 188 aa8.15□□□□□ -1.1
HMGXB4-207ENST00000498212 CES2O00748 559 aa8.15□□□□□ -1.1
HMGXB4-207ENST00000498212 PHF2O75151 1096 aa8.15□□□□□ -1.1
HMGXB4-207ENST00000498212 MATN4O95460 622 aa8.15□□□□□ -1.1
HMGXB4-207ENST00000498212 CTSBP07858 339 aa8.15□□□□□ -1.1
HMGXB4-207ENST00000498212 CD63P08962 238 aa8.15□□□□□ -1.1
HMGXB4-207ENST00000498212 CBSLP0DN79 551 aa8.15□□□□□ -1.1
HMGXB4-207ENST00000498212 PKMP14618 531 aaKnown RBP8.15□□□□□ -1.1
HMGXB4-207ENST00000498212 ATP5DP30049 168 aa8.15□□□□□ -1.1
HMGXB4-207ENST00000498212 CBSP35520 551 aa8.15□□□□□ -1.1
HMGXB4-207ENST00000498212 FNTAP49354 379 aa8.15□□□□□ -1.1
HMGXB4-207ENST00000498212 CCL11P51671 97 aa8.15□□□□□ -1.1
HMGXB4-207ENST00000498212 DCDP81605 110 aaKnown RBP8.15□□□□□ -1.1
HMGXB4-207ENST00000498212 CHAF1BQ13112 559 aa8.15□□□□□ -1.1
HMGXB4-207ENST00000498212 THOC5Q13769 683 aaKnown RBP8.15□□□□□ -1.1
HMGXB4-207ENST00000498212 GBX1Q14549 363 aa8.15□□□□□ -1.1
HMGXB4-207ENST00000498212 SF1Q15637 639 aaKnown RBP8.15□□□□□ -1.1
HMGXB4-207ENST00000498212 CCSMST1Q4G0I0 132 aa8.15□□□□□ -1.1
HMGXB4-207ENST00000498212 ANKRD20A4Q4UJ75 823 aa8.15□□□□□ -1.1
HMGXB4-207ENST00000498212 ZC3H12BQ5HYM0 836 aaKnown RBP8.15□□□□□ -1.1
HMGXB4-207ENST00000498212 C1orf189Q5VU69 101 aa8.15□□□□□ -1.1
HMGXB4-207ENST00000498212 FAM69BQ5VUD6 431 aa8.15□□□□□ -1.1
HMGXB4-207ENST00000498212 MLIPQ5VWP3 458 aa8.15□□□□□ -1.1
HMGXB4-207ENST00000498212 FCRL6Q6DN72 434 aa8.15□□□□□ -1.1
HMGXB4-207ENST00000498212 ZNF470Q6ECI4 717 aa8.15□□□□□ -1.1
HMGXB4-207ENST00000498212 NEPROQ6NW34 567 aa8.15□□□□□ -1.1
HMGXB4-207ENST00000498212 FIGLAQ6QHK4 219 aa8.15□□□□□ -1.1
HMGXB4-207ENST00000498212 CENPUQ71F23 418 aa8.15□□□□□ -1.1
HMGXB4-207ENST00000498212 RAB43Q86YS6 212 aa8.15□□□□□ -1.1
HMGXB4-207ENST00000498212 TEX19Q8NA77 164 aa8.15□□□□□ -1.1
HMGXB4-207ENST00000498212 DLG3Q92796 817 aa8.15□□□□□ -1.1
HMGXB4-207ENST00000498212 FAM136AQ96C01 138 aa8.15□□□□□ -1.1
HMGXB4-207ENST00000498212 GBP5Q96PP8 586 aa8.15□□□□□ -1.1
HMGXB4-207ENST00000498212 TRIM56Q9BRZ2 755 aaKnown RBP8.15□□□□□ -1.1
HMGXB4-207ENST00000498212 NDC1Q9BTX1 674 aa8.15□□□□□ -1.1
HMGXB4-207ENST00000498212 SLC25A23Q9BV35 468 aa8.15□□□□□ -1.1
HMGXB4-207ENST00000498212 EURLQ9NYK6 297 aa8.15□□□□□ -1.1
HMGXB4-207ENST00000498212 SPATA7Q9P0W8 599 aa8.15□□□□□ -1.1
HMGXB4-207ENST00000498212 IFT80Q9P2H3 777 aaPredicted RBP8.15□□□□□ -1.1
HMGXB4-207ENST00000498212 DHCR7Q9UBM7 475 aaKnown RBP8.15□□□□□ -1.1
HMGXB4-207ENST00000498212 NDOR1Q9UHB4 597 aa8.15□□□□□ -1.1
HMGXB4-207ENST00000498212 TSR3Q9UJK0 312 aaKnown RBP8.15□□□□□ -1.1
HMGXB4-207ENST00000498212 SNX12Q9UMY4 172 aa8.15□□□□□ -1.1
HMGXB4-207ENST00000498212 NEU2Q9Y3R4 380 aa8.15□□□□□ -1.1
HMGXB4-207ENST00000498212 CFAP46Q8IYW2 2715 aa8.15□□□□□ -1.11
HMGXB4-207ENST00000498212 ZCWPW2A0A1B0GU75 182 aa8.14□□□□□ -1.11
HMGXB4-207ENST00000498212 CTAGE9A4FU28 777 aa8.14□□□□□ -1.11
HMGXB4-207ENST00000498212 KRT87PA6NCN2 255 aa8.14□□□□□ -1.11
HMGXB4-207ENST00000498212 TARM1B6A8C7 271 aa8.14□□□□□ -1.11
HMGXB4-207ENST00000498212 ZNF185O15231 689 aa8.14□□□□□ -1.11
HMGXB4-207ENST00000498212 PRICKLE3O43900 615 aaPredicted RBP8.14□□□□□ -1.11
HMGXB4-207ENST00000498212 KIF5CO60282 957 aa8.14□□□□□ -1.11
HMGXB4-207ENST00000498212 USP1O94782 785 aa8.14□□□□□ -1.11
HMGXB4-207ENST00000498212 FKBP9O95302 570 aa8.14□□□□□ -1.11
HMGXB4-207ENST00000498212 PDGFAP04085 211 aa8.14□□□□□ -1.11
HMGXB4-207ENST00000498212 PSMB5P28074 263 aa8.14□□□□□ -1.11
HMGXB4-207ENST00000498212 FOLR3P41439 243 aa8.14□□□□□ -1.11
HMGXB4-207ENST00000498212 GRIA3P42263 894 aa8.14□□□□□ -1.11
HMGXB4-207ENST00000498212 MAGEA3P43357 314 aa8.14□□□□□ -1.11
HMGXB4-207ENST00000498212 PGDP52209 483 aa8.14□□□□□ -1.11
HMGXB4-207ENST00000498212 ARSFP54793 590 aa8.14□□□□□ -1.11
HMGXB4-207ENST00000498212 RRADP55042 308 aa8.14□□□□□ -1.11
HMGXB4-207ENST00000498212 SSPNQ14714 243 aa8.14□□□□□ -1.11
HMGXB4-207ENST00000498212 SLC9A5Q14940 896 aa8.14□□□□□ -1.11
HMGXB4-207ENST00000498212 PPP1R7Q15435 360 aa8.14□□□□□ -1.11
HMGXB4-207ENST00000498212 LONRF1Q17RB8 773 aa8.14□□□□□ -1.11
HMGXB4-207ENST00000498212 KLHL38Q2WGJ6 581 aa8.14□□□□□ -1.11
HMGXB4-207ENST00000498212 NKAIN1Q4KMZ8 207 aa8.14□□□□□ -1.11
HMGXB4-207ENST00000498212 ACSBG2Q5FVE4 666 aa8.14□□□□□ -1.11
HMGXB4-207ENST00000498212 COLEC12Q5KU26 742 aa8.14□□□□□ -1.11
HMGXB4-207ENST00000498212 ADGRD1Q6QNK2 874 aa8.14□□□□□ -1.11
HMGXB4-207ENST00000498212 MED25Q71SY5 747 aa8.14□□□□□ -1.11
HMGXB4-207ENST00000498212 MCATQ8IVS2 390 aaKnown RBP8.14□□□□□ -1.11
HMGXB4-207ENST00000498212 LMNTD2Q8IXW0 634 aa8.14□□□□□ -1.11
HMGXB4-207ENST00000498212 PPIL6Q8IXY8 311 aa8.14□□□□□ -1.11
HMGXB4-207ENST00000498212 ZBTB2Q8N680 514 aa8.14□□□□□ -1.11
HMGXB4-207ENST00000498212 NAT8LQ8N9F0 302 aa8.14□□□□□ -1.11
HMGXB4-207ENST00000498212 TMEM102Q8N9M5 508 aaPredicted RBP8.14□□□□□ -1.11
HMGXB4-207ENST00000498212 HMGCLL1Q8TB92 370 aa8.14□□□□□ -1.11
HMGXB4-207ENST00000498212 CALML6Q8TD86 181 aa8.14□□□□□ -1.11
HMGXB4-207ENST00000498212 DENND1AQ8TEH3 1009 aa8.14□□□□□ -1.11
HMGXB4-207ENST00000498212 ZUFSPQ96AP4 578 aa8.14□□□□□ -1.11
HMGXB4-207ENST00000498212 MIPEPQ99797 713 aa8.14□□□□□ -1.11
HMGXB4-207ENST00000498212 CCDC68Q9H2F9 335 aa8.14□□□□□ -1.11
HMGXB4-207ENST00000498212 FBXO6Q9NRD1 293 aaPredicted RBP8.14□□□□□ -1.11
HMGXB4-207ENST00000498212 TRMT1Q9NXH9 659 aaKnown RBP8.14□□□□□ -1.11
HMGXB4-207ENST00000498212 GALPQ9UBC7 116 aa8.14□□□□□ -1.11
HMGXB4-207ENST00000498212 G3BP2Q9UN86 482 aaKnown RBP8.14□□□□□ -1.11
HMGXB4-207ENST00000498212 PCDHGA9Q9Y5G4 932 aaKnown RBP8.14□□□□□ -1.11
HMGXB4-207ENST00000498212 MAD1L1Q9Y6D9 718 aa8.14□□□□□ -1.11
HMGXB4-207ENST00000498212 A0A1B0GX78 115 aa8.13□□□□□ -1.11
HMGXB4-207ENST00000498212 A0A1W2PPV9 198 aa8.13□□□□□ -1.11
HMGXB4-207ENST00000498212 ARHGEF33A8MVX0 844 aa8.13□□□□□ -1.11
HMGXB4-207ENST00000498212 PSIP1O75475 530 aaKnown RBP8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms