RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 ZMIZ2Q8NF64 920 aa12.76□□□□□ -0.37
GAPVD1-220ENST00000497580 OR2T29Q8NH02 315 aa12.76□□□□□ -0.37
GAPVD1-220ENST00000497580 STAG3L4Q8TBR4 150 aa12.76□□□□□ -0.37
GAPVD1-220ENST00000497580 DPY30Q9C005 99 aa12.76□□□□□ -0.37
GAPVD1-220ENST00000497580 NDFIP2Q9NV92 336 aa12.76□□□□□ -0.37
GAPVD1-220ENST00000497580 MPP6Q9NZW5 540 aa12.76□□□□□ -0.37
GAPVD1-220ENST00000497580 ZNF225Q9UK10 706 aa12.76□□□□□ -0.37
GAPVD1-220ENST00000497580 LEUTXA8MZ59 168 aa12.76□□□□□ -0.37
GAPVD1-220ENST00000497580 SCELO95171 688 aa12.76□□□□□ -0.37
GAPVD1-220ENST00000497580 ETV3P41162 512 aa12.76□□□□□ -0.37
GAPVD1-220ENST00000497580 RUNX1T1Q06455 604 aa12.76□□□□□ -0.37
GAPVD1-220ENST00000497580 MRPL28Q13084 256 aaKnown RBP12.76□□□□□ -0.37
GAPVD1-220ENST00000497580 PYDC2Q56P42 97 aa12.76□□□□□ -0.37
GAPVD1-220ENST00000497580 ZNF549Q6P9A3 640 aa12.76□□□□□ -0.37
GAPVD1-220ENST00000497580 Q6ZSR9 355 aa12.76□□□□□ -0.37
GAPVD1-220ENST00000497580 C16orf62Q7Z3J2 963 aa12.76□□□□□ -0.37
GAPVD1-220ENST00000497580 PHC2Q8IXK0 858 aa12.76□□□□□ -0.37
GAPVD1-220ENST00000497580 ENTHD1Q8IYW4 607 aa12.76□□□□□ -0.37
GAPVD1-220ENST00000497580 PGBD5Q8N414 524 aa12.76□□□□□ -0.37
GAPVD1-220ENST00000497580 OR4M1Q8NGD0 313 aa12.76□□□□□ -0.37
GAPVD1-220ENST00000497580 TRMT61AQ96FX7 289 aaKnown RBP12.76□□□□□ -0.37
GAPVD1-220ENST00000497580 SLC39A13Q96H72 371 aa12.76□□□□□ -0.37
GAPVD1-220ENST00000497580 PYURFQ96I23 114 aa12.76□□□□□ -0.37
GAPVD1-220ENST00000497580 OR52E6Q96RD3 313 aa12.76□□□□□ -0.37
GAPVD1-220ENST00000497580 FCRL5Q96RD9 977 aa12.76□□□□□ -0.37
GAPVD1-220ENST00000497580 SLC22A4Q9H015 551 aa12.76□□□□□ -0.37
GAPVD1-220ENST00000497580 C11orf54Q9H0W9 315 aaPredicted RBP12.76□□□□□ -0.37
GAPVD1-220ENST00000497580 GLTPQ9NZD2 209 aa12.76□□□□□ -0.37
GAPVD1-220ENST00000497580 MYCP01106 439 aaPredicted RBP12.75□□□□□ -0.37
GAPVD1-220ENST00000497580 COL6A1P12109 1028 aa12.75□□□□□ -0.37
GAPVD1-220ENST00000497580 INSRRP14616 1297 aa12.75□□□□□ -0.37
GAPVD1-220ENST00000497580 ERP29P30040 261 aaKnown RBP12.75□□□□□ -0.37
GAPVD1-220ENST00000497580 SCN1BQ07699 218 aa12.75□□□□□ -0.37
GAPVD1-220ENST00000497580 PLET1Q6UQ28 207 aa12.75□□□□□ -0.37
GAPVD1-220ENST00000497580 GALNT7Q86SF2 657 aa12.75□□□□□ -0.37
GAPVD1-220ENST00000497580 CCDC190Q86UF4 302 aa12.75□□□□□ -0.37
GAPVD1-220ENST00000497580 ZFAND1Q8TCF1 268 aa12.75□□□□□ -0.37
GAPVD1-220ENST00000497580 IPCEF1Q8WWN9 437 aaPredicted RBP12.75□□□□□ -0.37
GAPVD1-220ENST00000497580 ZNF599Q96NL3 588 aa12.75□□□□□ -0.37
GAPVD1-220ENST00000497580 CCDC32Q9BV29 185 aa12.75□□□□□ -0.37
GAPVD1-220ENST00000497580 SLC39A8Q9C0K1 460 aa12.75□□□□□ -0.37
GAPVD1-220ENST00000497580 GORASP2Q9H8Y8 452 aa12.75□□□□□ -0.37
GAPVD1-220ENST00000497580 SLC23A1Q9UHI7 598 aa12.75□□□□□ -0.37
GAPVD1-220ENST00000497580 BRCA2P51587 3418 aa12.75□□□□□ -0.37
GAPVD1-220ENST00000497580 SCAMP3O14828 347 aaKnown RBP12.75□□□□□ -0.37
GAPVD1-220ENST00000497580 SERPINI2O75830 405 aa12.75□□□□□ -0.37
GAPVD1-220ENST00000497580 GLP2RO95838 553 aa12.75□□□□□ -0.37
GAPVD1-220ENST00000497580 GSTM1P09488 218 aa12.75□□□□□ -0.37
GAPVD1-220ENST00000497580 AQP1P29972 269 aa12.75□□□□□ -0.37
GAPVD1-220ENST00000497580 RGS6P49758 472 aa12.75□□□□□ -0.37
GAPVD1-220ENST00000497580 CAPN13Q6MZZ7 669 aaPredicted RBP12.75□□□□□ -0.37
GAPVD1-220ENST00000497580 SHQ1Q6PI26 577 aaKnown RBP12.75□□□□□ -0.37
GAPVD1-220ENST00000497580 OR56A4Q8NGH8 313 aa12.75□□□□□ -0.37
GAPVD1-220ENST00000497580 OR13C4Q8NGS5 318 aa12.75□□□□□ -0.37
GAPVD1-220ENST00000497580 MYDGFQ969H8 173 aa12.75□□□□□ -0.37
GAPVD1-220ENST00000497580 MTFMTQ96DP5 389 aaKnown RBP12.75□□□□□ -0.37
GAPVD1-220ENST00000497580 MTERF3Q96E29 417 aa12.75□□□□□ -0.37
GAPVD1-220ENST00000497580 OR5M11Q96RB7 305 aa12.75□□□□□ -0.37
GAPVD1-220ENST00000497580 ATOH8Q96SQ7 321 aa12.75□□□□□ -0.37
GAPVD1-220ENST00000497580 C17orf62Q9BQA9 187 aa12.75□□□□□ -0.37
GAPVD1-220ENST00000497580 FAM83DQ9H4H8 585 aa12.75□□□□□ -0.37
GAPVD1-220ENST00000497580 IL1RAPQ9NPH3 570 aa12.75□□□□□ -0.37
GAPVD1-220ENST00000497580 DCAF13Q9NV06 445 aaKnown RBP12.75□□□□□ -0.37
GAPVD1-220ENST00000497580 HOXC10Q9NYD6 342 aa12.75□□□□□ -0.37
GAPVD1-220ENST00000497580 FBXW11Q9UKB1 542 aa12.75□□□□□ -0.37
GAPVD1-220ENST00000497580 COL1A2P08123 1366 aa12.75□□□□□ -0.37
GAPVD1-220ENST00000497580 ADORA3P0DMS8 318 aa12.75□□□□□ -0.37
GAPVD1-220ENST00000497580 M6PRP20645 277 aa12.75□□□□□ -0.37
GAPVD1-220ENST00000497580 DSC2Q02487 901 aa12.75□□□□□ -0.37
GAPVD1-220ENST00000497580 ST3GAL4Q11206 333 aa12.75□□□□□ -0.37
GAPVD1-220ENST00000497580 NPRL3Q12980 569 aa12.75□□□□□ -0.37
GAPVD1-220ENST00000497580 RUNDC3AQ59EK9 446 aa12.75□□□□□ -0.37
GAPVD1-220ENST00000497580 AADATQ8N5Z0 425 aa12.75□□□□□ -0.37
GAPVD1-220ENST00000497580 OR52J3Q8NH60 311 aa12.75□□□□□ -0.37
GAPVD1-220ENST00000497580 ASB15Q8WXK1 588 aa12.75□□□□□ -0.37
GAPVD1-220ENST00000497580 BRINP2Q9C0B6 783 aa12.75□□□□□ -0.37
GAPVD1-220ENST00000497580 TRIM45Q9H8W5 580 aaPredicted RBP12.75□□□□□ -0.37
GAPVD1-220ENST00000497580 SLC6A13Q9NSD5 602 aa12.75□□□□□ -0.37
GAPVD1-220ENST00000497580 CFL2Q9Y281 166 aa12.75□□□□□ -0.37
GAPVD1-220ENST00000497580 ARL5AQ9Y689 179 aa12.75□□□□□ -0.37
GAPVD1-220ENST00000497580 ZBTB42B2RXF5 422 aa12.74□□□□□ -0.37
GAPVD1-220ENST00000497580 PDGFAP04085 211 aa12.74□□□□□ -0.37
GAPVD1-220ENST00000497580 TSPAN19P0C672 248 aa12.74□□□□□ -0.37
GAPVD1-220ENST00000497580 POU2F1P14859 743 aa12.74□□□□□ -0.37
GAPVD1-220ENST00000497580 CCT3P49368 545 aaKnown RBP12.74□□□□□ -0.37
GAPVD1-220ENST00000497580 TARDBPQ13148 414 aaKnown RBP eCLIP12.74□□□□□ -0.37
GAPVD1-220ENST00000497580 CAMK2GQ13555 558 aaPredicted RBP12.74□□□□□ -0.37
GAPVD1-220ENST00000497580 GALNT3Q14435 633 aa12.74□□□□□ -0.37
GAPVD1-220ENST00000497580 CYP27C1Q4G0S4 372 aa12.74□□□□□ -0.37
GAPVD1-220ENST00000497580 FBXO47Q5MNV8 452 aa12.74□□□□□ -0.37
GAPVD1-220ENST00000497580 NADSYN1Q6IA69 706 aa12.74□□□□□ -0.37
GAPVD1-220ENST00000497580 GALNT11Q8NCW6 608 aa12.74□□□□□ -0.37
GAPVD1-220ENST00000497580 CDC26Q8NHZ8 85 aa12.74□□□□□ -0.37
GAPVD1-220ENST00000497580 ASPNQ9BXN1 380 aa12.74□□□□□ -0.37
GAPVD1-220ENST00000497580 REEP1Q9H902 201 aa12.74□□□□□ -0.37
GAPVD1-220ENST00000497580 CCDC59Q9P031 241 aaKnown RBP12.74□□□□□ -0.37
GAPVD1-220ENST00000497580 TRMT6Q9UJA5 497 aaKnown RBP12.74□□□□□ -0.37
GAPVD1-220ENST00000497580 SCN4AP35499 1836 aa12.74□□□□□ -0.37
GAPVD1-220ENST00000497580 LY75O60449 1722 aa12.74□□□□□ -0.37
GAPVD1-220ENST00000497580 PDPK1O15530 556 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms