RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 COPG2Q9UBF2 871 aa12.05□□□□□ -0.48
SNX17-208ENST00000493711 PTBP2Q9UKA9 531 aaKnown RBP12.05□□□□□ -0.48
SNX17-208ENST00000493711 EMCNQ9ULC0 261 aa12.05□□□□□ -0.48
SNX17-208ENST00000493711 RNF215Q9Y6U7 377 aa12.05□□□□□ -0.48
SNX17-208ENST00000493711 CACNA1EQ15878 2313 aa12.04□□□□□ -0.48
SNX17-208ENST00000493711 UBXN8O00124 270 aa12.04□□□□□ -0.48
SNX17-208ENST00000493711 TNFSF14O43557 240 aa12.04□□□□□ -0.48
SNX17-208ENST00000493711 DUX1O43812 170 aa12.04□□□□□ -0.48
SNX17-208ENST00000493711 STK16O75716 305 aa12.04□□□□□ -0.48
SNX17-208ENST00000493711 UBXN7O94888 489 aa12.04□□□□□ -0.48
SNX17-208ENST00000493711 CCNDBP1O95273 360 aa12.04□□□□□ -0.48
SNX17-208ENST00000493711 TOP3BO95985 862 aaKnown RBP12.04□□□□□ -0.48
SNX17-208ENST00000493711 MTHFD2P13995 350 aa12.04□□□□□ -0.48
SNX17-208ENST00000493711 CREB1P16220 341 aa12.04□□□□□ -0.48
SNX17-208ENST00000493711 AMD1P17707 334 aa12.04□□□□□ -0.48
SNX17-208ENST00000493711 NR1D1P20393 614 aa12.04□□□□□ -0.48
SNX17-208ENST00000493711 SDHBP21912 280 aa12.04□□□□□ -0.48
SNX17-208ENST00000493711 ACP1P24666 158 aa12.04□□□□□ -0.48
SNX17-208ENST00000493711 HPDP32754 393 aaPredicted RBP12.04□□□□□ -0.48
SNX17-208ENST00000493711 GMPRP36959 345 aa12.04□□□□□ -0.48
SNX17-208ENST00000493711 DNAJB13P59910 316 aa12.04□□□□□ -0.48
SNX17-208ENST00000493711 SQSTM1Q13501 440 aa12.04□□□□□ -0.48
SNX17-208ENST00000493711 SETDB1Q15047 1291 aa12.04□□□□□ -0.48
SNX17-208ENST00000493711 PFKFB4Q16877 469 aa12.04□□□□□ -0.48
SNX17-208ENST00000493711 CAPN13Q6MZZ7 669 aaPredicted RBP12.04□□□□□ -0.48
SNX17-208ENST00000493711 TRIM42Q8IWZ5 723 aa12.04□□□□□ -0.48
SNX17-208ENST00000493711 KLHDC8AQ8IYD2 350 aa12.04□□□□□ -0.48
SNX17-208ENST00000493711 CARFQ8N187 725 aa12.04□□□□□ -0.48
SNX17-208ENST00000493711 OR4E2Q8NGC2 313 aa12.04□□□□□ -0.48
SNX17-208ENST00000493711 OR56A3Q8NH54 315 aa12.04□□□□□ -0.48
SNX17-208ENST00000493711 DENND1AQ8TEH3 1009 aa12.04□□□□□ -0.48
SNX17-208ENST00000493711 ZNF480Q8WV37 535 aa12.04□□□□□ -0.48
SNX17-208ENST00000493711 EXT2Q93063 718 aa12.04□□□□□ -0.48
SNX17-208ENST00000493711 ZBTB9Q96C00 473 aa12.04□□□□□ -0.48
SNX17-208ENST00000493711 AHCYL2Q96HN2 611 aaKnown RBP12.04□□□□□ -0.48
SNX17-208ENST00000493711 MIPEPQ99797 713 aa12.04□□□□□ -0.48
SNX17-208ENST00000493711 HAUS8Q9BT25 410 aa12.04□□□□□ -0.48
SNX17-208ENST00000493711 CD244Q9BZW8 370 aa12.04□□□□□ -0.48
SNX17-208ENST00000493711 RAB33BQ9H082 229 aa12.04□□□□□ -0.48
SNX17-208ENST00000493711 CCDC177Q9NQR7 707 aaPredicted RBP12.04□□□□□ -0.48
SNX17-208ENST00000493711 DLL3Q9NYJ7 618 aa12.04□□□□□ -0.48
SNX17-208ENST00000493711 SLC17A7Q9P2U7 560 aa12.04□□□□□ -0.48
SNX17-208ENST00000493711 EPHA6Q9UF33 1036 aa12.04□□□□□ -0.48
SNX17-208ENST00000493711 ICKQ9UPZ9 632 aa12.04□□□□□ -0.48
SNX17-208ENST00000493711 STK38LQ9Y2H1 464 aa12.04□□□□□ -0.48
SNX17-208ENST00000493711 BPTFQ12830 3046 aa12.04□□□□□ -0.48
SNX17-208ENST00000493711 CEP192Q8TEP8 1941 aa12.03□□□□□ -0.48
SNX17-208ENST00000493711 GON4LQ3T8J9 2241 aa12.03□□□□□ -0.48
SNX17-208ENST00000493711 LY6G6EA0A0G2JKS1 128 aa12.03□□□□□ -0.48
SNX17-208ENST00000493711 PIPSLA2A3N6 862 aa12.03□□□□□ -0.48
SNX17-208ENST00000493711 CPED1A4D0V7 1026 aa12.03□□□□□ -0.48
SNX17-208ENST00000493711 OR6C74A6NCV1 312 aa12.03□□□□□ -0.48
SNX17-208ENST00000493711 NCF1BA6NI72 391 aaPredicted RBP12.03□□□□□ -0.48
SNX17-208ENST00000493711 A8MT66 165 aa12.03□□□□□ -0.48
SNX17-208ENST00000493711 NCF1CA8MVU1 366 aaPredicted RBP12.03□□□□□ -0.48
SNX17-208ENST00000493711 C2orf74A8MZ97 194 aa12.03□□□□□ -0.48
SNX17-208ENST00000493711 E7ENX8 843 aa12.03□□□□□ -0.48
SNX17-208ENST00000493711 G3V2L1 256 aa12.03□□□□□ -0.48
SNX17-208ENST00000493711 H3BQF6 201 aa12.03□□□□□ -0.48
SNX17-208ENST00000493711 SH3BP5O60239 455 aa12.03□□□□□ -0.48
SNX17-208ENST00000493711 DLX3O60479 287 aa12.03□□□□□ -0.48
SNX17-208ENST00000493711 TRIM13O60858 407 aa12.03□□□□□ -0.48
SNX17-208ENST00000493711 SNUPNO95149 360 aaKnown RBP12.03□□□□□ -0.48
SNX17-208ENST00000493711 PROS1P07225 676 aa12.03□□□□□ -0.48
SNX17-208ENST00000493711 SBK3P0C264 359 aa12.03□□□□□ -0.48
SNX17-208ENST00000493711 DHRS4L1P0CG22 281 aa12.03□□□□□ -0.48
SNX17-208ENST00000493711 NCF1P14598 390 aaPredicted RBP12.03□□□□□ -0.48
SNX17-208ENST00000493711 IMPDH1P20839 514 aa12.03□□□□□ -0.48
SNX17-208ENST00000493711 HRH2P25021 359 aa12.03□□□□□ -0.48
SNX17-208ENST00000493711 IMPA1P29218 277 aa12.03□□□□□ -0.48
SNX17-208ENST00000493711 OAS2P29728 719 aaKnown RBP12.03□□□□□ -0.48
SNX17-208ENST00000493711 SERPINB5P36952 375 aa12.03□□□□□ -0.48
SNX17-208ENST00000493711 ETV4P43268 484 aa12.03□□□□□ -0.48
SNX17-208ENST00000493711 HERVK_113P63132 956 aa12.03□□□□□ -0.48
SNX17-208ENST00000493711 ABATP80404 500 aa12.03□□□□□ -0.48
SNX17-208ENST00000493711 E2F1Q01094 437 aa12.03□□□□□ -0.48
SNX17-208ENST00000493711 TAP2Q03519 686 aa12.03□□□□□ -0.48
SNX17-208ENST00000493711 PCBP2Q15366 365 aaKnown RBP eCLIP12.03□□□□□ -0.48
SNX17-208ENST00000493711 CCSMST1Q4G0I0 132 aa12.03□□□□□ -0.48
SNX17-208ENST00000493711 LRRC70Q7Z2Q7 622 aa12.03□□□□□ -0.48
SNX17-208ENST00000493711 EFL1Q7Z2Z2 1120 aaKnown RBP12.03□□□□□ -0.48
SNX17-208ENST00000493711 PIP4P1Q86T03 277 aa12.03□□□□□ -0.48
SNX17-208ENST00000493711 PLXDC1Q8IUK5 500 aa12.03□□□□□ -0.48
SNX17-208ENST00000493711 PTGR2Q8N8N7 351 aaPredicted RBP12.03□□□□□ -0.48
SNX17-208ENST00000493711 ANKRD42Q8N9B4 389 aa12.03□□□□□ -0.48
SNX17-208ENST00000493711 BAHD1Q8TBE0 780 aaPredicted RBP12.03□□□□□ -0.48
SNX17-208ENST00000493711 RAB3IL1Q8TBN0 382 aa12.03□□□□□ -0.48
SNX17-208ENST00000493711 CCDC74AQ96AQ1 378 aa12.03□□□□□ -0.48
SNX17-208ENST00000493711 L3HYPDHQ96EM0 354 aa12.03□□□□□ -0.48
SNX17-208ENST00000493711 ZDHHC12Q96GR4 267 aa12.03□□□□□ -0.48
SNX17-208ENST00000493711 CD180Q99467 661 aa12.03□□□□□ -0.48
SNX17-208ENST00000493711 MENTQ9BUN1 341 aa12.03□□□□□ -0.48
SNX17-208ENST00000493711 SGPP1Q9BX95 441 aa12.03□□□□□ -0.48
SNX17-208ENST00000493711 C1QTNF3Q9BXJ4 246 aa12.03□□□□□ -0.48
SNX17-208ENST00000493711 ERVK-6Q9BXR3 956 aa12.03□□□□□ -0.48
SNX17-208ENST00000493711 RXFP3Q9NSD7 469 aa12.03□□□□□ -0.48
SNX17-208ENST00000493711 OXSMQ9NWU1 459 aa12.03□□□□□ -0.48
SNX17-208ENST00000493711 OPTCQ9UBM4 332 aa12.03□□□□□ -0.48
SNX17-208ENST00000493711 BTBD3Q9Y2F9 522 aa12.03□□□□□ -0.48
SNX17-208ENST00000493711 PCDHB11Q9Y5F2 797 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms