RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 GOLPH3Q9H4A6 298 aa4.11□□□□□ -1.75
BRCA1-220ENST00000492859 GSX1Q9H4S2 264 aaPredicted RBP4.11□□□□□ -1.75
BRCA1-220ENST00000492859 NOL11Q9H8H0 719 aaKnown RBP4.11□□□□□ -1.75
BRCA1-220ENST00000492859 BCO1Q9HAY6 547 aa4.11□□□□□ -1.75
BRCA1-220ENST00000492859 GLOD4Q9HC38 313 aa4.11□□□□□ -1.75
BRCA1-220ENST00000492859 GP6Q9HCN6 339 aa4.11□□□□□ -1.75
BRCA1-220ENST00000492859 ASCL3Q9NQ33 180 aa4.11□□□□□ -1.75
BRCA1-220ENST00000492859 PPANQ9NQ55 473 aaKnown RBP4.11□□□□□ -1.75
BRCA1-220ENST00000492859 GPR27Q9NS67 375 aa4.11□□□□□ -1.75
BRCA1-220ENST00000492859 SAMSN1Q9NSI8 373 aaKnown RBP4.11□□□□□ -1.75
BRCA1-220ENST00000492859 CATSPERZQ9NTU4 200 aa4.11□□□□□ -1.75
BRCA1-220ENST00000492859 MED17Q9NVC6 651 aa4.11□□□□□ -1.75
BRCA1-220ENST00000492859 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.11□□□□□ -1.75
BRCA1-220ENST00000492859 BEX4Q9NWD9 120 aaPredicted RBP4.11□□□□□ -1.75
BRCA1-220ENST00000492859 CACNA2D2Q9NY47 1150 aa4.11□□□□□ -1.75
BRCA1-220ENST00000492859 ERAP1Q9NZ08 941 aa4.11□□□□□ -1.75
BRCA1-220ENST00000492859 MTCH1Q9NZJ7 389 aa4.11□□□□□ -1.75
BRCA1-220ENST00000492859 TXNDC16Q9P2K2 825 aa4.11□□□□□ -1.75
BRCA1-220ENST00000492859 CTNNAL1Q9UBT7 734 aa4.11□□□□□ -1.75
BRCA1-220ENST00000492859 DIMT1Q9UNQ2 313 aaKnown RBP4.11□□□□□ -1.75
BRCA1-220ENST00000492859 STARD10Q9Y365 291 aa4.11□□□□□ -1.75
BRCA1-220ENST00000492859 TNFRSF18Q9Y5U5 241 aa4.11□□□□□ -1.75
BRCA1-220ENST00000492859 TAF1LQ8IZX4 1826 aa4.11□□□□□ -1.75
BRCA1-220ENST00000492859 KIF24Q5T7B8 1368 aa4.11□□□□□ -1.75
BRCA1-220ENST00000492859 MAST3O60307 1309 aa4.11□□□□□ -1.75
BRCA1-220ENST00000492859 STK36Q9NRP7 1315 aa4.11□□□□□ -1.75
BRCA1-220ENST00000492859 A0A0G2JLW4 131 aa4.1□□□□□ -1.75
BRCA1-220ENST00000492859 GNG14A0A1W2PPG7 69 aa4.1□□□□□ -1.75
BRCA1-220ENST00000492859 WIPF3A6NGB9 483 aa4.1□□□□□ -1.75
BRCA1-220ENST00000492859 A6NL46 340 aa4.1□□□□□ -1.75
BRCA1-220ENST00000492859 DRGXA6NNA5 263 aa4.1□□□□□ -1.75
BRCA1-220ENST00000492859 SPATA31C2B4DYI2 1134 aa4.1□□□□□ -1.75
BRCA1-220ENST00000492859 FOXE1O00358 373 aaPredicted RBP4.1□□□□□ -1.75
BRCA1-220ENST00000492859 RGS13O14921 159 aa4.1□□□□□ -1.75
BRCA1-220ENST00000492859 PJA2O43164 708 aa4.1□□□□□ -1.75
BRCA1-220ENST00000492859 GLRA3O75311 464 aa4.1□□□□□ -1.75
BRCA1-220ENST00000492859 DFFBO76075 338 aa4.1□□□□□ -1.75
BRCA1-220ENST00000492859 PLEKHA8P1O95397 391 aa4.1□□□□□ -1.75
BRCA1-220ENST00000492859 SNAP29O95721 258 aa4.1□□□□□ -1.75
BRCA1-220ENST00000492859 CXCL10P02778 98 aa4.1□□□□□ -1.75
BRCA1-220ENST00000492859 FCER2P06734 321 aa4.1□□□□□ -1.75
BRCA1-220ENST00000492859 PGK2P07205 417 aa4.1□□□□□ -1.75
BRCA1-220ENST00000492859 RNF224P0DH78 156 aa4.1□□□□□ -1.75
BRCA1-220ENST00000492859 SLURP2P0DP57 97 aa4.1□□□□□ -1.75
BRCA1-220ENST00000492859 RARAP10276 462 aa4.1□□□□□ -1.75
BRCA1-220ENST00000492859 DRD2P14416 443 aa4.1□□□□□ -1.75
BRCA1-220ENST00000492859 CD19P15391 556 aa4.1□□□□□ -1.75
BRCA1-220ENST00000492859 ELNP15502 786 aa4.1□□□□□ -1.75
BRCA1-220ENST00000492859 TNNI1P19237 187 aa4.1□□□□□ -1.75
BRCA1-220ENST00000492859 ACHEP22303 614 aa4.1□□□□□ -1.75
BRCA1-220ENST00000492859 HSD11B1P28845 292 aa4.1□□□□□ -1.75
BRCA1-220ENST00000492859 IL12BP29460 328 aa4.1□□□□□ -1.75
BRCA1-220ENST00000492859 EIF2S3P41091 472 aaKnown RBP4.1□□□□□ -1.75
BRCA1-220ENST00000492859 CAPZBP47756 277 aa4.1□□□□□ -1.75
BRCA1-220ENST00000492859 SLC6A11P48066 632 aa4.1□□□□□ -1.75
BRCA1-220ENST00000492859 PPP3CCP48454 512 aa4.1□□□□□ -1.75
BRCA1-220ENST00000492859 NPY2RP49146 381 aa4.1□□□□□ -1.75
BRCA1-220ENST00000492859 ARRB1P49407 418 aaPredicted RBP4.1□□□□□ -1.75
BRCA1-220ENST00000492859 TMED10P49755 219 aaKnown RBP4.1□□□□□ -1.75
BRCA1-220ENST00000492859 CCNG1P51959 295 aa4.1□□□□□ -1.75
BRCA1-220ENST00000492859 JAK3P52333 1124 aa4.1□□□□□ -1.75
BRCA1-220ENST00000492859 PSMD4P55036 377 aaKnown RBP4.1□□□□□ -1.75
BRCA1-220ENST00000492859 NCKAP1LP55160 1127 aa4.1□□□□□ -1.75
BRCA1-220ENST00000492859 AP3S2P59780 193 aa4.1□□□□□ -1.75
BRCA1-220ENST00000492859 YWHAGP61981 247 aaKnown RBP eCLIP4.1□□□□□ -1.75
BRCA1-220ENST00000492859 RAB11AP62491 216 aa4.1□□□□□ -1.75
BRCA1-220ENST00000492859 RPL10AP62906 217 aaKnown RBP4.1□□□□□ -1.75
BRCA1-220ENST00000492859 SIM1P81133 766 aaPredicted RBP4.1□□□□□ -1.75
BRCA1-220ENST00000492859 CHRNEQ04844 493 aa4.1□□□□□ -1.75
BRCA1-220ENST00000492859 MZT1Q08AG7 82 aa4.1□□□□□ -1.75
BRCA1-220ENST00000492859 SLC13A2Q13183 592 aa4.1□□□□□ -1.75
BRCA1-220ENST00000492859 PDE7AQ13946 482 aa4.1□□□□□ -1.75
BRCA1-220ENST00000492859 HLXQ14774 488 aaPredicted RBP4.1□□□□□ -1.75
BRCA1-220ENST00000492859 DRAP1Q14919 205 aaPredicted RBP4.1□□□□□ -1.75
BRCA1-220ENST00000492859 RAB11BQ15907 218 aa4.1□□□□□ -1.75
BRCA1-220ENST00000492859 ME3Q16798 604 aa4.1□□□□□ -1.75
BRCA1-220ENST00000492859 PPP1R3AQ16821 1122 aa4.1□□□□□ -1.75
BRCA1-220ENST00000492859 GOLGA7BQ2TAP0 167 aa4.1□□□□□ -1.75
BRCA1-220ENST00000492859 ASTE1Q2TB18 679 aaPredicted RBP4.1□□□□□ -1.75
BRCA1-220ENST00000492859 KHDC1Q4VXA5 237 aaKnown RBP4.1□□□□□ -1.75
BRCA1-220ENST00000492859 LRRC24Q50LG9 513 aa4.1□□□□□ -1.75
BRCA1-220ENST00000492859 FBLN7Q53RD9 439 aa4.1□□□□□ -1.75
BRCA1-220ENST00000492859 PCID2Q5JVF3 399 aa4.1□□□□□ -1.75
BRCA1-220ENST00000492859 C6orf136Q5SQH8 315 aa4.1□□□□□ -1.75
BRCA1-220ENST00000492859 CCNJQ5T5M9 372 aa4.1□□□□□ -1.75
BRCA1-220ENST00000492859 SEL1L2Q5TEA6 688 aa4.1□□□□□ -1.75
BRCA1-220ENST00000492859 ARHGAP40Q5TG30 622 aa4.1□□□□□ -1.75
BRCA1-220ENST00000492859 PRAMEF5Q5TYX0 476 aa4.1□□□□□ -1.75
BRCA1-220ENST00000492859 PRAMEF9Q5VWM5 478 aa4.1□□□□□ -1.75
BRCA1-220ENST00000492859 PRAMEF6Q5VXH4 476 aa4.1□□□□□ -1.75
BRCA1-220ENST00000492859 KRT79Q5XKE5 535 aa4.1□□□□□ -1.75
BRCA1-220ENST00000492859 PYHIN1Q6K0P9 492 aa4.1□□□□□ -1.75
BRCA1-220ENST00000492859 ZNF530Q6P9A1 599 aaPredicted RBP4.1□□□□□ -1.75
BRCA1-220ENST00000492859 METTL7BQ6UX53 244 aa4.1□□□□□ -1.75
BRCA1-220ENST00000492859 LRRC74BQ6ZQY2 392 aa4.1□□□□□ -1.75
BRCA1-220ENST00000492859 PLEKHG7Q6ZR37 379 aa4.1□□□□□ -1.75
BRCA1-220ENST00000492859 EIF3MQ7L2H7 374 aaKnown RBP4.1□□□□□ -1.75
BRCA1-220ENST00000492859 CXXC5Q7LFL8 322 aaKnown RBP4.1□□□□□ -1.75
BRCA1-220ENST00000492859 RD3Q7Z3Z2 195 aa4.1□□□□□ -1.75
BRCA1-220ENST00000492859 PRSS42Q7Z5A4 293 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms