RNA–Protein interactions for RNA: ENST00000492793.1

CLK1-213, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 596 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-213ENST00000492793 LRP12Q9Y561 859 aa3.64□□□□□ -1.83
CLK1-213ENST00000492793 A0A1W2PN81 502 aa3.63□□□□□ -1.83
CLK1-213ENST00000492793 ENO4A6NNW6 628 aa3.63□□□□□ -1.83
CLK1-213ENST00000492793 LUC7L3O95232 432 aaKnown RBP3.63□□□□□ -1.83
CLK1-213ENST00000492793 SLU7O95391 586 aaKnown RBP3.63□□□□□ -1.83
CLK1-213ENST00000492793 GSRP00390 522 aa3.63□□□□□ -1.83
CLK1-213ENST00000492793 GBAP04062 536 aa3.63□□□□□ -1.83
CLK1-213ENST00000492793 RPN1P04843 607 aaKnown RBP3.63□□□□□ -1.83
CLK1-213ENST00000492793 GLULP15104 373 aa3.63□□□□□ -1.83
CLK1-213ENST00000492793 PAX1P15863 534 aa3.63□□□□□ -1.83
CLK1-213ENST00000492793 EFNA1P20827 205 aaPredicted RBP3.63□□□□□ -1.83
CLK1-213ENST00000492793 CA4P22748 312 aa3.63□□□□□ -1.83
CLK1-213ENST00000492793 CSTF2P33240 577 aaKnown RBP eCLIP3.63□□□□□ -1.83
CLK1-213ENST00000492793 PTGER4P35408 488 aa3.63□□□□□ -1.83
CLK1-213ENST00000492793 CHRNA7P36544 502 aa3.63□□□□□ -1.83
CLK1-213ENST00000492793 HSD17B3P37058 310 aa3.63□□□□□ -1.83
CLK1-213ENST00000492793 RBP5P82980 135 aa3.63□□□□□ -1.83
CLK1-213ENST00000492793 CDR2Q01850 454 aa3.63□□□□□ -1.83
CLK1-213ENST00000492793 POU5F1Q01860 360 aaKnown RBP3.63□□□□□ -1.83
CLK1-213ENST00000492793 SCN1BQ07699 218 aa3.63□□□□□ -1.83
CLK1-213ENST00000492793 SQLEQ14534 574 aa3.63□□□□□ -1.83
CLK1-213ENST00000492793 NONOQ15233 471 aaKnown RBP eCLIP3.63□□□□□ -1.83
CLK1-213ENST00000492793 UGT3A2Q3SY77 523 aa3.63□□□□□ -1.83
CLK1-213ENST00000492793 GTDC1Q4AE62 458 aa3.63□□□□□ -1.83
CLK1-213ENST00000492793 CYP4A22Q5TCH4 519 aa3.63□□□□□ -1.83
CLK1-213ENST00000492793 DCLRE1AQ6PJP8 1040 aa3.63□□□□□ -1.83
CLK1-213ENST00000492793 MFSD6Q6ZSS7 791 aa3.63□□□□□ -1.83
CLK1-213ENST00000492793 KLHL7Q8IXQ5 586 aa3.63□□□□□ -1.83
CLK1-213ENST00000492793 ZNF843Q8N446 348 aa3.63□□□□□ -1.83
CLK1-213ENST00000492793 KLHDC9Q8NEP7 349 aa3.63□□□□□ -1.83
CLK1-213ENST00000492793 GOT1L1Q8NHS2 421 aaPredicted RBP3.63□□□□□ -1.83
CLK1-213ENST00000492793 GRAPLQ8TC17 118 aaPredicted RBP3.63□□□□□ -1.83
CLK1-213ENST00000492793 PIGBQ92521 554 aa3.63□□□□□ -1.83
CLK1-213ENST00000492793 CCDC114Q96M63 670 aa3.63□□□□□ -1.83
CLK1-213ENST00000492793 FAM20AQ96MK3 541 aa3.63□□□□□ -1.83
CLK1-213ENST00000492793 SDF2L1Q9HCN8 221 aa3.63□□□□□ -1.83
CLK1-213ENST00000492793 SDR39U1Q9NRG7 319 aaPredicted RBP3.63□□□□□ -1.83
CLK1-213ENST00000492793 FGF21Q9NSA1 209 aa3.63□□□□□ -1.83
CLK1-213ENST00000492793 GTF3C4Q9UKN8 822 aa3.63□□□□□ -1.83
CLK1-213ENST00000492793 STUB1Q9UNE7 303 aa3.63□□□□□ -1.83
CLK1-213ENST00000492793 KCNJ14Q9UNX9 436 aa3.63□□□□□ -1.83
CLK1-213ENST00000492793 C2CD2Q9Y426 696 aa3.63□□□□□ -1.83
CLK1-213ENST00000492793 NOTCH4Q99466 2003 aa3.63□□□□□ -1.83
CLK1-213ENST00000492793 PMS2P5A8MQ11 134 aa3.62□□□□□ -1.83
CLK1-213ENST00000492793 FAM72CH0Y354 149 aa3.62□□□□□ -1.83
CLK1-213ENST00000492793 PSMA7O14818 248 aa3.62□□□□□ -1.83
CLK1-213ENST00000492793 ARPC2O15144 300 aa3.62□□□□□ -1.83
CLK1-213ENST00000492793 ATP6V0E1O15342 81 aa3.62□□□□□ -1.83
CLK1-213ENST00000492793 SNX3O60493 162 aa3.62□□□□□ -1.83
CLK1-213ENST00000492793 NGFP01138 241 aa3.62□□□□□ -1.83
CLK1-213ENST00000492793 CSN3P07498 182 aa3.62□□□□□ -1.83
CLK1-213ENST00000492793 VIMP08670 466 aaKnown RBP3.62□□□□□ -1.83
CLK1-213ENST00000492793 PLA2G4BP0C869 781 aa3.62□□□□□ -1.83
CLK1-213ENST00000492793 STAG3L1P0CL83 205 aa3.62□□□□□ -1.83
CLK1-213ENST00000492793 DARSP14868 501 aaKnown RBP3.62□□□□□ -1.83
CLK1-213ENST00000492793 PSMA3P25788 255 aa3.62□□□□□ -1.83
CLK1-213ENST00000492793 TLX1P31314 330 aaPredicted RBP3.62□□□□□ -1.83
CLK1-213ENST00000492793 MAP2K2P36507 400 aa3.62□□□□□ -1.83
CLK1-213ENST00000492793 LBX1P52954 281 aa3.62□□□□□ -1.83
CLK1-213ENST00000492793 ROR1Q01973 937 aa3.62□□□□□ -1.83
CLK1-213ENST00000492793 KLC1Q07866 573 aa3.62□□□□□ -1.83
CLK1-213ENST00000492793 TAF10Q12962 218 aa3.62□□□□□ -1.83
CLK1-213ENST00000492793 HNRNPA0Q13151 305 aaKnown RBP3.62□□□□□ -1.83
CLK1-213ENST00000492793 GPR17Q13304 367 aa3.62□□□□□ -1.83
CLK1-213ENST00000492793 PTK6Q13882 451 aa3.62□□□□□ -1.83
CLK1-213ENST00000492793 SPDYCQ5MJ68 293 aa3.62□□□□□ -1.83
CLK1-213ENST00000492793 C6orf136Q5SQH8 315 aa3.62□□□□□ -1.83
CLK1-213ENST00000492793 HECTD3Q5T447 861 aa3.62□□□□□ -1.83
CLK1-213ENST00000492793 FAM72AQ5TYM5 149 aa3.62□□□□□ -1.83
CLK1-213ENST00000492793 FAM72DQ6L9T8 149 aa3.62□□□□□ -1.83
CLK1-213ENST00000492793 FAM72BQ86X60 149 aa3.62□□□□□ -1.83
CLK1-213ENST00000492793 NDUFAF2Q8N183 169 aa3.62□□□□□ -1.83
CLK1-213ENST00000492793 SIX6OS1Q8N1H7 587 aa3.62□□□□□ -1.83
CLK1-213ENST00000492793 MAPKAPK5-AS1Q8N8E1 139 aa3.62□□□□□ -1.83
CLK1-213ENST00000492793 NOA1Q8NC60 698 aaKnown RBP3.62□□□□□ -1.83
CLK1-213ENST00000492793 OR13C3Q8NGS6 347 aa3.62□□□□□ -1.83
CLK1-213ENST00000492793 OLIG1Q8TAK6 271 aa3.62□□□□□ -1.83
CLK1-213ENST00000492793 INTS14Q96SY0 518 aa3.62□□□□□ -1.83
CLK1-213ENST00000492793 ZMYND12Q9H0C1 365 aa3.62□□□□□ -1.83
CLK1-213ENST00000492793 DNAJC4Q9NNZ3 241 aa3.62□□□□□ -1.83
CLK1-213ENST00000492793 SLC52A3Q9NQ40 469 aa3.62□□□□□ -1.83
CLK1-213ENST00000492793 PPANQ9NQ55 473 aaKnown RBP3.62□□□□□ -1.83
CLK1-213ENST00000492793 P4HTMQ9NXG6 502 aa3.62□□□□□ -1.83
CLK1-213ENST00000492793 RASAL2Q9UJF2 1139 aa3.62□□□□□ -1.83
CLK1-213ENST00000492793 STK36Q9NRP7 1315 aa3.62□□□□□ -1.83
CLK1-213ENST00000492793 HTR3EA5X5Y0 456 aa3.61□□□□□ -1.83
CLK1-213ENST00000492793 C2orf81A6NN90 581 aa3.61□□□□□ -1.83
CLK1-213ENST00000492793 KRTAP29-1A8MX34 341 aaPredicted RBP3.61□□□□□ -1.83
CLK1-213ENST00000492793 FAM86B1E9PN63 330 aa3.61□□□□□ -1.83
CLK1-213ENST00000492793 TRMUO75648 421 aaKnown RBP3.61□□□□□ -1.83
CLK1-213ENST00000492793 PGLSO95336 258 aa3.61□□□□□ -1.83
CLK1-213ENST00000492793 EDN1P05305 212 aa3.61□□□□□ -1.83
CLK1-213ENST00000492793 UMODP07911 640 aa3.61□□□□□ -1.83
CLK1-213ENST00000492793 FAM86B2P0C5J1 330 aa3.61□□□□□ -1.83
CLK1-213ENST00000492793 EPCAMP16422 314 aa3.61□□□□□ -1.83
CLK1-213ENST00000492793 LHCGRP22888 699 aa3.61□□□□□ -1.83
CLK1-213ENST00000492793 CA6P23280 308 aa3.61□□□□□ -1.83
CLK1-213ENST00000492793 CHRNB4P30926 498 aa3.61□□□□□ -1.83
CLK1-213ENST00000492793 HOXC13P31276 330 aa3.61□□□□□ -1.83
CLK1-213ENST00000492793 TNNT3P45378 269 aaPredicted RBP3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms