RNA–Protein interactions for RNA: ENST00000488463.5

COL9A2-208, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 1,005 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-208ENST00000488463 FCRL6Q6DN72 434 aa13.68□□□□□ -0.22
COL9A2-208ENST00000488463 LCN10Q6JVE6 187 aa13.68□□□□□ -0.22
COL9A2-208ENST00000488463 FAM199XQ6PEV8 388 aaPredicted RBP13.68□□□□□ -0.22
COL9A2-208ENST00000488463 MAATS1Q7Z4T9 603 aa13.68□□□□□ -0.22
COL9A2-208ENST00000488463 TAX1BP1Q86VP1 789 aa13.68□□□□□ -0.22
COL9A2-208ENST00000488463 ANKMY2Q8IV38 441 aa13.68□□□□□ -0.22
COL9A2-208ENST00000488463 EXD3Q8N9H8 876 aa13.68□□□□□ -0.22
COL9A2-208ENST00000488463 FBXO36Q8NEA4 188 aa13.68□□□□□ -0.22
COL9A2-208ENST00000488463 OR2A1Q8NGT9 310 aa13.68□□□□□ -0.22
COL9A2-208ENST00000488463 GSDMBQ8TAX9 411 aa13.68□□□□□ -0.22
COL9A2-208ENST00000488463 CT55Q8WUE5 264 aa13.68□□□□□ -0.22
COL9A2-208ENST00000488463 SLC39A7Q92504 469 aa13.68□□□□□ -0.22
COL9A2-208ENST00000488463 DLG3Q92796 817 aa13.68□□□□□ -0.22
COL9A2-208ENST00000488463 EXTL1Q92935 676 aa13.68□□□□□ -0.22
COL9A2-208ENST00000488463 CFAP36Q96G28 342 aa13.68□□□□□ -0.22
COL9A2-208ENST00000488463 LRFN5Q96NI6 719 aa13.68□□□□□ -0.22
COL9A2-208ENST00000488463 NDNQ99608 321 aa13.68□□□□□ -0.22
COL9A2-208ENST00000488463 MCMBPQ9BTE3 642 aa13.68□□□□□ -0.22
COL9A2-208ENST00000488463 SEMA4CQ9C0C4 833 aa13.68□□□□□ -0.22
COL9A2-208ENST00000488463 ENAMQ9NRM1 1142 aa13.68□□□□□ -0.22
COL9A2-208ENST00000488463 PCMTD2Q9NV79 361 aa13.68□□□□□ -0.22
COL9A2-208ENST00000488463 SPATA7Q9P0W8 599 aa13.68□□□□□ -0.22
COL9A2-208ENST00000488463 PADI1Q9ULC6 663 aa13.68□□□□□ -0.22
COL9A2-208ENST00000488463 KLHL20Q9Y2M5 609 aa13.68□□□□□ -0.22
COL9A2-208ENST00000488463 MRFAP1Q9Y605 127 aa13.68□□□□□ -0.22
COL9A2-208ENST00000488463 PSAT1Q9Y617 370 aa13.68□□□□□ -0.22
COL9A2-208ENST00000488463 MED13Q9UHV7 2174 aa13.68□□□□□ -0.22
COL9A2-208ENST00000488463 CCDC88CQ9P219 2028 aa13.68□□□□□ -0.22
COL9A2-208ENST00000488463 MDC1Q14676 2089 aaKnown RBP13.67□□□□□ -0.22
COL9A2-208ENST00000488463 ZNF891A8MT65 544 aaPredicted RBP13.67□□□□□ -0.22
COL9A2-208ENST00000488463 KIF2AO00139 706 aaPredicted RBP13.67□□□□□ -0.22
COL9A2-208ENST00000488463 EIF3FO00303 357 aaPredicted RBP13.67□□□□□ -0.22
COL9A2-208ENST00000488463 CPNE3O75131 537 aaKnown RBP13.67□□□□□ -0.22
COL9A2-208ENST00000488463 TSPAN12O95859 305 aa13.67□□□□□ -0.22
COL9A2-208ENST00000488463 C1QAP02745 245 aa13.67□□□□□ -0.22
COL9A2-208ENST00000488463 PRB1P04280 392 aa13.67□□□□□ -0.22
COL9A2-208ENST00000488463 FURINP09958 794 aa13.67□□□□□ -0.22
COL9A2-208ENST00000488463 ENO3P13929 434 aaPredicted RBP13.67□□□□□ -0.22
COL9A2-208ENST00000488463 PSMB5P28074 263 aa13.67□□□□□ -0.22
COL9A2-208ENST00000488463 OAS2P29728 719 aaKnown RBP13.67□□□□□ -0.22
COL9A2-208ENST00000488463 DLSTP36957 453 aa13.67□□□□□ -0.22
COL9A2-208ENST00000488463 PGGT1BP53609 377 aa13.67□□□□□ -0.22
COL9A2-208ENST00000488463 ITGA1P56199 1179 aa13.67□□□□□ -0.22
COL9A2-208ENST00000488463 PDIA2Q13087 525 aaKnown RBP13.67□□□□□ -0.22
COL9A2-208ENST00000488463 DEFB110Q30KQ9 67 aa13.67□□□□□ -0.22
COL9A2-208ENST00000488463 TTLL9Q3SXZ7 439 aa13.67□□□□□ -0.22
COL9A2-208ENST00000488463 PIWIL4Q7Z3Z4 852 aaKnown RBP13.67□□□□□ -0.22
COL9A2-208ENST00000488463 TMEM126BQ8IUX1 230 aa13.67□□□□□ -0.22
COL9A2-208ENST00000488463 LRRC56Q8IYG6 542 aaPredicted RBP13.67□□□□□ -0.22
COL9A2-208ENST00000488463 CPNE9Q8IYJ1 553 aa13.67□□□□□ -0.22
COL9A2-208ENST00000488463 DSELQ8IZU8 1212 aa13.67□□□□□ -0.22
COL9A2-208ENST00000488463 ZSCAN1Q8NBB4 408 aa13.67□□□□□ -0.22
COL9A2-208ENST00000488463 OR9A1PQ8NGU1 263 aa13.67□□□□□ -0.22
COL9A2-208ENST00000488463 SKA2Q8WVK7 121 aaPredicted RBP13.67□□□□□ -0.22
COL9A2-208ENST00000488463 STARD8Q92502 1023 aa13.67□□□□□ -0.22
COL9A2-208ENST00000488463 KIAA1143Q96AT1 154 aaPredicted RBP13.67□□□□□ -0.22
COL9A2-208ENST00000488463 SLC22A18Q96BI1 424 aa13.67□□□□□ -0.22
COL9A2-208ENST00000488463 C16orf45Q96MC5 204 aaPredicted RBP13.67□□□□□ -0.22
COL9A2-208ENST00000488463 FOPNLQ96NB1 174 aa13.67□□□□□ -0.22
COL9A2-208ENST00000488463 ZNF285Q96NJ3 590 aa13.67□□□□□ -0.22
COL9A2-208ENST00000488463 PKP4Q99569 1192 aa13.67□□□□□ -0.22
COL9A2-208ENST00000488463 EFHD1Q9BUP0 239 aa13.67□□□□□ -0.22
COL9A2-208ENST00000488463 RAB11FIP5Q9BXF6 653 aa13.67□□□□□ -0.22
COL9A2-208ENST00000488463 SPRTNQ9H040 489 aaPredicted RBP13.67□□□□□ -0.22
COL9A2-208ENST00000488463 CCDC68Q9H2F9 335 aa13.67□□□□□ -0.22
COL9A2-208ENST00000488463 DPH5Q9H2P9 285 aa13.67□□□□□ -0.22
COL9A2-208ENST00000488463 CDC23Q9UJX2 597 aa13.67□□□□□ -0.22
COL9A2-208ENST00000488463 SLC39A10Q9ULF5 831 aa13.67□□□□□ -0.22
COL9A2-208ENST00000488463 SETXQ7Z333 2677 aaKnown RBP13.67□□□□□ -0.22
COL9A2-208ENST00000488463 C21orf140B9A014 251 aa13.66□□□□□ -0.22
COL9A2-208ENST00000488463 MEN1O00255 615 aa13.66□□□□□ -0.22
COL9A2-208ENST00000488463 NRP2O60462 931 aa13.66□□□□□ -0.22
COL9A2-208ENST00000488463 FKBP9O95302 570 aa13.66□□□□□ -0.22
COL9A2-208ENST00000488463 CBSLP0DN79 551 aa13.66□□□□□ -0.22
COL9A2-208ENST00000488463 CBSP35520 551 aa13.66□□□□□ -0.22
COL9A2-208ENST00000488463 GRIA3P42263 894 aa13.66□□□□□ -0.22
COL9A2-208ENST00000488463 SKIV2L2P42285 1042 aaKnown RBP13.66□□□□□ -0.22
COL9A2-208ENST00000488463 DNASE1L3Q13609 305 aa13.66□□□□□ -0.22
COL9A2-208ENST00000488463 LY6DQ14210 128 aa13.66□□□□□ -0.22
COL9A2-208ENST00000488463 ATP1A1-AS1Q5TC04 95 aa13.66□□□□□ -0.22
COL9A2-208ENST00000488463 TTC23LQ6PF05 361 aa13.66□□□□□ -0.22
COL9A2-208ENST00000488463 ZDHHC24Q6UX98 284 aa13.66□□□□□ -0.22
COL9A2-208ENST00000488463 BBOF1Q8ND07 529 aa13.66□□□□□ -0.22
COL9A2-208ENST00000488463 OR2L3Q8NG85 312 aa13.66□□□□□ -0.22
COL9A2-208ENST00000488463 EEF1AKMT1Q8WVE0 214 aa13.66□□□□□ -0.22
COL9A2-208ENST00000488463 FANCEQ9HB96 536 aa13.66□□□□□ -0.22
COL9A2-208ENST00000488463 SMYD2Q9NRG4 433 aa13.66□□□□□ -0.22
COL9A2-208ENST00000488463 UBR5O95071 2799 aaPredicted RBP13.66□□□□□ -0.22
COL9A2-208ENST00000488463 IGKV1-8A0A0C4DH67 115 aa13.65□□□□□ -0.22
COL9A2-208ENST00000488463 E7ENX8 843 aa13.65□□□□□ -0.22
COL9A2-208ENST00000488463 ZNF749O43361 778 aa13.65□□□□□ -0.22
COL9A2-208ENST00000488463 CTSVO60911 334 aa13.65□□□□□ -0.22
COL9A2-208ENST00000488463 VPS26AO75436 327 aa13.65□□□□□ -0.22
COL9A2-208ENST00000488463 SLC16A8O95907 504 aa13.65□□□□□ -0.22
COL9A2-208ENST00000488463 RECKO95980 971 aa13.65□□□□□ -0.22
COL9A2-208ENST00000488463 CATP04040 527 aaKnown RBP13.65□□□□□ -0.22
COL9A2-208ENST00000488463 CCNYL3P0C7X3 344 aa13.65□□□□□ -0.22
COL9A2-208ENST00000488463 TCN2P20062 427 aa13.65□□□□□ -0.22
COL9A2-208ENST00000488463 FDXRP22570 491 aa13.65□□□□□ -0.22
COL9A2-208ENST00000488463 MCM3P25205 808 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms