RNA–Protein interactions for RNA: ENST00000488106.1

RHBDD3-205, Transcript of rhomboid domain containing 3, humanhuman

TSL 5

Gene RHBDD3, Length 640 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-205ENST00000488106 MYO1CO00159 1063 aa22.81■■□□□ 1.24
RHBDD3-205ENST00000488106 HCRTR1O43613 425 aa22.81■■□□□ 1.24
RHBDD3-205ENST00000488106 CBSLP0DN79 551 aa22.81■■□□□ 1.24
RHBDD3-205ENST00000488106 CBSP35520 551 aa22.81■■□□□ 1.24
RHBDD3-205ENST00000488106 ITGA1P56199 1179 aa22.81■■□□□ 1.24
RHBDD3-205ENST00000488106 RHDQ02161 417 aa22.81■■□□□ 1.24
RHBDD3-205ENST00000488106 TSTA3Q13630 321 aaPredicted RBP22.81■■□□□ 1.24
RHBDD3-205ENST00000488106 FASTKQ14296 549 aaKnown RBP22.81■■□□□ 1.24
RHBDD3-205ENST00000488106 FRG1Q14331 258 aaKnown RBP22.81■■□□□ 1.24
RHBDD3-205ENST00000488106 SF1Q15637 639 aaKnown RBP22.81■■□□□ 1.24
RHBDD3-205ENST00000488106 CCDC25Q86WR0 208 aa22.81■■□□□ 1.24
RHBDD3-205ENST00000488106 PKP4Q99569 1192 aa22.81■■□□□ 1.24
RHBDD3-205ENST00000488106 MRPS18BQ9Y676 258 aaKnown RBP22.81■■□□□ 1.24
RHBDD3-205ENST00000488106 MSL3P1P0C860 447 aa22.8■■□□□ 1.24
RHBDD3-205ENST00000488106 OAS2P29728 719 aaKnown RBP22.8■■□□□ 1.24
RHBDD3-205ENST00000488106 PGGT1BP53609 377 aa22.8■■□□□ 1.24
RHBDD3-205ENST00000488106 PDAP1Q13442 181 aaKnown RBP22.8■■□□□ 1.24
RHBDD3-205ENST00000488106 PAQR3Q6TCH7 311 aa22.8■■□□□ 1.24
RHBDD3-205ENST00000488106 PALM2Q8IXS6 379 aa22.8■■□□□ 1.24
RHBDD3-205ENST00000488106 FBXO25Q8TCJ0 367 aa22.8■■□□□ 1.24
RHBDD3-205ENST00000488106 CT55Q8WUE5 264 aa22.8■■□□□ 1.24
RHBDD3-205ENST00000488106 EEF1AKMT1Q8WVE0 214 aa22.8■■□□□ 1.24
RHBDD3-205ENST00000488106 ASB11Q8WXH4 323 aa22.8■■□□□ 1.24
RHBDD3-205ENST00000488106 CLIP3Q96DZ5 547 aa22.8■■□□□ 1.24
RHBDD3-205ENST00000488106 MIPEPQ99797 713 aa22.8■■□□□ 1.24
RHBDD3-205ENST00000488106 LRRC1Q9BTT6 524 aa22.8■■□□□ 1.24
RHBDD3-205ENST00000488106 SLC12A9Q9BXP2 914 aa22.8■■□□□ 1.24
RHBDD3-205ENST00000488106 LHX9Q9NQ69 397 aa22.8■■□□□ 1.24
RHBDD3-205ENST00000488106 IRAK4Q9NWZ3 460 aa22.8■■□□□ 1.24
RHBDD3-205ENST00000488106 SERTAD3Q9UJW9 196 aa22.8■■□□□ 1.24
RHBDD3-205ENST00000488106 PADI1Q9ULC6 663 aa22.8■■□□□ 1.24
RHBDD3-205ENST00000488106 ZNF891A8MT65 544 aaPredicted RBP22.79■■□□□ 1.24
RHBDD3-205ENST00000488106 EIF3HO15372 352 aaKnown RBP eCLIP22.79■■□□□ 1.24
RHBDD3-205ENST00000488106 PIAS1O75925 651 aa22.79■■□□□ 1.24
RHBDD3-205ENST00000488106 PRKAR1AP10644 381 aa22.79■■□□□ 1.24
RHBDD3-205ENST00000488106 F8A1P23610 371 aa22.79■■□□□ 1.24
RHBDD3-205ENST00000488106 SSTR1P30872 391 aa22.79■■□□□ 1.24
RHBDD3-205ENST00000488106 RGS4P49798 205 aa22.79■■□□□ 1.24
RHBDD3-205ENST00000488106 CAV1Q03135 178 aa22.79■■□□□ 1.24
RHBDD3-205ENST00000488106 GPS2Q13227 327 aa22.79■■□□□ 1.24
RHBDD3-205ENST00000488106 COL9A2Q14055 689 aaPredicted RBP22.79■■□□□ 1.24
RHBDD3-205ENST00000488106 CYP2A13Q16696 494 aa22.79■■□□□ 1.24
RHBDD3-205ENST00000488106 SOWAHCQ53LP3 525 aaPredicted RBP22.79■■□□□ 1.24
RHBDD3-205ENST00000488106 TAF1BQ53T94 588 aaPredicted RBP22.79■■□□□ 1.24
RHBDD3-205ENST00000488106 HECTD2Q5U5R9 776 aa22.79■■□□□ 1.24
RHBDD3-205ENST00000488106 ZDHHC24Q6UX98 284 aa22.79■■□□□ 1.24
RHBDD3-205ENST00000488106 UBE2R2Q712K3 238 aaPredicted RBP22.79■■□□□ 1.24
RHBDD3-205ENST00000488106 STRA8Q7Z7C7 330 aa22.79■■□□□ 1.24
RHBDD3-205ENST00000488106 GPR135Q8IZ08 494 aa22.79■■□□□ 1.24
RHBDD3-205ENST00000488106 SLC38A9Q8NBW4 561 aa22.79■■□□□ 1.24
RHBDD3-205ENST00000488106 HMGCLL1Q8TB92 370 aa22.79■■□□□ 1.24
RHBDD3-205ENST00000488106 STARD8Q92502 1023 aa22.79■■□□□ 1.24
RHBDD3-205ENST00000488106 LINGO1Q96FE5 620 aa22.79■■□□□ 1.24
RHBDD3-205ENST00000488106 SLC45A3Q96JT2 553 aa22.79■■□□□ 1.24
RHBDD3-205ENST00000488106 EFHD1Q9BUP0 239 aa22.79■■□□□ 1.24
RHBDD3-205ENST00000488106 ACAT2Q9BWD1 397 aa22.79■■□□□ 1.24
RHBDD3-205ENST00000488106 SLC7A5P2Q9GIP4 190 aa22.79■■□□□ 1.24
RHBDD3-205ENST00000488106 ACTR5Q9H9F9 607 aaPredicted RBP22.79■■□□□ 1.24
RHBDD3-205ENST00000488106 AKIRIN1Q9H9L7 192 aaPredicted RBP22.79■■□□□ 1.24
RHBDD3-205ENST00000488106 INTS7Q9NVH2 962 aaKnown RBP22.79■■□□□ 1.24
RHBDD3-205ENST00000488106 MOCS1Q9NZB8 636 aa22.79■■□□□ 1.24
RHBDD3-205ENST00000488106 CORO1CQ9ULV4 474 aaPredicted RBP22.79■■□□□ 1.24
RHBDD3-205ENST00000488106 PCDHB3Q9Y5E6 796 aa22.79■■□□□ 1.24
RHBDD3-205ENST00000488106 COL6A6A6NMZ7 2263 aa22.79■■□□□ 1.24
RHBDD3-205ENST00000488106 A0A1W2PPV9 198 aa22.78■■□□□ 1.24
RHBDD3-205ENST00000488106 E7EQ34 232 aa22.78■■□□□ 1.24
RHBDD3-205ENST00000488106 ERVH48-1M5A8F1 160 aa22.78■■□□□ 1.24
RHBDD3-205ENST00000488106 KIF2AO00139 706 aaPredicted RBP22.78■■□□□ 1.24
RHBDD3-205ENST00000488106 EIF3FO00303 357 aaPredicted RBP22.78■■□□□ 1.24
RHBDD3-205ENST00000488106 PRICKLE3O43900 615 aaPredicted RBP22.78■■□□□ 1.24
RHBDD3-205ENST00000488106 KATNA1O75449 491 aa22.78■■□□□ 1.24
RHBDD3-205ENST00000488106 OR2B3O76000 313 aa22.78■■□□□ 1.24
RHBDD3-205ENST00000488106 ERGP11308 486 aa22.78■■□□□ 1.24
RHBDD3-205ENST00000488106 SKIV2L2P42285 1042 aaKnown RBP22.78■■□□□ 1.24
RHBDD3-205ENST00000488106 GABRA4P48169 554 aa22.78■■□□□ 1.24
RHBDD3-205ENST00000488106 CBLBQ13191 982 aa22.78■■□□□ 1.24
RHBDD3-205ENST00000488106 LRRC8EQ6NSJ5 796 aa22.78■■□□□ 1.24
RHBDD3-205ENST00000488106 FAM45BPQ6NSW5 357 aa22.78■■□□□ 1.24
RHBDD3-205ENST00000488106 FAM199XQ6PEV8 388 aaPredicted RBP22.78■■□□□ 1.24
RHBDD3-205ENST00000488106 SUSD1Q6UWL2 747 aa22.78■■□□□ 1.24
RHBDD3-205ENST00000488106 CYHR1Q6ZMK1 362 aa22.78■■□□□ 1.24
RHBDD3-205ENST00000488106 PPFIBP2Q8ND30 876 aa22.78■■□□□ 1.24
RHBDD3-205ENST00000488106 FAM45AQ8TCE6 357 aa22.78■■□□□ 1.24
RHBDD3-205ENST00000488106 TTC9Q92623 222 aa22.78■■□□□ 1.24
RHBDD3-205ENST00000488106 MR1Q95460 341 aa22.78■■□□□ 1.24
RHBDD3-205ENST00000488106 OLFM1Q99784 485 aa22.78■■□□□ 1.24
RHBDD3-205ENST00000488106 CHRNA10Q9GZZ6 450 aa22.78■■□□□ 1.24
RHBDD3-205ENST00000488106 ABCF3Q9NUQ8 709 aa22.78■■□□□ 1.24
RHBDD3-205ENST00000488106 NUP210LQ5VU65 1888 aa22.77■■□□□ 1.24
RHBDD3-205ENST00000488106 GFYI3L273 518 aa22.77■■□□□ 1.24
RHBDD3-205ENST00000488106 ATXN7O15265 892 aaPredicted RBP22.77■■□□□ 1.24
RHBDD3-205ENST00000488106 ZNF749O43361 778 aa22.77■■□□□ 1.24
RHBDD3-205ENST00000488106 ZBTB14O43829 449 aa22.77■■□□□ 1.24
RHBDD3-205ENST00000488106 SLC16A8O95907 504 aa22.77■■□□□ 1.24
RHBDD3-205ENST00000488106 CTSBP07858 339 aa22.77■■□□□ 1.24
RHBDD3-205ENST00000488106 TCN2P20062 427 aa22.77■■□□□ 1.24
RHBDD3-205ENST00000488106 SAT1P21673 171 aa22.77■■□□□ 1.24
RHBDD3-205ENST00000488106 FDXRP22570 491 aa22.77■■□□□ 1.24
RHBDD3-205ENST00000488106 PNLIPRP1P54315 467 aa22.77■■□□□ 1.24
RHBDD3-205ENST00000488106 DNASE1L3Q13609 305 aa22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms