RNA–Protein interactions for RNA: ENST00000487876.1

RPSA-208, Transcript of ribosomal protein SA, humanhuman

TSL 4

Gene RPSA, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSA-208ENST00000487876 ZNF749O43361 778 aa12.42□□□□□ -0.42
RPSA-208ENST00000487876 PRICKLE3O43900 615 aaPredicted RBP12.42□□□□□ -0.42
RPSA-208ENST00000487876 NRP2O60462 931 aa12.42□□□□□ -0.42
RPSA-208ENST00000487876 PSIP1O75475 530 aaKnown RBP12.42□□□□□ -0.42
RPSA-208ENST00000487876 OR2B3O76000 313 aa12.42□□□□□ -0.42
RPSA-208ENST00000487876 TTC4O95801 387 aa12.42□□□□□ -0.42
RPSA-208ENST00000487876 CASQ1P31415 396 aa12.42□□□□□ -0.42
RPSA-208ENST00000487876 CCNFP41002 786 aa12.42□□□□□ -0.42
RPSA-208ENST00000487876 ETF1P62495 437 aaKnown RBP12.42□□□□□ -0.42
RPSA-208ENST00000487876 YBX1P67809 324 aaKnown RBP12.42□□□□□ -0.42
RPSA-208ENST00000487876 PDAP1Q13442 181 aaKnown RBP12.42□□□□□ -0.42
RPSA-208ENST00000487876 IL10RAQ13651 578 aa12.42□□□□□ -0.42
RPSA-208ENST00000487876 ERV3-1Q14264 604 aa12.42□□□□□ -0.42
RPSA-208ENST00000487876 FASTKD3Q14CZ7 662 aaKnown RBP12.42□□□□□ -0.42
RPSA-208ENST00000487876 HIF1AQ16665 826 aa12.42□□□□□ -0.42
RPSA-208ENST00000487876 DEFB109BQ30KR1 87 aa12.42□□□□□ -0.42
RPSA-208ENST00000487876 RBM20Q5T481 1227 aaKnown RBP12.42□□□□□ -0.42
RPSA-208ENST00000487876 FCRL6Q6DN72 434 aa12.42□□□□□ -0.42
RPSA-208ENST00000487876 TRMT10BQ6PF06 316 aaKnown RBP12.42□□□□□ -0.42
RPSA-208ENST00000487876 FAM198BQ6UWH4 519 aa12.42□□□□□ -0.42
RPSA-208ENST00000487876 ZNF517Q6ZMY9 492 aaPredicted RBP12.42□□□□□ -0.42
RPSA-208ENST00000487876 LMNTD2Q8IXW0 634 aa12.42□□□□□ -0.42
RPSA-208ENST00000487876 CPNE9Q8IYJ1 553 aa12.42□□□□□ -0.42
RPSA-208ENST00000487876 DSELQ8IZU8 1212 aa12.42□□□□□ -0.42
RPSA-208ENST00000487876 PDIK1LQ8N165 341 aa12.42□□□□□ -0.42
RPSA-208ENST00000487876 DNAJC22Q8N4W6 341 aa12.42□□□□□ -0.42
RPSA-208ENST00000487876 N4BP2L2Q92802 583 aaPredicted RBP12.42□□□□□ -0.42
RPSA-208ENST00000487876 CERS2Q96G23 380 aa12.42□□□□□ -0.42
RPSA-208ENST00000487876 AARSD1Q9BTE6 412 aaKnown RBP12.42□□□□□ -0.42
RPSA-208ENST00000487876 RAB11FIP5Q9BXF6 653 aa12.42□□□□□ -0.42
RPSA-208ENST00000487876 SYTL2Q9HCH5 934 aa12.42□□□□□ -0.42
RPSA-208ENST00000487876 RNF14Q9UBS8 474 aa12.42□□□□□ -0.42
RPSA-208ENST00000487876 ZC3H7BQ9UGR2 993 aaKnown RBP12.42□□□□□ -0.42
RPSA-208ENST00000487876 SERTAD3Q9UJW9 196 aa12.42□□□□□ -0.42
RPSA-208ENST00000487876 SNX24Q9Y343 169 aa12.42□□□□□ -0.42
RPSA-208ENST00000487876 PCDHGA6Q9Y5G7 932 aa12.42□□□□□ -0.42
RPSA-208ENST00000487876 PCSK5Q92824 1860 aa12.42□□□□□ -0.42
RPSA-208ENST00000487876 CDC14CA4D256 554 aa12.41□□□□□ -0.42
RPSA-208ENST00000487876 C21orf140B9A014 251 aa12.41□□□□□ -0.42
RPSA-208ENST00000487876 MYO1CO00159 1063 aa12.41□□□□□ -0.42
RPSA-208ENST00000487876 MEN1O00255 615 aa12.41□□□□□ -0.42
RPSA-208ENST00000487876 RAD51CO43502 376 aa12.41□□□□□ -0.42
RPSA-208ENST00000487876 CREG1O75629 220 aa12.41□□□□□ -0.42
RPSA-208ENST00000487876 MCM3P25205 808 aa12.41□□□□□ -0.42
RPSA-208ENST00000487876 GRIA3P42263 894 aa12.41□□□□□ -0.42
RPSA-208ENST00000487876 CARSP49589 748 aaKnown RBP12.41□□□□□ -0.42
RPSA-208ENST00000487876 PGGT1BP53609 377 aa12.41□□□□□ -0.42
RPSA-208ENST00000487876 CDKN2DP55273 166 aa12.41□□□□□ -0.42
RPSA-208ENST00000487876 POLE2P56282 527 aa12.41□□□□□ -0.42
RPSA-208ENST00000487876 NFKB2Q00653 900 aa12.41□□□□□ -0.42
RPSA-208ENST00000487876 SF1Q15637 639 aaKnown RBP12.41□□□□□ -0.42
RPSA-208ENST00000487876 CYP2A13Q16696 494 aa12.41□□□□□ -0.42
RPSA-208ENST00000487876 TTLL9Q3SXZ7 439 aa12.41□□□□□ -0.42
RPSA-208ENST00000487876 ZNF385CQ66K41 422 aaPredicted RBP12.41□□□□□ -0.42
RPSA-208ENST00000487876 STEAP4Q687X5 459 aa12.41□□□□□ -0.42
RPSA-208ENST00000487876 FIGLAQ6QHK4 219 aa12.41□□□□□ -0.42
RPSA-208ENST00000487876 PIWIL4Q7Z3Z4 852 aaKnown RBP12.41□□□□□ -0.42
RPSA-208ENST00000487876 CNTN4Q8IWV2 1026 aa12.41□□□□□ -0.42
RPSA-208ENST00000487876 SYTL1Q8IYJ3 562 aa12.41□□□□□ -0.42
RPSA-208ENST00000487876 GPR135Q8IZ08 494 aa12.41□□□□□ -0.42
RPSA-208ENST00000487876 SPATA4Q8NEY3 305 aa12.41□□□□□ -0.42
RPSA-208ENST00000487876 LRFN5Q96NI6 719 aa12.41□□□□□ -0.42
RPSA-208ENST00000487876 MIPEPQ99797 713 aa12.41□□□□□ -0.42
RPSA-208ENST00000487876 NAT9Q9BTE0 207 aa12.41□□□□□ -0.42
RPSA-208ENST00000487876 ACAT2Q9BWD1 397 aa12.41□□□□□ -0.42
RPSA-208ENST00000487876 DPH5Q9H2P9 285 aa12.41□□□□□ -0.42
RPSA-208ENST00000487876 PPANQ9NQ55 473 aaKnown RBP12.41□□□□□ -0.42
RPSA-208ENST00000487876 SPATA7Q9P0W8 599 aa12.41□□□□□ -0.42
RPSA-208ENST00000487876 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.41□□□□□ -0.42
RPSA-208ENST00000487876 MED13Q9UHV7 2174 aa12.41□□□□□ -0.42
RPSA-208ENST00000487876 KCND3Q9UK17 655 aa12.41□□□□□ -0.42
RPSA-208ENST00000487876 DHRS7Q9Y394 339 aa12.41□□□□□ -0.42
RPSA-208ENST00000487876 TNRC6AQ8NDV7 1962 aaKnown RBP12.4□□□□□ -0.42
RPSA-208ENST00000487876 ZSCAN9O15535 394 aaPredicted RBP12.4□□□□□ -0.42
RPSA-208ENST00000487876 VPS26AO75436 327 aa12.4□□□□□ -0.42
RPSA-208ENST00000487876 AHSGP02765 367 aa12.4□□□□□ -0.42
RPSA-208ENST00000487876 CATP04040 527 aaKnown RBP12.4□□□□□ -0.42
RPSA-208ENST00000487876 CAPN1P07384 714 aa12.4□□□□□ -0.42
RPSA-208ENST00000487876 CBSLP0DN79 551 aa12.4□□□□□ -0.42
RPSA-208ENST00000487876 ERGP11308 486 aa12.4□□□□□ -0.42
RPSA-208ENST00000487876 PTPN4P29074 926 aa12.4□□□□□ -0.42
RPSA-208ENST00000487876 CBSP35520 551 aa12.4□□□□□ -0.42
RPSA-208ENST00000487876 ARL4CP56559 192 aa12.4□□□□□ -0.42
RPSA-208ENST00000487876 MC1RQ01726 317 aa12.4□□□□□ -0.42
RPSA-208ENST00000487876 C19orf57Q0VDD7 668 aa12.4□□□□□ -0.42
RPSA-208ENST00000487876 PDIA2Q13087 525 aaKnown RBP12.4□□□□□ -0.42
RPSA-208ENST00000487876 CRTC2Q53ET0 693 aaPredicted RBP12.4□□□□□ -0.42
RPSA-208ENST00000487876 C1orf189Q5VU69 101 aa12.4□□□□□ -0.42
RPSA-208ENST00000487876 SUSD1Q6UWL2 747 aa12.4□□□□□ -0.42
RPSA-208ENST00000487876 CYHR1Q6ZMK1 362 aa12.4□□□□□ -0.42
RPSA-208ENST00000487876 RAB42Q8N4Z0 105 aa12.4□□□□□ -0.42
RPSA-208ENST00000487876 ZNF655Q8N720 491 aaPredicted RBP12.4□□□□□ -0.42
RPSA-208ENST00000487876 ENDOVQ8N8Q3 282 aaKnown RBP12.4□□□□□ -0.42
RPSA-208ENST00000487876 PPFIBP2Q8ND30 876 aa12.4□□□□□ -0.42
RPSA-208ENST00000487876 OR2L3Q8NG85 312 aa12.4□□□□□ -0.42
RPSA-208ENST00000487876 OR2A1Q8NGT9 310 aa12.4□□□□□ -0.42
RPSA-208ENST00000487876 OR9A1PQ8NGU1 263 aa12.4□□□□□ -0.42
RPSA-208ENST00000487876 HMGCLL1Q8TB92 370 aa12.4□□□□□ -0.42
RPSA-208ENST00000487876 ASB11Q8WXH4 323 aa12.4□□□□□ -0.42
RPSA-208ENST00000487876 INPP5DQ92835 1189 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms