RNA–Protein interactions for RNA: ENST00000487266.1

GABPA-203, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

TSL 2

Gene GABPA, Length 780 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-203ENST00000487266 PTPN4P29074 926 aa15.25■□□□□ 0.03
GABPA-203ENST00000487266 ATP5DP30049 168 aa15.25■□□□□ 0.03
GABPA-203ENST00000487266 CBSP35520 551 aa15.25■□□□□ 0.03
GABPA-203ENST00000487266 CHAF1BQ13112 559 aa15.25■□□□□ 0.03
GABPA-203ENST00000487266 SLC9A5Q14940 896 aa15.25■□□□□ 0.03
GABPA-203ENST00000487266 SF1Q15637 639 aaKnown RBP15.25■□□□□ 0.03
GABPA-203ENST00000487266 CRTC2Q53ET0 693 aaPredicted RBP15.25■□□□□ 0.03
GABPA-203ENST00000487266 CPZQ66K79 652 aa15.25■□□□□ 0.03
GABPA-203ENST00000487266 PRICKLE2Q7Z3G6 844 aa15.25■□□□□ 0.03
GABPA-203ENST00000487266 TMEM151BQ8IW70 566 aa15.25■□□□□ 0.03
GABPA-203ENST00000487266 CPNE9Q8IYJ1 553 aa15.25■□□□□ 0.03
GABPA-203ENST00000487266 GPR135Q8IZ08 494 aa15.25■□□□□ 0.03
GABPA-203ENST00000487266 DNAJC22Q8N4W6 341 aa15.25■□□□□ 0.03
GABPA-203ENST00000487266 CD200R1Q8TD46 325 aa15.25■□□□□ 0.03
GABPA-203ENST00000487266 CFAP36Q96G28 342 aa15.25■□□□□ 0.03
GABPA-203ENST00000487266 FOPNLQ96NB1 174 aa15.25■□□□□ 0.03
GABPA-203ENST00000487266 MIPEPQ99797 713 aa15.25■□□□□ 0.03
GABPA-203ENST00000487266 EBNA1BP2Q99848 306 aaKnown RBP15.25■□□□□ 0.03
GABPA-203ENST00000487266 IRAK4Q9NWZ3 460 aa15.25■□□□□ 0.03
GABPA-203ENST00000487266 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.25■□□□□ 0.03
GABPA-203ENST00000487266 VPS9D1Q9Y2B5 631 aa15.25■□□□□ 0.03
GABPA-203ENST00000487266 KCNMB2Q9Y691 235 aa15.25■□□□□ 0.03
GABPA-203ENST00000487266 TNRC6AQ8NDV7 1962 aaKnown RBP15.25■□□□□ 0.03
GABPA-203ENST00000487266 GCN1Q92616 2671 aaKnown RBP15.25■□□□□ 0.03
GABPA-203ENST00000487266 PCM1Q15154 2024 aa15.24■□□□□ 0.03
GABPA-203ENST00000487266 SPTA1P02549 2419 aa15.24■□□□□ 0.03
GABPA-203ENST00000487266 MED13Q9UHV7 2174 aa15.24■□□□□ 0.03
GABPA-203ENST00000487266 A0A1W2PPV9 198 aa15.24■□□□□ 0.03
GABPA-203ENST00000487266 TP73O15350 636 aa15.24■□□□□ 0.03
GABPA-203ENST00000487266 ZSCAN9O15535 394 aaPredicted RBP15.24■□□□□ 0.03
GABPA-203ENST00000487266 NR1D1P20393 614 aa15.24■□□□□ 0.03
GABPA-203ENST00000487266 MCM3P25205 808 aa15.24■□□□□ 0.03
GABPA-203ENST00000487266 GABRB3P28472 473 aa15.24■□□□□ 0.03
GABPA-203ENST00000487266 ELK3P41970 407 aa15.24■□□□□ 0.03
GABPA-203ENST00000487266 PGGT1BP53609 377 aa15.24■□□□□ 0.03
GABPA-203ENST00000487266 ITGA8P53708 1063 aa15.24■□□□□ 0.03
GABPA-203ENST00000487266 COLEC12Q5KU26 742 aa15.24■□□□□ 0.03
GABPA-203ENST00000487266 RBM20Q5T481 1227 aaKnown RBP15.24■□□□□ 0.03
GABPA-203ENST00000487266 HIBCHQ6NVY1 386 aaPredicted RBP15.24■□□□□ 0.03
GABPA-203ENST00000487266 TTC23LQ6PF05 361 aa15.24■□□□□ 0.03
GABPA-203ENST00000487266 SUSD1Q6UWL2 747 aa15.24■□□□□ 0.03
GABPA-203ENST00000487266 PCGF5Q86SE9 256 aa15.24■□□□□ 0.03
GABPA-203ENST00000487266 PTRH1Q86Y79 214 aaKnown RBP15.24■□□□□ 0.03
GABPA-203ENST00000487266 DTWD1Q8N5C7 304 aa15.24■□□□□ 0.03
GABPA-203ENST00000487266 C2CD4AQ8NCU7 369 aaPredicted RBP15.24■□□□□ 0.03
GABPA-203ENST00000487266 PPFIBP2Q8ND30 876 aa15.24■□□□□ 0.03
GABPA-203ENST00000487266 APOBEC4Q8WW27 367 aaKnown RBP15.24■□□□□ 0.03
GABPA-203ENST00000487266 KCNJ9Q92806 393 aa15.24■□□□□ 0.03
GABPA-203ENST00000487266 KRT12Q99456 494 aa15.24■□□□□ 0.03
GABPA-203ENST00000487266 FAM167BQ9BTA0 163 aa15.24■□□□□ 0.03
GABPA-203ENST00000487266 AARSD1Q9BTE6 412 aaKnown RBP15.24■□□□□ 0.03
GABPA-203ENST00000487266 ACAT2Q9BWD1 397 aa15.24■□□□□ 0.03
GABPA-203ENST00000487266 RAB11FIP5Q9BXF6 653 aa15.24■□□□□ 0.03
GABPA-203ENST00000487266 TRIM55Q9BYV6 548 aa15.24■□□□□ 0.03
GABPA-203ENST00000487266 CHRNA10Q9GZZ6 450 aa15.24■□□□□ 0.03
GABPA-203ENST00000487266 SLC25A18Q9H1K4 315 aa15.24■□□□□ 0.03
GABPA-203ENST00000487266 CCDC68Q9H2F9 335 aa15.24■□□□□ 0.03
GABPA-203ENST00000487266 ZNF71Q9NQZ8 489 aaPredicted RBP15.24■□□□□ 0.03
GABPA-203ENST00000487266 EURLQ9NYK6 297 aa15.24■□□□□ 0.03
GABPA-203ENST00000487266 POLHQ9Y253 713 aa15.24■□□□□ 0.03
GABPA-203ENST00000487266 MAN2B2Q9Y2E5 1009 aa15.24■□□□□ 0.03
GABPA-203ENST00000487266 ANKRD12Q6UB98 2062 aa15.24■□□□□ 0.03
GABPA-203ENST00000487266 HEATR5BQ9P2D3 2071 aa15.23■□□□□ 0.03
GABPA-203ENST00000487266 K7EM74 188 aa15.23■□□□□ 0.03
GABPA-203ENST00000487266 SLC28A2O43868 658 aa15.23■□□□□ 0.03
GABPA-203ENST00000487266 CTSVO60911 334 aa15.23■□□□□ 0.03
GABPA-203ENST00000487266 PSIP1O75475 530 aaKnown RBP15.23■□□□□ 0.03
GABPA-203ENST00000487266 SEC31AO94979 1220 aaKnown RBP15.23■□□□□ 0.03
GABPA-203ENST00000487266 CCNFP41002 786 aa15.23■□□□□ 0.03
GABPA-203ENST00000487266 CARSP49589 748 aaKnown RBP15.23■□□□□ 0.03
GABPA-203ENST00000487266 RPS15P62841 145 aaKnown RBP15.23■□□□□ 0.03
GABPA-203ENST00000487266 TIAL1Q01085 375 aaKnown RBP eCLIP15.23■□□□□ 0.03
GABPA-203ENST00000487266 TSTA3Q13630 321 aaPredicted RBP15.23■□□□□ 0.03
GABPA-203ENST00000487266 FASTKD3Q14CZ7 662 aaKnown RBP15.23■□□□□ 0.03
GABPA-203ENST00000487266 MORF4L2Q15014 288 aa15.23■□□□□ 0.03
GABPA-203ENST00000487266 UGT8Q16880 541 aa15.23■□□□□ 0.03
GABPA-203ENST00000487266 TRMT10BQ6PF06 316 aaKnown RBP15.23■□□□□ 0.03
GABPA-203ENST00000487266 FIGLAQ6QHK4 219 aa15.23■□□□□ 0.03
GABPA-203ENST00000487266 PIWIL4Q7Z3Z4 852 aaKnown RBP15.23■□□□□ 0.03
GABPA-203ENST00000487266 SYVN1Q86TM6 617 aa15.23■□□□□ 0.03
GABPA-203ENST00000487266 ANKMY2Q8IV38 441 aa15.23■□□□□ 0.03
GABPA-203ENST00000487266 OR2L3Q8NG85 312 aa15.23■□□□□ 0.03
GABPA-203ENST00000487266 OR2A1Q8NGT9 310 aa15.23■□□□□ 0.03
GABPA-203ENST00000487266 CALML6Q8TD86 181 aa15.23■□□□□ 0.03
GABPA-203ENST00000487266 SLC22A18Q96BI1 424 aa15.23■□□□□ 0.03
GABPA-203ENST00000487266 PKP4Q99569 1192 aa15.23■□□□□ 0.03
GABPA-203ENST00000487266 GPR87Q9BY21 358 aa15.23■□□□□ 0.03
GABPA-203ENST00000487266 TRIM4Q9C037 500 aa15.23■□□□□ 0.03
GABPA-203ENST00000487266 ADNPQ9H2P0 1102 aa15.23■□□□□ 0.03
GABPA-203ENST00000487266 SLC6A20Q9NP91 592 aa15.23■□□□□ 0.03
GABPA-203ENST00000487266 SPATA7Q9P0W8 599 aa15.23■□□□□ 0.03
GABPA-203ENST00000487266 SNX7Q9UNH6 387 aa15.23■□□□□ 0.03
GABPA-203ENST00000487266 PLCL2Q9UPR0 1127 aa15.23■□□□□ 0.03
GABPA-203ENST00000487266 FARSAQ9Y285 508 aaKnown RBP15.23■□□□□ 0.03
GABPA-203ENST00000487266 CCDC188H7C350 402 aa15.22■□□□□ 0.03
GABPA-203ENST00000487266 MYO1CO00159 1063 aa15.22■□□□□ 0.03
GABPA-203ENST00000487266 ITGAXP20702 1163 aa15.22■□□□□ 0.03
GABPA-203ENST00000487266 PAFAH1B1P43034 410 aa15.22■□□□□ 0.03
GABPA-203ENST00000487266 RPL21P46778 160 aaKnown RBP15.22■□□□□ 0.03
GABPA-203ENST00000487266 CDKN2DP55273 166 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms