RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 CEACAM1P13688 526 aa12.8□□□□□ -0.36
HDAC1-208ENST00000482310 HOXB3P14651 431 aaPredicted RBP12.8□□□□□ -0.36
HDAC1-208ENST00000482310 PEBP1P30086 187 aaKnown RBP12.8□□□□□ -0.36
HDAC1-208ENST00000482310 SLC26A3P40879 764 aa12.8□□□□□ -0.36
HDAC1-208ENST00000482310 AGTR2P50052 363 aa12.8□□□□□ -0.36
HDAC1-208ENST00000482310 TBPL1P62380 186 aa12.8□□□□□ -0.36
HDAC1-208ENST00000482310 GPLD1P80108 840 aa12.8□□□□□ -0.36
HDAC1-208ENST00000482310 CFHR1Q03591 330 aa12.8□□□□□ -0.36
HDAC1-208ENST00000482310 NAE1Q13564 534 aa12.8□□□□□ -0.36
HDAC1-208ENST00000482310 PHF19Q5T6S3 580 aa12.8□□□□□ -0.36
HDAC1-208ENST00000482310 ANKS6Q68DC2 871 aa12.8□□□□□ -0.36
HDAC1-208ENST00000482310 KLHL35Q6PF15 583 aa12.8□□□□□ -0.36
HDAC1-208ENST00000482310 AGTRAPQ6RW13 159 aa12.8□□□□□ -0.36
HDAC1-208ENST00000482310 CROCCP2Q86T23 111 aa12.8□□□□□ -0.36
HDAC1-208ENST00000482310 EXOC3L1Q86VI1 746 aa12.8□□□□□ -0.36
HDAC1-208ENST00000482310 RASGRP3Q8IV61 690 aa12.8□□□□□ -0.36
HDAC1-208ENST00000482310 GOLGA6L1Q8N7Z2 621 aa12.8□□□□□ -0.36
HDAC1-208ENST00000482310 OR2L8Q8NGY9 312 aa12.8□□□□□ -0.36
HDAC1-208ENST00000482310 ZFPM2Q8WW38 1151 aa12.8□□□□□ -0.36
HDAC1-208ENST00000482310 ARL8AQ96BM9 186 aa12.8□□□□□ -0.36
HDAC1-208ENST00000482310 CCDC138Q96M89 665 aa12.8□□□□□ -0.36
HDAC1-208ENST00000482310 ATOH8Q96SQ7 321 aa12.8□□□□□ -0.36
HDAC1-208ENST00000482310 KCNK9Q9NPC2 374 aa12.8□□□□□ -0.36
HDAC1-208ENST00000482310 ACSS2Q9NR19 701 aa12.8□□□□□ -0.36
HDAC1-208ENST00000482310 NUDT4Q9NZJ9 180 aa12.8□□□□□ -0.36
HDAC1-208ENST00000482310 TAC3Q9UHF0 121 aa12.8□□□□□ -0.36
HDAC1-208ENST00000482310 DCDC2Q9UHG0 476 aa12.8□□□□□ -0.36
HDAC1-208ENST00000482310 APOBEC2Q9Y235 224 aaKnown RBP12.8□□□□□ -0.36
HDAC1-208ENST00000482310 CFAP47Q6ZTR5 3102 aa12.79□□□□□ -0.36
HDAC1-208ENST00000482310 LRRC14BA6NHZ5 514 aa12.79□□□□□ -0.36
HDAC1-208ENST00000482310 SYCE1LA8MT33 242 aa12.79□□□□□ -0.36
HDAC1-208ENST00000482310 C2orf74A8MZ97 194 aa12.79□□□□□ -0.36
HDAC1-208ENST00000482310 D6RAR5 112 aa12.79□□□□□ -0.36
HDAC1-208ENST00000482310 KIF1CO43896 1103 aaKnown RBP12.79□□□□□ -0.36
HDAC1-208ENST00000482310 SMIM24O75264 130 aa12.79□□□□□ -0.36
HDAC1-208ENST00000482310 WDR47O94967 919 aa12.79□□□□□ -0.36
HDAC1-208ENST00000482310 ADRB1P08588 477 aa12.79□□□□□ -0.36
HDAC1-208ENST00000482310 RBP1P09455 135 aa12.79□□□□□ -0.36
HDAC1-208ENST00000482310 PVRP15151 417 aa12.79□□□□□ -0.36
HDAC1-208ENST00000482310 UGT2B7P16662 529 aa12.79□□□□□ -0.36
HDAC1-208ENST00000482310 CDH3P22223 829 aa12.79□□□□□ -0.36
HDAC1-208ENST00000482310 RPA3P35244 121 aaPredicted RBP12.79□□□□□ -0.36
HDAC1-208ENST00000482310 GDF5P43026 501 aa12.79□□□□□ -0.36
HDAC1-208ENST00000482310 HSPA7P48741 367 aa12.79□□□□□ -0.36
HDAC1-208ENST00000482310 SEPHS1P49903 392 aa12.79□□□□□ -0.36
HDAC1-208ENST00000482310 AP1S2P56377 157 aa12.79□□□□□ -0.36
HDAC1-208ENST00000482310 MAGOHP61326 146 aaKnown RBP12.79□□□□□ -0.36
HDAC1-208ENST00000482310 INSM1Q01101 510 aaPredicted RBP12.79□□□□□ -0.36
HDAC1-208ENST00000482310 SLC18A2Q05940 514 aa12.79□□□□□ -0.36
HDAC1-208ENST00000482310 PFKFB4Q16877 469 aa12.79□□□□□ -0.36
HDAC1-208ENST00000482310 HES3Q5TGS1 186 aa12.79□□□□□ -0.36
HDAC1-208ENST00000482310 SH2D5Q6ZV89 423 aa12.79□□□□□ -0.36
HDAC1-208ENST00000482310 B3GNT8Q7Z7M8 397 aa12.79□□□□□ -0.36
HDAC1-208ENST00000482310 GLRX5Q86SX6 157 aa12.79□□□□□ -0.36
HDAC1-208ENST00000482310 MARCH9Q86YJ5 346 aa12.79□□□□□ -0.36
HDAC1-208ENST00000482310 FBXO39Q8N4B4 442 aa12.79□□□□□ -0.36
HDAC1-208ENST00000482310 FBXO15Q8NCQ5 510 aaPredicted RBP12.79□□□□□ -0.36
HDAC1-208ENST00000482310 RCBTB1Q8NDN9 531 aa12.79□□□□□ -0.36
HDAC1-208ENST00000482310 RHBDF1Q96CC6 855 aa12.79□□□□□ -0.36
HDAC1-208ENST00000482310 FBXL8Q96CD0 374 aa12.79□□□□□ -0.36
HDAC1-208ENST00000482310 PHF21BQ96EK2 531 aa12.79□□□□□ -0.36
HDAC1-208ENST00000482310 PGM2Q96G03 612 aa12.79□□□□□ -0.36
HDAC1-208ENST00000482310 MIPEPQ99797 713 aa12.79□□□□□ -0.36
HDAC1-208ENST00000482310 SELENOSQ9BQE4 189 aa12.79□□□□□ -0.36
HDAC1-208ENST00000482310 STMN4Q9H169 189 aaPredicted RBP12.79□□□□□ -0.36
HDAC1-208ENST00000482310 MRPL46Q9H2W6 279 aaKnown RBP12.79□□□□□ -0.36
HDAC1-208ENST00000482310 ACBD3Q9H3P7 528 aa12.79□□□□□ -0.36
HDAC1-208ENST00000482310 SEMA6CQ9H3T2 930 aa12.79□□□□□ -0.36
HDAC1-208ENST00000482310 VIPAS39Q9H9C1 493 aa12.79□□□□□ -0.36
HDAC1-208ENST00000482310 CCDC177Q9NQR7 707 aaPredicted RBP12.79□□□□□ -0.36
HDAC1-208ENST00000482310 SLC17A7Q9P2U7 560 aa12.79□□□□□ -0.36
HDAC1-208ENST00000482310 EMCNQ9ULC0 261 aa12.79□□□□□ -0.36
HDAC1-208ENST00000482310 KLHL20Q9Y2M5 609 aa12.79□□□□□ -0.36
HDAC1-208ENST00000482310 CHD8Q9HCK8 2581 aa12.78□□□□□ -0.36
HDAC1-208ENST00000482310 FAM149AA5PLN7 773 aa12.78□□□□□ -0.36
HDAC1-208ENST00000482310 ZNF839A8K0R7 811 aa12.78□□□□□ -0.36
HDAC1-208ENST00000482310 MAP2K7O14733 419 aa12.78□□□□□ -0.36
HDAC1-208ENST00000482310 TAPBPO15533 448 aa12.78□□□□□ -0.36
HDAC1-208ENST00000482310 CCNT2O60583 730 aaKnown RBP12.78□□□□□ -0.36
HDAC1-208ENST00000482310 CPNE6O95741 557 aa12.78□□□□□ -0.36
HDAC1-208ENST00000482310 GSTA1P08263 222 aa12.78□□□□□ -0.36
HDAC1-208ENST00000482310 SPTBP11277 2137 aa12.78□□□□□ -0.36
HDAC1-208ENST00000482310 SDHBP21912 280 aa12.78□□□□□ -0.36
HDAC1-208ENST00000482310 CRHR1P34998 444 aa12.78□□□□□ -0.36
HDAC1-208ENST00000482310 CCT5P48643 541 aa12.78□□□□□ -0.36
HDAC1-208ENST00000482310 YBX1P67809 324 aaKnown RBP12.78□□□□□ -0.36
HDAC1-208ENST00000482310 SF1Q15637 639 aaKnown RBP12.78□□□□□ -0.36
HDAC1-208ENST00000482310 CYP2A13Q16696 494 aa12.78□□□□□ -0.36
HDAC1-208ENST00000482310 PTCHD3Q3KNS1 767 aa12.78□□□□□ -0.36
HDAC1-208ENST00000482310 TTMPQ5BVD1 217 aa12.78□□□□□ -0.36
HDAC1-208ENST00000482310 PRAMEF13Q5VWM6 474 aa12.78□□□□□ -0.36
HDAC1-208ENST00000482310 RBM44Q6ZP01 1051 aaKnown RBP12.78□□□□□ -0.36
HDAC1-208ENST00000482310 PTGR2Q8N8N7 351 aaPredicted RBP12.78□□□□□ -0.36
HDAC1-208ENST00000482310 ANKRD42Q8N9B4 389 aa12.78□□□□□ -0.36
HDAC1-208ENST00000482310 BANPQ8N9N5 519 aa12.78□□□□□ -0.36
HDAC1-208ENST00000482310 SNX31Q8N9S9 440 aa12.78□□□□□ -0.36
HDAC1-208ENST00000482310 ARMC2Q8NEN0 867 aa12.78□□□□□ -0.36
HDAC1-208ENST00000482310 RHEBL1Q8TAI7 183 aa12.78□□□□□ -0.36
HDAC1-208ENST00000482310 TCP10LQ8TDR4 215 aa12.78□□□□□ -0.36
HDAC1-208ENST00000482310 SMPDL3AQ92484 453 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms