RNA–Protein interactions for RNA: ENST00000475146.1

CPNE1-223, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 627 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-223ENST00000475146 CHRNA10Q9GZZ6 450 aa23.14■■□□□ 1.29
CPNE1-223ENST00000475146 AKIRIN1Q9H9L7 192 aaPredicted RBP23.14■■□□□ 1.29
CPNE1-223ENST00000475146 ZNF749O43361 778 aa23.13■■□□□ 1.29
CPNE1-223ENST00000475146 SNRNP200O75643 2136 aaKnown RBP23.13■■□□□ 1.29
CPNE1-223ENST00000475146 MPC1LP0DKB6 136 aa23.13■■□□□ 1.29
CPNE1-223ENST00000475146 MCM3P25205 808 aa23.13■■□□□ 1.29
CPNE1-223ENST00000475146 PSMB5P28074 263 aa23.13■■□□□ 1.29
CPNE1-223ENST00000475146 ATP1A1-AS1Q5TC04 95 aa23.13■■□□□ 1.29
CPNE1-223ENST00000475146 STEAP4Q687X5 459 aa23.13■■□□□ 1.29
CPNE1-223ENST00000475146 UGT3A1Q6NUS8 523 aa23.13■■□□□ 1.29
CPNE1-223ENST00000475146 BORAQ6PGQ7 559 aa23.13■■□□□ 1.29
CPNE1-223ENST00000475146 FBXO36Q8NEA4 188 aa23.13■■□□□ 1.29
CPNE1-223ENST00000475146 HMGCLL1Q8TB92 370 aa23.13■■□□□ 1.29
CPNE1-223ENST00000475146 LRFN5Q96NI6 719 aa23.13■■□□□ 1.29
CPNE1-223ENST00000475146 ERP44Q9BS26 406 aa23.13■■□□□ 1.29
CPNE1-223ENST00000475146 SPTBP11277 2137 aa23.12■■□□□ 1.29
CPNE1-223ENST00000475146 MYO1CO00159 1063 aa23.12■■□□□ 1.29
CPNE1-223ENST00000475146 MEN1O00255 615 aa23.12■■□□□ 1.29
CPNE1-223ENST00000475146 HCRTR1O43613 425 aa23.12■■□□□ 1.29
CPNE1-223ENST00000475146 CBSLP0DN79 551 aa23.12■■□□□ 1.29
CPNE1-223ENST00000475146 GABRB3P28472 473 aa23.12■■□□□ 1.29
CPNE1-223ENST00000475146 CBSP35520 551 aa23.12■■□□□ 1.29
CPNE1-223ENST00000475146 GABRA4P48169 554 aa23.12■■□□□ 1.29
CPNE1-223ENST00000475146 RPS15P62841 145 aaKnown RBP23.12■■□□□ 1.29
CPNE1-223ENST00000475146 TSTA3Q13630 321 aaPredicted RBP23.12■■□□□ 1.29
CPNE1-223ENST00000475146 FASTKQ14296 549 aaKnown RBP23.12■■□□□ 1.29
CPNE1-223ENST00000475146 FASTKD3Q14CZ7 662 aaKnown RBP23.12■■□□□ 1.29
CPNE1-223ENST00000475146 CYP2A13Q16696 494 aa23.12■■□□□ 1.29
CPNE1-223ENST00000475146 RBM20Q5T481 1227 aaKnown RBP23.12■■□□□ 1.29
CPNE1-223ENST00000475146 TEDDM1Q5T9Z0 273 aa23.12■■□□□ 1.29
CPNE1-223ENST00000475146 PIWIL4Q7Z3Z4 852 aaKnown RBP23.12■■□□□ 1.29
CPNE1-223ENST00000475146 DNAJC22Q8N4W6 341 aa23.12■■□□□ 1.29
CPNE1-223ENST00000475146 RUFY1Q96T51 708 aa23.12■■□□□ 1.29
CPNE1-223ENST00000475146 MIPEPQ99797 713 aa23.12■■□□□ 1.29
CPNE1-223ENST00000475146 SEMA4CQ9C0C4 833 aa23.12■■□□□ 1.29
CPNE1-223ENST00000475146 SPRTNQ9H040 489 aaPredicted RBP23.12■■□□□ 1.29
CPNE1-223ENST00000475146 CHST8Q9H2A9 424 aa23.12■■□□□ 1.29
CPNE1-223ENST00000475146 PCMTD2Q9NV79 361 aa23.12■■□□□ 1.29
CPNE1-223ENST00000475146 TAS2R13Q9NYV9 303 aa23.12■■□□□ 1.29
CPNE1-223ENST00000475146 PLCL2Q9UPR0 1127 aa23.12■■□□□ 1.29
CPNE1-223ENST00000475146 PCDHGA6Q9Y5G7 932 aa23.12■■□□□ 1.29
CPNE1-223ENST00000475146 LOC400499M0QZD8 3231 aa23.12■■□□□ 1.29
CPNE1-223ENST00000475146 FKBP9O95302 570 aa23.11■■□□□ 1.29
CPNE1-223ENST00000475146 SYF2O95926 243 aaKnown RBP23.11■■□□□ 1.29
CPNE1-223ENST00000475146 AHSGP02765 367 aa23.11■■□□□ 1.29
CPNE1-223ENST00000475146 HBQ1P09105 142 aa23.11■■□□□ 1.29
CPNE1-223ENST00000475146 FAM87AP0C7U9 286 aa23.11■■□□□ 1.29
CPNE1-223ENST00000475146 RORAP35398 523 aa23.11■■□□□ 1.29
CPNE1-223ENST00000475146 ERV3-1Q14264 604 aa23.11■■□□□ 1.29
CPNE1-223ENST00000475146 FIGLAQ6QHK4 219 aa23.11■■□□□ 1.29
CPNE1-223ENST00000475146 SYTL1Q8IYJ3 562 aa23.11■■□□□ 1.29
CPNE1-223ENST00000475146 DSELQ8IZU8 1212 aa23.11■■□□□ 1.29
CPNE1-223ENST00000475146 GPATCH11Q8N954 259 aa23.11■■□□□ 1.29
CPNE1-223ENST00000475146 MED8Q96G25 268 aa23.11■■□□□ 1.29
CPNE1-223ENST00000475146 PKP4Q99569 1192 aa23.11■■□□□ 1.29
CPNE1-223ENST00000475146 ACTL8Q9H568 366 aa23.11■■□□□ 1.29
CPNE1-223ENST00000475146 WHRNQ9P202 907 aa23.11■■□□□ 1.29
CPNE1-223ENST00000475146 AP1M2Q9Y6Q5 423 aa23.11■■□□□ 1.29
CPNE1-223ENST00000475146 E7ESA3 106 aa23.1■■□□□ 1.29
CPNE1-223ENST00000475146 ZSCAN9O15535 394 aaPredicted RBP23.1■■□□□ 1.29
CPNE1-223ENST00000475146 PRICKLE3O43900 615 aaPredicted RBP23.1■■□□□ 1.29
CPNE1-223ENST00000475146 CREG1O75629 220 aa23.1■■□□□ 1.29
CPNE1-223ENST00000475146 C1QL1O75973 258 aa23.1■■□□□ 1.29
CPNE1-223ENST00000475146 RGS4P49798 205 aa23.1■■□□□ 1.29
CPNE1-223ENST00000475146 RPS18P62269 152 aaKnown RBP23.1■■□□□ 1.29
CPNE1-223ENST00000475146 CKAP4Q07065 602 aaKnown RBP23.1■■□□□ 1.29
CPNE1-223ENST00000475146 DEFB109BQ30KR1 87 aa23.1■■□□□ 1.29
CPNE1-223ENST00000475146 PTCHD3Q3KNS1 767 aa23.1■■□□□ 1.29
CPNE1-223ENST00000475146 CRTC2Q53ET0 693 aaPredicted RBP23.1■■□□□ 1.29
CPNE1-223ENST00000475146 GALNT7Q86SF2 657 aa23.1■■□□□ 1.29
CPNE1-223ENST00000475146 ZBED8Q8IZ13 594 aa23.1■■□□□ 1.29
CPNE1-223ENST00000475146 ZNF655Q8N720 491 aaPredicted RBP23.1■■□□□ 1.29
CPNE1-223ENST00000475146 EXD3Q8N9H8 876 aa23.1■■□□□ 1.29
CPNE1-223ENST00000475146 OR2L3Q8NG85 312 aa23.1■■□□□ 1.29
CPNE1-223ENST00000475146 ASB11Q8WXH4 323 aa23.1■■□□□ 1.29
CPNE1-223ENST00000475146 SMPDL3AQ92484 453 aa23.1■■□□□ 1.29
CPNE1-223ENST00000475146 ACAT2Q9BWD1 397 aa23.1■■□□□ 1.29
CPNE1-223ENST00000475146 GPR87Q9BY21 358 aa23.1■■□□□ 1.29
CPNE1-223ENST00000475146 EURLQ9NYK6 297 aa23.1■■□□□ 1.29
CPNE1-223ENST00000475146 ZFATQ9P243 1243 aa23.1■■□□□ 1.29
CPNE1-223ENST00000475146 UTP11Q9Y3A2 253 aaKnown RBP23.1■■□□□ 1.29
CPNE1-223ENST00000475146 A0A1W2PPV9 198 aa23.09■■□□□ 1.29
CPNE1-223ENST00000475146 CDC14CA4D256 554 aa23.09■■□□□ 1.29
CPNE1-223ENST00000475146 ZNF839A8K0R7 811 aa23.09■■□□□ 1.29
CPNE1-223ENST00000475146 EIF3FO00303 357 aaPredicted RBP23.09■■□□□ 1.29
CPNE1-223ENST00000475146 ZBTB14O43829 449 aa23.09■■□□□ 1.29
CPNE1-223ENST00000475146 CTSBP07858 339 aa23.09■■□□□ 1.29
CPNE1-223ENST00000475146 ERGP11308 486 aa23.09■■□□□ 1.29
CPNE1-223ENST00000475146 PTPN4P29074 926 aa23.09■■□□□ 1.29
CPNE1-223ENST00000475146 RPA3P35244 121 aaPredicted RBP23.09■■□□□ 1.29
CPNE1-223ENST00000475146 HSD17B2P37059 387 aa23.09■■□□□ 1.29
CPNE1-223ENST00000475146 GRIA3P42263 894 aa23.09■■□□□ 1.29
CPNE1-223ENST00000475146 SKIV2L2P42285 1042 aaKnown RBP23.09■■□□□ 1.29
CPNE1-223ENST00000475146 CCR10P46092 362 aa23.09■■□□□ 1.29
CPNE1-223ENST00000475146 CDKN2DP55273 166 aa23.09■■□□□ 1.29
CPNE1-223ENST00000475146 MGAT5Q09328 741 aa23.09■■□□□ 1.29
CPNE1-223ENST00000475146 C19orf57Q0VDD7 668 aa23.09■■□□□ 1.29
CPNE1-223ENST00000475146 ARHGAP19Q14CB8 494 aa23.09■■□□□ 1.29
CPNE1-223ENST00000475146 ZC3H12BQ5HYM0 836 aaKnown RBP23.09■■□□□ 1.29
CPNE1-223ENST00000475146 FCRL6Q6DN72 434 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms