RNA–Protein interactions for RNA: ENST00000473778.5

C9orf3-214, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 2,396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-214ENST00000473778 SMAD3P84022 425 aaKnown RBP10.67□□□□□ -0.7
C9orf3-214ENST00000473778 LRIF1Q5T3J3 769 aa10.67□□□□□ -0.7
C9orf3-214ENST00000473778 RNF180Q86T96 592 aa10.67□□□□□ -0.7
C9orf3-214ENST00000473778 SNX29P2Q8IUI4 249 aa10.67□□□□□ -0.7
C9orf3-214ENST00000473778 TERB1Q8NA31 727 aa10.67□□□□□ -0.7
C9orf3-214ENST00000473778 OR52E4Q8NGH9 312 aa10.67□□□□□ -0.7
C9orf3-214ENST00000473778 UBTD2Q8WUN7 234 aa10.67□□□□□ -0.7
C9orf3-214ENST00000473778 SDCCAG3Q96C92 435 aa10.67□□□□□ -0.7
C9orf3-214ENST00000473778 RDH12Q96NR8 316 aa10.67□□□□□ -0.7
C9orf3-214ENST00000473778 ZBTB18Q99592 522 aa10.67□□□□□ -0.7
C9orf3-214ENST00000473778 ALOXE3Q9BYJ1 711 aa10.67□□□□□ -0.7
C9orf3-214ENST00000473778 C1orf109Q9NX04 203 aa10.67□□□□□ -0.7
C9orf3-214ENST00000473778 SELENONQ9NZV5 590 aa10.67□□□□□ -0.7
C9orf3-214ENST00000473778 TRPS1Q9UHF7 1281 aa10.67□□□□□ -0.7
C9orf3-214ENST00000473778 STOML2Q9UJZ1 356 aa10.67□□□□□ -0.7
C9orf3-214ENST00000473778 NAALAD2Q9Y3Q0 740 aa10.67□□□□□ -0.7
C9orf3-214ENST00000473778 GLYATL1P3A0A0U1RQE8 302 aa10.66□□□□□ -0.7
C9orf3-214ENST00000473778 H7C4K7 107 aa10.66□□□□□ -0.7
C9orf3-214ENST00000473778 SLC28A1O00337 649 aa10.66□□□□□ -0.7
C9orf3-214ENST00000473778 GFRA2O00451 464 aa10.66□□□□□ -0.7
C9orf3-214ENST00000473778 NDUFB5O43674 189 aa10.66□□□□□ -0.7
C9orf3-214ENST00000473778 GMNNO75496 209 aa10.66□□□□□ -0.7
C9orf3-214ENST00000473778 SCELO95171 688 aa10.66□□□□□ -0.7
C9orf3-214ENST00000473778 FTH1P02794 183 aa10.66□□□□□ -0.7
C9orf3-214ENST00000473778 CYP4B1P13584 511 aa10.66□□□□□ -0.7
C9orf3-214ENST00000473778 CCR7P32248 378 aa10.66□□□□□ -0.7
C9orf3-214ENST00000473778 OPRL1P41146 370 aa10.66□□□□□ -0.7
C9orf3-214ENST00000473778 TMED10P49755 219 aaKnown RBP10.66□□□□□ -0.7
C9orf3-214ENST00000473778 RGS4P49798 205 aa10.66□□□□□ -0.7
C9orf3-214ENST00000473778 RPS14P62263 151 aaKnown RBP10.66□□□□□ -0.7
C9orf3-214ENST00000473778 EMX1Q04741 257 aaPredicted RBP10.66□□□□□ -0.7
C9orf3-214ENST00000473778 VAC14Q08AM6 782 aa10.66□□□□□ -0.7
C9orf3-214ENST00000473778 TUBA3CQ13748 450 aa10.66□□□□□ -0.7
C9orf3-214ENST00000473778 CACHD1Q5VU97 1274 aa10.66□□□□□ -0.7
C9orf3-214ENST00000473778 CPZQ66K79 652 aa10.66□□□□□ -0.7
C9orf3-214ENST00000473778 MACC1Q6ZN28 852 aa10.66□□□□□ -0.7
C9orf3-214ENST00000473778 IGFN1Q86VF2 1251 aa10.66□□□□□ -0.7
C9orf3-214ENST00000473778 VRK3Q8IV63 474 aa10.66□□□□□ -0.7
C9orf3-214ENST00000473778 PARP8Q8N3A8 854 aa10.66□□□□□ -0.7
C9orf3-214ENST00000473778 ZCCHC7Q8N3Z6 543 aaKnown RBP10.66□□□□□ -0.7
C9orf3-214ENST00000473778 SVOPLQ8N434 492 aa10.66□□□□□ -0.7
C9orf3-214ENST00000473778 AADATQ8N5Z0 425 aa10.66□□□□□ -0.7
C9orf3-214ENST00000473778 SCAIQ8N9R8 606 aa10.66□□□□□ -0.7
C9orf3-214ENST00000473778 GLB1L3Q8NCI6 653 aaPredicted RBP10.66□□□□□ -0.7
C9orf3-214ENST00000473778 ABHD11Q8NFV4 315 aa10.66□□□□□ -0.7
C9orf3-214ENST00000473778 FBLIM1Q8WUP2 373 aa10.66□□□□□ -0.7
C9orf3-214ENST00000473778 APIPQ96GX9 242 aa10.66□□□□□ -0.7
C9orf3-214ENST00000473778 COX4I2Q96KJ9 171 aa10.66□□□□□ -0.7
C9orf3-214ENST00000473778 ELAC1Q9H777 363 aaKnown RBP10.66□□□□□ -0.7
C9orf3-214ENST00000473778 TRPM5Q9NZQ8 1165 aa10.66□□□□□ -0.7
C9orf3-214ENST00000473778 DOCK6Q96HP0 2047 aa10.66□□□□□ -0.7
C9orf3-214ENST00000473778 KCNE1BA0A087WTH5 132 aa10.66□□□□□ -0.7
C9orf3-214ENST00000473778 FAM220BPB1ANY3 271 aa10.66□□□□□ -0.7
C9orf3-214ENST00000473778 NRG2O14511 850 aaPredicted RBP10.66□□□□□ -0.7
C9orf3-214ENST00000473778 PER2O15055 1255 aa10.66□□□□□ -0.7
C9orf3-214ENST00000473778 STK16O75716 305 aa10.66□□□□□ -0.7
C9orf3-214ENST00000473778 SULT1C4O75897 302 aa10.66□□□□□ -0.7
C9orf3-214ENST00000473778 SDC1P18827 310 aa10.66□□□□□ -0.7
C9orf3-214ENST00000473778 FMO3P31513 532 aa10.66□□□□□ -0.7
C9orf3-214ENST00000473778 RXRGP48443 463 aa10.66□□□□□ -0.7
C9orf3-214ENST00000473778 RAB15P59190 212 aa10.66□□□□□ -0.7
C9orf3-214ENST00000473778 CDK5R2Q13319 367 aa10.66□□□□□ -0.7
C9orf3-214ENST00000473778 GBX1Q14549 363 aa10.66□□□□□ -0.7
C9orf3-214ENST00000473778 SMN1Q16637 294 aaKnown RBP10.66□□□□□ -0.7
C9orf3-214ENST00000473778 LRRC73Q5JTD7 316 aa10.66□□□□□ -0.7
C9orf3-214ENST00000473778 DGKKQ5KSL6 1271 aa10.66□□□□□ -0.7
C9orf3-214ENST00000473778 NEK5Q6P3R8 708 aa10.66□□□□□ -0.7
C9orf3-214ENST00000473778 CRTC3Q6UUV7 619 aa10.66□□□□□ -0.7
C9orf3-214ENST00000473778 RNF165Q6ZSG1 346 aa10.66□□□□□ -0.7
C9orf3-214ENST00000473778 NXPE1Q8N323 547 aa10.66□□□□□ -0.7
C9orf3-214ENST00000473778 SLC43A3Q8NBI5 491 aa10.66□□□□□ -0.7
C9orf3-214ENST00000473778 ZNF555Q8NEP9 628 aa10.66□□□□□ -0.7
C9orf3-214ENST00000473778 OR5K1Q8NHB7 308 aa10.66□□□□□ -0.7
C9orf3-214ENST00000473778 FAR1Q8WVX9 515 aa10.66□□□□□ -0.7
C9orf3-214ENST00000473778 ULK4Q96C45 1275 aa10.66□□□□□ -0.7
C9orf3-214ENST00000473778 BEGAINQ9BUH8 593 aa10.66□□□□□ -0.7
C9orf3-214ENST00000473778 ASIC5Q9NY37 505 aa10.66□□□□□ -0.7
C9orf3-214ENST00000473778 WARS2Q9UGM6 360 aaKnown RBP10.66□□□□□ -0.7
C9orf3-214ENST00000473778 AFF4Q9UHB7 1163 aaKnown RBP10.66□□□□□ -0.7
C9orf3-214ENST00000473778 CRLS1Q9UJA2 301 aa10.66□□□□□ -0.7
C9orf3-214ENST00000473778 ENPP5Q9UJA9 477 aa10.66□□□□□ -0.7
C9orf3-214ENST00000473778 BAG5Q9UL15 447 aa10.66□□□□□ -0.7
C9orf3-214ENST00000473778 FUOMA2VDF0 154 aa10.65□□□□□ -0.7
C9orf3-214ENST00000473778 TOR1BO14657 336 aa10.65□□□□□ -0.7
C9orf3-214ENST00000473778 COL6A1P12109 1028 aa10.65□□□□□ -0.7
C9orf3-214ENST00000473778 ITGALP20701 1170 aa10.65□□□□□ -0.7
C9orf3-214ENST00000473778 ACVR2AP27037 513 aa10.65□□□□□ -0.7
C9orf3-214ENST00000473778 CA8P35219 290 aa10.65□□□□□ -0.7
C9orf3-214ENST00000473778 MAGEA2P43356 314 aa10.65□□□□□ -0.7
C9orf3-214ENST00000473778 MAP2K4P45985 399 aa10.65□□□□□ -0.7
C9orf3-214ENST00000473778 RPIAP49247 311 aa10.65□□□□□ -0.7
C9orf3-214ENST00000473778 TUFMP49411 452 aaKnown RBP10.65□□□□□ -0.7
C9orf3-214ENST00000473778 DAPP51397 102 aa10.65□□□□□ -0.7
C9orf3-214ENST00000473778 TPD52P55327 224 aaPredicted RBP10.65□□□□□ -0.7
C9orf3-214ENST00000473778 CLDN8P56748 225 aa10.65□□□□□ -0.7
C9orf3-214ENST00000473778 GABARAPL2P60520 117 aa10.65□□□□□ -0.7
C9orf3-214ENST00000473778 CD300CQ08708 224 aa10.65□□□□□ -0.7
C9orf3-214ENST00000473778 CDH18Q13634 790 aa10.65□□□□□ -0.7
C9orf3-214ENST00000473778 SIM2Q14190 667 aaPredicted RBP10.65□□□□□ -0.7
C9orf3-214ENST00000473778 NR1D2Q14995 579 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms