RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 CTSBP07858 339 aa12.67□□□□□ -0.38
TPM3-216ENST00000473036 JMJD7P0C870 316 aa12.67□□□□□ -0.38
TPM3-216ENST00000473036 EBLN1P0CF75 366 aa12.67□□□□□ -0.38
TPM3-216ENST00000473036 ERGP11308 486 aa12.67□□□□□ -0.38
TPM3-216ENST00000473036 UGT2B7P16662 529 aa12.67□□□□□ -0.38
TPM3-216ENST00000473036 NELFEP18615 380 aaKnown RBP12.67□□□□□ -0.38
TPM3-216ENST00000473036 CSTF2P33240 577 aaKnown RBP eCLIP12.67□□□□□ -0.38
TPM3-216ENST00000473036 SHMT2P34897 504 aa12.67□□□□□ -0.38
TPM3-216ENST00000473036 TSPAN7P41732 249 aa12.67□□□□□ -0.38
TPM3-216ENST00000473036 PMS2P54278 862 aa12.67□□□□□ -0.38
TPM3-216ENST00000473036 FAM45BPQ6NSW5 357 aa12.67□□□□□ -0.38
TPM3-216ENST00000473036 SPESP1Q6UW49 350 aa12.67□□□□□ -0.38
TPM3-216ENST00000473036 TAX1BP1Q86VP1 789 aa12.67□□□□□ -0.38
TPM3-216ENST00000473036 FAM129CQ86XR2 697 aa12.67□□□□□ -0.38
TPM3-216ENST00000473036 LRRC56Q8IYG6 542 aaPredicted RBP12.67□□□□□ -0.38
TPM3-216ENST00000473036 FAM45AQ8TCE6 357 aa12.67□□□□□ -0.38
TPM3-216ENST00000473036 ANKRD49Q8WVL7 239 aa12.67□□□□□ -0.38
TPM3-216ENST00000473036 VPS39Q96JC1 886 aa12.67□□□□□ -0.38
TPM3-216ENST00000473036 PKP4Q99569 1192 aa12.67□□□□□ -0.38
TPM3-216ENST00000473036 RBBP8Q99708 897 aa12.67□□□□□ -0.38
TPM3-216ENST00000473036 FUT8Q9BYC5 575 aa12.67□□□□□ -0.38
TPM3-216ENST00000473036 TXLNGYQ9BZA5 131 aa12.67□□□□□ -0.38
TPM3-216ENST00000473036 EPB41L4BQ9H329 900 aa12.67□□□□□ -0.38
TPM3-216ENST00000473036 PPCSQ9HAB8 311 aa12.67□□□□□ -0.38
TPM3-216ENST00000473036 FAM60AQ9NP50 221 aa12.67□□□□□ -0.38
TPM3-216ENST00000473036 TAS2R13Q9NYV9 303 aa12.67□□□□□ -0.38
TPM3-216ENST00000473036 OR6C2Q9NZP2 312 aa12.67□□□□□ -0.38
TPM3-216ENST00000473036 TRMT6Q9UJA5 497 aaKnown RBP12.67□□□□□ -0.38
TPM3-216ENST00000473036 KLHL20Q9Y2M5 609 aa12.67□□□□□ -0.38
TPM3-216ENST00000473036 PCDHGA7Q9Y5G6 932 aa12.67□□□□□ -0.38
TPM3-216ENST00000473036 UQCRHLA0A096LP55 91 aa12.66□□□□□ -0.38
TPM3-216ENST00000473036 PIPSLA2A3N6 862 aa12.66□□□□□ -0.38
TPM3-216ENST00000473036 K7ENP7 123 aa12.66□□□□□ -0.38
TPM3-216ENST00000473036 NVLO15381 856 aaKnown RBP12.66□□□□□ -0.38
TPM3-216ENST00000473036 NRP2O60462 931 aa12.66□□□□□ -0.38
TPM3-216ENST00000473036 WISP1O95388 367 aa12.66□□□□□ -0.38
TPM3-216ENST00000473036 TIAF1O95411 115 aa12.66□□□□□ -0.38
TPM3-216ENST00000473036 UQCRHP07919 91 aa12.66□□□□□ -0.38
TPM3-216ENST00000473036 CBSLP0DN79 551 aa12.66□□□□□ -0.38
TPM3-216ENST00000473036 ZNF28P17035 718 aa12.66□□□□□ -0.38
TPM3-216ENST00000473036 SAT1P21673 171 aa12.66□□□□□ -0.38
TPM3-216ENST00000473036 PSMB5P28074 263 aa12.66□□□□□ -0.38
TPM3-216ENST00000473036 RBMS1P29558 406 aaKnown RBP12.66□□□□□ -0.38
TPM3-216ENST00000473036 CBSP35520 551 aa12.66□□□□□ -0.38
TPM3-216ENST00000473036 SRSF6Q13247 344 aaKnown RBP12.66□□□□□ -0.38
TPM3-216ENST00000473036 TGIF1Q15583 401 aa12.66□□□□□ -0.38
TPM3-216ENST00000473036 CYP2A13Q16696 494 aa12.66□□□□□ -0.38
TPM3-216ENST00000473036 PHKG1Q16816 387 aa12.66□□□□□ -0.38
TPM3-216ENST00000473036 TTLL9Q3SXZ7 439 aa12.66□□□□□ -0.38
TPM3-216ENST00000473036 ARHGAP40Q5TG30 622 aa12.66□□□□□ -0.38
TPM3-216ENST00000473036 KLHL35Q6PF15 583 aa12.66□□□□□ -0.38
TPM3-216ENST00000473036 INO80CQ6PI98 192 aaPredicted RBP12.66□□□□□ -0.38
TPM3-216ENST00000473036 MBOAT1Q6ZNC8 495 aa12.66□□□□□ -0.38
TPM3-216ENST00000473036 CROCCP2Q86T23 111 aa12.66□□□□□ -0.38
TPM3-216ENST00000473036 ZFAND4Q86XD8 727 aa12.66□□□□□ -0.38
TPM3-216ENST00000473036 D2HGDHQ8N465 521 aa12.66□□□□□ -0.38
TPM3-216ENST00000473036 MREGQ8N565 214 aa12.66□□□□□ -0.38
TPM3-216ENST00000473036 PPM1NQ8N819 430 aa12.66□□□□□ -0.38
TPM3-216ENST00000473036 OR9A1PQ8NGU1 263 aa12.66□□□□□ -0.38
TPM3-216ENST00000473036 OR2L8Q8NGY9 312 aa12.66□□□□□ -0.38
TPM3-216ENST00000473036 AENQ8WTP8 325 aaKnown RBP12.66□□□□□ -0.38
TPM3-216ENST00000473036 RAD51AP1Q96B01 352 aa12.66□□□□□ -0.38
TPM3-216ENST00000473036 LINGO1Q96FE5 620 aa12.66□□□□□ -0.38
TPM3-216ENST00000473036 ELMO2Q96JJ3 720 aa12.66□□□□□ -0.38
TPM3-216ENST00000473036 TRAPPC9Q96Q05 1148 aa12.66□□□□□ -0.38
TPM3-216ENST00000473036 CD180Q99467 661 aa12.66□□□□□ -0.38
TPM3-216ENST00000473036 CPNE5Q9HCH3 593 aa12.66□□□□□ -0.38
TPM3-216ENST00000473036 FBXO8Q9NRD0 319 aa12.66□□□□□ -0.38
TPM3-216ENST00000473036 SLC39A1Q9NY26 324 aa12.66□□□□□ -0.38
TPM3-216ENST00000473036 CORO1CQ9ULV4 474 aaPredicted RBP12.66□□□□□ -0.38
TPM3-216ENST00000473036 PCDHGA3Q9Y5H0 932 aa12.66□□□□□ -0.38
TPM3-216ENST00000473036 PIEZO2Q9H5I5 2752 aa12.66□□□□□ -0.38
TPM3-216ENST00000473036 FER1L5A0AVI2 2057 aa12.66□□□□□ -0.38
TPM3-216ENST00000473036 SEC16AO15027 2179 aa12.66□□□□□ -0.38
TPM3-216ENST00000473036 EIF3FO00303 357 aaPredicted RBP12.65□□□□□ -0.38
TPM3-216ENST00000473036 DYNC1I1O14576 645 aa12.65□□□□□ -0.38
TPM3-216ENST00000473036 KLK10O43240 276 aa12.65□□□□□ -0.38
TPM3-216ENST00000473036 ACSL3O95573 720 aa12.65□□□□□ -0.38
TPM3-216ENST00000473036 ENO3P13929 434 aaPredicted RBP12.65□□□□□ -0.38
TPM3-216ENST00000473036 ZNF37AP17032 561 aaPredicted RBP12.65□□□□□ -0.38
TPM3-216ENST00000473036 STX2P32856 288 aa12.65□□□□□ -0.38
TPM3-216ENST00000473036 GP5P40197 560 aa12.65□□□□□ -0.38
TPM3-216ENST00000473036 SKIV2L2P42285 1042 aaKnown RBP12.65□□□□□ -0.38
TPM3-216ENST00000473036 GABRA4P48169 554 aa12.65□□□□□ -0.38
TPM3-216ENST00000473036 CSRP3P50461 194 aa12.65□□□□□ -0.38
TPM3-216ENST00000473036 KIAA1614Q5VZ46 1190 aa12.65□□□□□ -0.38
TPM3-216ENST00000473036 UBE2R2Q712K3 238 aaPredicted RBP12.65□□□□□ -0.38
TPM3-216ENST00000473036 TIPARPQ7Z3E1 657 aaKnown RBP12.65□□□□□ -0.38
TPM3-216ENST00000473036 CTAGE3PQ8IX95 158 aa12.65□□□□□ -0.38
TPM3-216ENST00000473036 FBXO15Q8NCQ5 510 aaPredicted RBP12.65□□□□□ -0.38
TPM3-216ENST00000473036 PPFIBP2Q8ND30 876 aa12.65□□□□□ -0.38
TPM3-216ENST00000473036 HMGCLL1Q8TB92 370 aa12.65□□□□□ -0.38
TPM3-216ENST00000473036 ZNF480Q8WV37 535 aa12.65□□□□□ -0.38
TPM3-216ENST00000473036 CDKL2Q92772 493 aa12.65□□□□□ -0.38
TPM3-216ENST00000473036 NAF1Q96HR8 494 aaKnown RBP12.65□□□□□ -0.38
TPM3-216ENST00000473036 OR6C1Q96RD1 312 aa12.65□□□□□ -0.38
TPM3-216ENST00000473036 TAAR9Q96RI9 348 aa12.65□□□□□ -0.38
TPM3-216ENST00000473036 GPR22Q99680 433 aa12.65□□□□□ -0.38
TPM3-216ENST00000473036 CPNE1Q99829 537 aa12.65□□□□□ -0.38
TPM3-216ENST00000473036 SYNPO2LQ9H987 977 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms