RNA–Protein interactions for RNA: ENST00000471727.3

APLF-204, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 1 (best)

Gene APLF, Length 1,633 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-204ENST00000471727 FGBP02675 491 aa10.35□□□□□ -0.75
APLF-204ENST00000471727 CATP04040 527 aaKnown RBP10.35□□□□□ -0.75
APLF-204ENST00000471727 RHOP08100 348 aa10.35□□□□□ -0.75
APLF-204ENST00000471727 TIMP2P16035 220 aa10.35□□□□□ -0.75
APLF-204ENST00000471727 AMD1P17707 334 aa10.35□□□□□ -0.75
APLF-204ENST00000471727 BMPR1AP36894 532 aa10.35□□□□□ -0.75
APLF-204ENST00000471727 ARSFP54793 590 aa10.35□□□□□ -0.75
APLF-204ENST00000471727 ADARB1P78563 741 aaKnown RBP10.35□□□□□ -0.75
APLF-204ENST00000471727 LRRC74AQ0VAA2 488 aa10.35□□□□□ -0.75
APLF-204ENST00000471727 SELPLGQ14242 412 aa10.35□□□□□ -0.75
APLF-204ENST00000471727 LRRC26Q2I0M4 334 aa10.35□□□□□ -0.75
APLF-204ENST00000471727 RFX4Q33E94 735 aa10.35□□□□□ -0.75
APLF-204ENST00000471727 CYBRD1Q53TN4 286 aa10.35□□□□□ -0.75
APLF-204ENST00000471727 LY6G5CQ5SRR4 150 aa10.35□□□□□ -0.75
APLF-204ENST00000471727 HENMT1Q5T8I9 393 aaKnown RBP10.35□□□□□ -0.75
APLF-204ENST00000471727 ERICH5Q6P6B1 374 aa10.35□□□□□ -0.75
APLF-204ENST00000471727 GPR149Q86SP6 731 aa10.35□□□□□ -0.75
APLF-204ENST00000471727 ZNF786Q8N393 782 aa10.35□□□□□ -0.75
APLF-204ENST00000471727 FBXO15Q8NCQ5 510 aaPredicted RBP10.35□□□□□ -0.75
APLF-204ENST00000471727 OR10A6Q8NH74 314 aa10.35□□□□□ -0.75
APLF-204ENST00000471727 MAGEE2Q8TD90 523 aaPredicted RBP10.35□□□□□ -0.75
APLF-204ENST00000471727 FRS2Q8WU20 508 aa10.35□□□□□ -0.75
APLF-204ENST00000471727 FIG4Q92562 907 aa10.35□□□□□ -0.75
APLF-204ENST00000471727 FAM162AQ96A26 154 aa10.35□□□□□ -0.75
APLF-204ENST00000471727 TMEM159Q96B96 161 aa10.35□□□□□ -0.75
APLF-204ENST00000471727 TRIM43Q96BQ3 446 aaPredicted RBP10.35□□□□□ -0.75
APLF-204ENST00000471727 NMD3Q96D46 503 aaKnown RBP10.35□□□□□ -0.75
APLF-204ENST00000471727 FAM120BQ96EK7 910 aaKnown RBP10.35□□□□□ -0.75
APLF-204ENST00000471727 HHIPQ96QV1 700 aa10.35□□□□□ -0.75
APLF-204ENST00000471727 TRIM8Q9BZR9 551 aa10.35□□□□□ -0.75
APLF-204ENST00000471727 SMG9Q9H0W8 520 aaKnown RBP10.35□□□□□ -0.75
APLF-204ENST00000471727 BRF2Q9HAW0 419 aa10.35□□□□□ -0.75
APLF-204ENST00000471727 DCAF13Q9NV06 445 aaKnown RBP10.35□□□□□ -0.75
APLF-204ENST00000471727 USE1Q9NZ43 259 aa10.35□□□□□ -0.75
APLF-204ENST00000471727 CCL26Q9Y258 94 aa10.35□□□□□ -0.75
APLF-204ENST00000471727 RUVBL1Q9Y265 456 aaKnown RBP10.35□□□□□ -0.75
APLF-204ENST00000471727 NEUROG3Q9Y4Z2 214 aa10.35□□□□□ -0.75
APLF-204ENST00000471727 CEPT1Q9Y6K0 416 aa10.35□□□□□ -0.75
APLF-204ENST00000471727 ZBBXA8MT70 800 aa10.34□□□□□ -0.75
APLF-204ENST00000471727 H0Y858 1186 aa10.34□□□□□ -0.75
APLF-204ENST00000471727 PLOD2O00469 737 aa10.34□□□□□ -0.75
APLF-204ENST00000471727 CLGNO14967 610 aa10.34□□□□□ -0.75
APLF-204ENST00000471727 LEFTY1O75610 366 aa10.34□□□□□ -0.75
APLF-204ENST00000471727 CDH2P19022 906 aaPredicted RBP10.34□□□□□ -0.75
APLF-204ENST00000471727 WEE1P30291 646 aa10.34□□□□□ -0.75
APLF-204ENST00000471727 HALP42357 657 aa10.34□□□□□ -0.75
APLF-204ENST00000471727 GJA8P48165 433 aa10.34□□□□□ -0.75
APLF-204ENST00000471727 RPS6KA3P51812 740 aa10.34□□□□□ -0.75
APLF-204ENST00000471727 ST8SIA6P61647 398 aa10.34□□□□□ -0.75
APLF-204ENST00000471727 IRF8Q02556 426 aa10.34□□□□□ -0.75
APLF-204ENST00000471727 MTAPQ13126 283 aa10.34□□□□□ -0.75
APLF-204ENST00000471727 CHIT1Q13231 466 aa10.34□□□□□ -0.75
APLF-204ENST00000471727 PPIGQ13427 754 aaKnown RBP eCLIP10.34□□□□□ -0.75
APLF-204ENST00000471727 ZBED5Q49AG3 693 aa10.34□□□□□ -0.75
APLF-204ENST00000471727 SYTL3Q4VX76 610 aa10.34□□□□□ -0.75
APLF-204ENST00000471727 ARSIQ5FYB1 569 aa10.34□□□□□ -0.75
APLF-204ENST00000471727 CCNYL2Q5T2Q4 361 aa10.34□□□□□ -0.75
APLF-204ENST00000471727 NEK5Q6P3R8 708 aa10.34□□□□□ -0.75
APLF-204ENST00000471727 MBOAT1Q6ZNC8 495 aa10.34□□□□□ -0.75
APLF-204ENST00000471727 RFLNAQ6ZTI6 216 aa10.34□□□□□ -0.75
APLF-204ENST00000471727 HSD11B1LQ7Z5J1 315 aa10.34□□□□□ -0.75
APLF-204ENST00000471727 GPR141Q7Z602 305 aa10.34□□□□□ -0.75
APLF-204ENST00000471727 TECPR1Q7Z6L1 1165 aa10.34□□□□□ -0.75
APLF-204ENST00000471727 PGBD3Q8N328 593 aa10.34□□□□□ -0.75
APLF-204ENST00000471727 FAM110BQ8TC76 370 aa10.34□□□□□ -0.75
APLF-204ENST00000471727 SP7Q8TDD2 431 aaPredicted RBP10.34□□□□□ -0.75
APLF-204ENST00000471727 NELL1Q92832 810 aa10.34□□□□□ -0.75
APLF-204ENST00000471727 GLYATL1Q969I3 302 aa10.34□□□□□ -0.75
APLF-204ENST00000471727 GFM2Q969S9 779 aaKnown RBP10.34□□□□□ -0.75
APLF-204ENST00000471727 TBC1D20Q96BZ9 403 aa10.34□□□□□ -0.75
APLF-204ENST00000471727 SLC47A1Q96FL8 570 aa10.34□□□□□ -0.75
APLF-204ENST00000471727 REXO5Q96IC2 774 aaKnown RBP10.34□□□□□ -0.75
APLF-204ENST00000471727 MPP4Q96JB8 637 aa10.34□□□□□ -0.75
APLF-204ENST00000471727 CNDP2Q96KP4 475 aaKnown RBP10.34□□□□□ -0.75
APLF-204ENST00000471727 MRGPRX3Q96LB0 322 aa10.34□□□□□ -0.75
APLF-204ENST00000471727 RAD9AQ99638 391 aa10.34□□□□□ -0.75
APLF-204ENST00000471727 P2RY13Q9BPV8 354 aa10.34□□□□□ -0.75
APLF-204ENST00000471727 RBM4BQ9BQ04 359 aaKnown RBP10.34□□□□□ -0.75
APLF-204ENST00000471727 CPPED1Q9BRF8 314 aaPredicted RBP10.34□□□□□ -0.75
APLF-204ENST00000471727 CCM2Q9BSQ5 444 aa10.34□□□□□ -0.75
APLF-204ENST00000471727 RBM4Q9BWF3 364 aaKnown RBP10.34□□□□□ -0.75
APLF-204ENST00000471727 SPATA9Q9BWV2 254 aa10.34□□□□□ -0.75
APLF-204ENST00000471727 PIF1Q9H611 641 aa10.34□□□□□ -0.75
APLF-204ENST00000471727 NTN4Q9HB63 628 aa10.34□□□□□ -0.75
APLF-204ENST00000471727 PCDH12Q9NPG4 1184 aa10.34□□□□□ -0.75
APLF-204ENST00000471727 TIMMDC1Q9NPL8 285 aa10.34□□□□□ -0.75
APLF-204ENST00000471727 DDX18Q9NVP1 670 aaKnown RBP10.34□□□□□ -0.75
APLF-204ENST00000471727 FAM120CQ9NX05 1096 aaKnown RBP10.34□□□□□ -0.75
APLF-204ENST00000471727 SLC25A37Q9NYZ2 338 aa10.34□□□□□ -0.75
APLF-204ENST00000471727 GPRC5BQ9NZH0 403 aa10.34□□□□□ -0.75
APLF-204ENST00000471727 LIMD1Q9UGP4 676 aa10.34□□□□□ -0.75
APLF-204ENST00000471727 SLC22A14Q9Y267 594 aa10.34□□□□□ -0.75
APLF-204ENST00000471727 PCDHB14Q9Y5E9 798 aa10.34□□□□□ -0.75
APLF-204ENST00000471727 PCDHGA11Q9Y5H2 935 aa10.34□□□□□ -0.75
APLF-204ENST00000471727 DENND4CQ5VZ89 1909 aa10.34□□□□□ -0.75
APLF-204ENST00000471727 G3V2T6 193 aa10.33□□□□□ -0.76
APLF-204ENST00000471727 H0YIV9 168 aa10.33□□□□□ -0.76
APLF-204ENST00000471727 UPK1AO00322 258 aa10.33□□□□□ -0.76
APLF-204ENST00000471727 GNGT2O14610 69 aa10.33□□□□□ -0.76
APLF-204ENST00000471727 CREG1O75629 220 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms