RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 GPR137BO60478 399 aa5.02□□□□□ -1.61
CCDC39-202ENST00000471307 LIFP15018 202 aa5.02□□□□□ -1.61
CCDC39-202ENST00000471307 ANXA7P20073 488 aaKnown RBP5.02□□□□□ -1.61
CCDC39-202ENST00000471307 ITGA3P26006 1051 aa5.02□□□□□ -1.61
CCDC39-202ENST00000471307 MSH2P43246 934 aa5.02□□□□□ -1.61
CCDC39-202ENST00000471307 NT5C2P49902 561 aa5.02□□□□□ -1.61
CCDC39-202ENST00000471307 PRELPP51888 382 aa5.02□□□□□ -1.61
CCDC39-202ENST00000471307 DYNLL1P63167 89 aaKnown RBP5.02□□□□□ -1.61
CCDC39-202ENST00000471307 SPOCK1Q08629 439 aa5.02□□□□□ -1.61
CCDC39-202ENST00000471307 KIAA1644Q3SXP7 199 aa5.02□□□□□ -1.61
CCDC39-202ENST00000471307 SBK1Q52WX2 424 aa5.02□□□□□ -1.61
CCDC39-202ENST00000471307 RARS2Q5T160 578 aaKnown RBP5.02□□□□□ -1.61
CCDC39-202ENST00000471307 FAAH2Q6GMR7 532 aa5.02□□□□□ -1.61
CCDC39-202ENST00000471307 JADE1Q6IE81 842 aa5.02□□□□□ -1.61
CCDC39-202ENST00000471307 APOBEC3HQ6NTF7 200 aaKnown RBP5.02□□□□□ -1.61
CCDC39-202ENST00000471307 FASTKD5Q7L8L6 764 aaKnown RBP5.02□□□□□ -1.61
CCDC39-202ENST00000471307 GALNT5Q7Z7M9 940 aa5.02□□□□□ -1.61
CCDC39-202ENST00000471307 GPC2Q8N158 579 aa5.02□□□□□ -1.61
CCDC39-202ENST00000471307 GSDMBQ8TAX9 411 aa5.02□□□□□ -1.61
CCDC39-202ENST00000471307 SENP5Q96HI0 755 aaPredicted RBP5.02□□□□□ -1.61
CCDC39-202ENST00000471307 MXD3Q9BW11 206 aa5.02□□□□□ -1.61
CCDC39-202ENST00000471307 NAPBQ9H115 298 aa5.02□□□□□ -1.61
CCDC39-202ENST00000471307 MUC13Q9H3R2 512 aa5.02□□□□□ -1.61
CCDC39-202ENST00000471307 AATFQ9NY61 560 aaKnown RBP eCLIP5.02□□□□□ -1.61
CCDC39-202ENST00000471307 RPS6KL1Q9Y6S9 549 aa5.02□□□□□ -1.61
CCDC39-202ENST00000471307 MAST2Q6P0Q8 1798 aa5.01□□□□□ -1.61
CCDC39-202ENST00000471307 ITIH6Q6UXX5 1313 aa5.01□□□□□ -1.61
CCDC39-202ENST00000471307 TMEM8BA6NDV4 472 aa5.01□□□□□ -1.61
CCDC39-202ENST00000471307 A6NL46 340 aa5.01□□□□□ -1.61
CCDC39-202ENST00000471307 DUXAA6NLW8 204 aa5.01□□□□□ -1.61
CCDC39-202ENST00000471307 H3BQ06 376 aaPredicted RBP5.01□□□□□ -1.61
CCDC39-202ENST00000471307 J3KRW8 73 aa5.01□□□□□ -1.61
CCDC39-202ENST00000471307 PLPP2O43688 288 aa5.01□□□□□ -1.61
CCDC39-202ENST00000471307 PRKAB2O43741 272 aa5.01□□□□□ -1.61
CCDC39-202ENST00000471307 CD48P09326 243 aa5.01□□□□□ -1.61
CCDC39-202ENST00000471307 PCP11498 1178 aaKnown RBP5.01□□□□□ -1.61
CCDC39-202ENST00000471307 ZNF26P17031 533 aaPredicted RBP5.01□□□□□ -1.61
CCDC39-202ENST00000471307 NFKBIAP25963 317 aa5.01□□□□□ -1.61
CCDC39-202ENST00000471307 ANP32AP39687 249 aaKnown RBP5.01□□□□□ -1.61
CCDC39-202ENST00000471307 TDO2P48775 406 aa5.01□□□□□ -1.61
CCDC39-202ENST00000471307 PRAMEP78395 509 aa5.01□□□□□ -1.61
CCDC39-202ENST00000471307 TRDNQ13061 729 aa5.01□□□□□ -1.61
CCDC39-202ENST00000471307 MFAP5Q13361 173 aa5.01□□□□□ -1.61
CCDC39-202ENST00000471307 SIM2Q14190 667 aaPredicted RBP5.01□□□□□ -1.61
CCDC39-202ENST00000471307 MED22Q15528 200 aa5.01□□□□□ -1.61
CCDC39-202ENST00000471307 FKBP1CQ5VVH2 108 aa5.01□□□□□ -1.61
CCDC39-202ENST00000471307 CDC42EP5Q6NZY7 148 aa5.01□□□□□ -1.61
CCDC39-202ENST00000471307 CTR9Q6PD62 1173 aa5.01□□□□□ -1.61
CCDC39-202ENST00000471307 ZNF497Q6ZNH5 498 aa5.01□□□□□ -1.61
CCDC39-202ENST00000471307 TEX11Q8IYF3 940 aa5.01□□□□□ -1.61
CCDC39-202ENST00000471307 OR2T12Q8NG77 320 aa5.01□□□□□ -1.61
CCDC39-202ENST00000471307 KCNG4Q8TDN1 519 aa5.01□□□□□ -1.61
CCDC39-202ENST00000471307 SDR42E1Q8WUS8 393 aa5.01□□□□□ -1.61
CCDC39-202ENST00000471307 ZBED3Q96IU2 234 aaPredicted RBP5.01□□□□□ -1.61
CCDC39-202ENST00000471307 DACH2Q96NX9 599 aa5.01□□□□□ -1.61
CCDC39-202ENST00000471307 C1QTNF1Q9BXJ1 281 aa5.01□□□□□ -1.61
CCDC39-202ENST00000471307 IDI2Q9BXS1 227 aa5.01□□□□□ -1.61
CCDC39-202ENST00000471307 ALDH8A1Q9H2A2 487 aaPredicted RBP5.01□□□□□ -1.61
CCDC39-202ENST00000471307 RNF41Q9H4P4 317 aaPredicted RBP5.01□□□□□ -1.61
CCDC39-202ENST00000471307 COQ3Q9NZJ6 369 aa5.01□□□□□ -1.61
CCDC39-202ENST00000471307 ZNF646O15015 1829 aaPredicted RBP5.01□□□□□ -1.61
CCDC39-202ENST00000471307 COL4A5P29400 1685 aa5.01□□□□□ -1.61
CCDC39-202ENST00000471307 COL2A1P02458 1487 aaPredicted RBP5□□□□□ -1.61
CCDC39-202ENST00000471307 E7EWF7 191 aa5□□□□□ -1.61
CCDC39-202ENST00000471307 J3QR06 171 aa5□□□□□ -1.61
CCDC39-202ENST00000471307 SYNCRIPO60506 623 aaKnown RBP5□□□□□ -1.61
CCDC39-202ENST00000471307 ENTPD3O75355 529 aa5□□□□□ -1.61
CCDC39-202ENST00000471307 RNASEH2AO75792 299 aaKnown RBP5□□□□□ -1.61
CCDC39-202ENST00000471307 TBX6O95947 436 aaPredicted RBP5□□□□□ -1.61
CCDC39-202ENST00000471307 CLPTM1O96005 669 aa5□□□□□ -1.61
CCDC39-202ENST00000471307 TNFAIP3P21580 790 aa5□□□□□ -1.61
CCDC39-202ENST00000471307 CHMP24386 653 aa5□□□□□ -1.61
CCDC39-202ENST00000471307 GMPSP49915 693 aaPredicted RBP5□□□□□ -1.61
CCDC39-202ENST00000471307 LUMP51884 338 aaPredicted RBP5□□□□□ -1.61
CCDC39-202ENST00000471307 MEP1AQ16819 746 aa5□□□□□ -1.61
CCDC39-202ENST00000471307 ZSCAN23Q3MJ62 389 aa5□□□□□ -1.61
CCDC39-202ENST00000471307 C12orf60Q5U649 245 aa5□□□□□ -1.61
CCDC39-202ENST00000471307 MFSD6Q6ZSS7 791 aa5□□□□□ -1.61
CCDC39-202ENST00000471307 RUFY3Q7L099 469 aa5□□□□□ -1.61
CCDC39-202ENST00000471307 CEP97Q8IW35 865 aa5□□□□□ -1.61
CCDC39-202ENST00000471307 GPATCH11Q8N954 259 aa5□□□□□ -1.61
CCDC39-202ENST00000471307 MAPK1IP1LQ8NDC0 245 aa5□□□□□ -1.61
CCDC39-202ENST00000471307 NCOA7Q8NI08 942 aa5□□□□□ -1.61
CCDC39-202ENST00000471307 SNX21Q969T3 373 aa5□□□□□ -1.61
CCDC39-202ENST00000471307 JAKMIP1Q96N16 626 aaKnown RBP5□□□□□ -1.61
CCDC39-202ENST00000471307 NEK1Q96PY6 1258 aa5□□□□□ -1.61
CCDC39-202ENST00000471307 OR2A14Q96R47 310 aa5□□□□□ -1.61
CCDC39-202ENST00000471307 KRT23Q9C075 422 aa5□□□□□ -1.61
CCDC39-202ENST00000471307 SH2D4AQ9H788 454 aa5□□□□□ -1.61
CCDC39-202ENST00000471307 ERVMER34-1Q9H9K5 563 aa5□□□□□ -1.61
CCDC39-202ENST00000471307 MYOZ2Q9NPC6 264 aa5□□□□□ -1.61
CCDC39-202ENST00000471307 ZDHHC18Q9NUE0 388 aa5□□□□□ -1.61
CCDC39-202ENST00000471307 IRAK4Q9NWZ3 460 aa5□□□□□ -1.61
CCDC39-202ENST00000471307 TMOD2Q9NZR1 351 aa5□□□□□ -1.61
CCDC39-202ENST00000471307 KCNJ14Q9UNX9 436 aa5□□□□□ -1.61
CCDC39-202ENST00000471307 B3GALT5Q9Y2C3 310 aa5□□□□□ -1.61
CCDC39-202ENST00000471307 PRSS21Q9Y6M0 314 aa5□□□□□ -1.61
CCDC39-202ENST00000471307 FLT1P17948 1338 aa4.99□□□□□ -1.61
CCDC39-202ENST00000471307 WDR19Q8NEZ3 1342 aa4.99□□□□□ -1.61
CCDC39-202ENST00000471307 ZNF541Q9H0D2 1346 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms