RNA–Protein interactions for RNA: ENST00000470363.5

HLA-C-206, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,279 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-206ENST00000470363 ITGA9Q13797 1035 aa11.21□□□□□ -0.61
HLA-C-206ENST00000470363 RASA2Q15283 850 aa11.21□□□□□ -0.61
HLA-C-206ENST00000470363 GPR33Q49SQ1 333 aa11.21□□□□□ -0.61
HLA-C-206ENST00000470363 ZNF658BQ4V348 819 aaPredicted RBP11.21□□□□□ -0.61
HLA-C-206ENST00000470363 TNFAIP8L3Q5GJ75 292 aa11.21□□□□□ -0.61
HLA-C-206ENST00000470363 AGBL2Q5U5Z8 902 aa11.21□□□□□ -0.61
HLA-C-206ENST00000470363 PWWP2BQ6NUJ5 590 aa11.21□□□□□ -0.61
HLA-C-206ENST00000470363 CLEC18BQ6UXF7 455 aa11.21□□□□□ -0.61
HLA-C-206ENST00000470363 CERS6Q6ZMG9 384 aa11.21□□□□□ -0.61
HLA-C-206ENST00000470363 ZNF517Q6ZMY9 492 aaPredicted RBP11.21□□□□□ -0.61
HLA-C-206ENST00000470363 FAM92BQ6ZTR7 304 aa11.21□□□□□ -0.61
HLA-C-206ENST00000470363 KIAA0408Q6ZU52 694 aa11.21□□□□□ -0.61
HLA-C-206ENST00000470363 CMC1Q7Z7K0 106 aa11.21□□□□□ -0.61
HLA-C-206ENST00000470363 LMNTD2Q8IXW0 634 aa11.21□□□□□ -0.61
HLA-C-206ENST00000470363 BEND7Q8N7W2 519 aaPredicted RBP11.21□□□□□ -0.61
HLA-C-206ENST00000470363 CLEC18CQ8NCF0 446 aa11.21□□□□□ -0.61
HLA-C-206ENST00000470363 GABPB2Q8TAK5 448 aaPredicted RBP11.21□□□□□ -0.61
HLA-C-206ENST00000470363 C9orf43Q8TAL5 461 aaPredicted RBP11.21□□□□□ -0.61
HLA-C-206ENST00000470363 GDAP1Q8TB36 358 aa11.21□□□□□ -0.61
HLA-C-206ENST00000470363 ZFPM2Q8WW38 1151 aa11.21□□□□□ -0.61
HLA-C-206ENST00000470363 LPGAT1Q92604 370 aa11.21□□□□□ -0.61
HLA-C-206ENST00000470363 FAM136AQ96C01 138 aa11.21□□□□□ -0.61
HLA-C-206ENST00000470363 RNF31Q96EP0 1072 aa11.21□□□□□ -0.61
HLA-C-206ENST00000470363 PGM2Q96G03 612 aa11.21□□□□□ -0.61
HLA-C-206ENST00000470363 ELMO2Q96JJ3 720 aa11.21□□□□□ -0.61
HLA-C-206ENST00000470363 ATP6V1G3Q96LB4 118 aa11.21□□□□□ -0.61
HLA-C-206ENST00000470363 LINC00615Q96LM1 132 aaPredicted RBP11.21□□□□□ -0.61
HLA-C-206ENST00000470363 FCRL4Q96PJ5 515 aa11.21□□□□□ -0.61
HLA-C-206ENST00000470363 INSM2Q96T92 566 aaPredicted RBP11.21□□□□□ -0.61
HLA-C-206ENST00000470363 LHX9Q9NQ69 397 aa11.21□□□□□ -0.61
HLA-C-206ENST00000470363 ZNF71Q9NQZ8 489 aaPredicted RBP11.21□□□□□ -0.61
HLA-C-206ENST00000470363 ANAPC2Q9UJX6 822 aa11.21□□□□□ -0.61
HLA-C-206ENST00000470363 SLC39A10Q9ULF5 831 aa11.21□□□□□ -0.61
HLA-C-206ENST00000470363 PRSS21Q9Y6M0 314 aa11.21□□□□□ -0.61
HLA-C-206ENST00000470363 PTPN13Q12923 2485 aa11.2□□□□□ -0.62
HLA-C-206ENST00000470363 OR5K3A6NET4 321 aa11.2□□□□□ -0.62
HLA-C-206ENST00000470363 MGAT4DA6NG13 374 aa11.2□□□□□ -0.62
HLA-C-206ENST00000470363 OR2AG2A6NM03 316 aa11.2□□□□□ -0.62
HLA-C-206ENST00000470363 PHGDHO43175 533 aaKnown RBP11.2□□□□□ -0.62
HLA-C-206ENST00000470363 CREG1O75629 220 aa11.2□□□□□ -0.62
HLA-C-206ENST00000470363 RASSF9O75901 435 aa11.2□□□□□ -0.62
HLA-C-206ENST00000470363 MTHFD1P11586 935 aaKnown RBP11.2□□□□□ -0.62
HLA-C-206ENST00000470363 ACRV1P26436 265 aa11.2□□□□□ -0.62
HLA-C-206ENST00000470363 MAGOHP61326 146 aaKnown RBP11.2□□□□□ -0.62
HLA-C-206ENST00000470363 FOXK1P85037 733 aa11.2□□□□□ -0.62
HLA-C-206ENST00000470363 SRSF1Q07955 248 aaKnown RBP eCLIP11.2□□□□□ -0.62
HLA-C-206ENST00000470363 GTF2H3Q13889 308 aa11.2□□□□□ -0.62
HLA-C-206ENST00000470363 KCNAB1Q14722 419 aa11.2□□□□□ -0.62
HLA-C-206ENST00000470363 BCL7AQ4VC05 210 aa11.2□□□□□ -0.62
HLA-C-206ENST00000470363 HSP90B2PQ58FF3 399 aa11.2□□□□□ -0.62
HLA-C-206ENST00000470363 AARS2Q5JTZ9 985 aaKnown RBP11.2□□□□□ -0.62
HLA-C-206ENST00000470363 COLEC12Q5KU26 742 aa11.2□□□□□ -0.62
HLA-C-206ENST00000470363 LGSNQ5TDP6 509 aa11.2□□□□□ -0.62
HLA-C-206ENST00000470363 HECTD2Q5U5R9 776 aa11.2□□□□□ -0.62
HLA-C-206ENST00000470363 CAPRIN2Q6IMN6 1127 aaKnown RBP11.2□□□□□ -0.62
HLA-C-206ENST00000470363 IRGCQ6NXR0 463 aa11.2□□□□□ -0.62
HLA-C-206ENST00000470363 C16orf46Q6P387 395 aa11.2□□□□□ -0.62
HLA-C-206ENST00000470363 TAOK1Q7L7X3 1001 aa11.2□□□□□ -0.62
HLA-C-206ENST00000470363 GALNT7Q86SF2 657 aa11.2□□□□□ -0.62
HLA-C-206ENST00000470363 TRABD2AQ86V40 505 aa11.2□□□□□ -0.62
HLA-C-206ENST00000470363 EXOC3L1Q86VI1 746 aa11.2□□□□□ -0.62
HLA-C-206ENST00000470363 BPHLQ86WA6 291 aaPredicted RBP11.2□□□□□ -0.62
HLA-C-206ENST00000470363 PPP1R3BQ86XI6 285 aa11.2□□□□□ -0.62
HLA-C-206ENST00000470363 SRRM1Q8IYB3 904 aaKnown RBP11.2□□□□□ -0.62
HLA-C-206ENST00000470363 C4orf33Q8N1A6 199 aa11.2□□□□□ -0.62
HLA-C-206ENST00000470363 D2HGDHQ8N465 521 aa11.2□□□□□ -0.62
HLA-C-206ENST00000470363 CLDN19Q8N6F1 224 aa11.2□□□□□ -0.62
HLA-C-206ENST00000470363 SPDYE1Q8NFV5 336 aaPredicted RBP11.2□□□□□ -0.62
HLA-C-206ENST00000470363 OR2L2Q8NH16 312 aa11.2□□□□□ -0.62
HLA-C-206ENST00000470363 TLCD1Q96CP7 247 aa11.2□□□□□ -0.62
HLA-C-206ENST00000470363 ZNF514Q96K75 400 aaPredicted RBP11.2□□□□□ -0.62
HLA-C-206ENST00000470363 TCF12Q99081 682 aa11.2□□□□□ -0.62
HLA-C-206ENST00000470363 MAP3K3Q99759 626 aa11.2□□□□□ -0.62
HLA-C-206ENST00000470363 OLFM1Q99784 485 aa11.2□□□□□ -0.62
HLA-C-206ENST00000470363 INTS10Q9NVR2 710 aaKnown RBP11.2□□□□□ -0.62
HLA-C-206ENST00000470363 ZDHHC3Q9NYG2 299 aa11.2□□□□□ -0.62
HLA-C-206ENST00000470363 GALPQ9UBC7 116 aa11.2□□□□□ -0.62
HLA-C-206ENST00000470363 PADI1Q9ULC6 663 aa11.2□□□□□ -0.62
HLA-C-206ENST00000470363 PSMD13Q9UNM6 376 aa11.2□□□□□ -0.62
HLA-C-206ENST00000470363 NBASA2RRP1 2371 aa11.2□□□□□ -0.62
HLA-C-206ENST00000470363 IQCF5A8MTL0 148 aa11.19□□□□□ -0.62
HLA-C-206ENST00000470363 NIPSNAP2O75323 286 aa11.19□□□□□ -0.62
HLA-C-206ENST00000470363 SPAG7O75391 227 aa11.19□□□□□ -0.62
HLA-C-206ENST00000470363 RFPL1O75677 317 aa11.19□□□□□ -0.62
HLA-C-206ENST00000470363 ALDOAP04075 364 aaKnown RBP11.19□□□□□ -0.62
HLA-C-206ENST00000470363 PYGBP11216 843 aa11.19□□□□□ -0.62
HLA-C-206ENST00000470363 PKMP14618 531 aaKnown RBP11.19□□□□□ -0.62
HLA-C-206ENST00000470363 CNTFP26441 200 aa11.19□□□□□ -0.62
HLA-C-206ENST00000470363 HALP42357 657 aa11.19□□□□□ -0.62
HLA-C-206ENST00000470363 CDKN2DP55273 166 aa11.19□□□□□ -0.62
HLA-C-206ENST00000470363 TAS2R39P59534 338 aa11.19□□□□□ -0.62
HLA-C-206ENST00000470363 GPS2Q13227 327 aa11.19□□□□□ -0.62
HLA-C-206ENST00000470363 ERV3-1Q14264 604 aa11.19□□□□□ -0.62
HLA-C-206ENST00000470363 ZNF460Q14592 562 aa11.19□□□□□ -0.62
HLA-C-206ENST00000470363 USP10Q14694 798 aaKnown RBP11.19□□□□□ -0.62
HLA-C-206ENST00000470363 IGFBP7Q16270 282 aa11.19□□□□□ -0.62
HLA-C-206ENST00000470363 CTSL3PQ5NE16 218 aa11.19□□□□□ -0.62
HLA-C-206ENST00000470363 TCTN3Q6NUS6 607 aa11.19□□□□□ -0.62
HLA-C-206ENST00000470363 DET1Q7L5Y6 550 aa11.19□□□□□ -0.62
HLA-C-206ENST00000470363 KMT5CQ86Y97 462 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms