RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 PCBP4P57723 403 aaKnown RBP19.61■□□□□ 0.73
SKA3-205ENST00000465471 USP10Q14694 798 aaKnown RBP19.61■□□□□ 0.73
SKA3-205ENST00000465471 PHKG1Q16816 387 aa19.61■□□□□ 0.73
SKA3-205ENST00000465471 PPP1R3AQ16821 1122 aa19.61■□□□□ 0.73
SKA3-205ENST00000465471 SBSNQ6UWP8 590 aa19.61■□□□□ 0.73
SKA3-205ENST00000465471 C2orf73Q8N5S3 287 aaPredicted RBP19.61■□□□□ 0.73
SKA3-205ENST00000465471 ZPBPQ9BS86 351 aa19.61■□□□□ 0.73
SKA3-205ENST00000465471 ASPSCR1Q9BZE9 553 aa19.61■□□□□ 0.73
SKA3-205ENST00000465471 NOVA2Q9UNW9 492 aaKnown RBP19.61■□□□□ 0.73
SKA3-205ENST00000465471 LAMA5O15230 3695 aa19.61■□□□□ 0.73
SKA3-205ENST00000465471 ZZEF1O43149 2961 aa19.6■□□□□ 0.73
SKA3-205ENST00000465471 EPG5Q9HCE0 2579 aa19.6■□□□□ 0.73
SKA3-205ENST00000465471 A0A087WUV0 522 aaPredicted RBP19.6■□□□□ 0.73
SKA3-205ENST00000465471 IQCJ-SCHIP1C9J366 451 aaPredicted RBP19.6■□□□□ 0.73
SKA3-205ENST00000465471 E7ENX8 843 aa19.6■□□□□ 0.73
SKA3-205ENST00000465471 PHGDHO43175 533 aaKnown RBP19.6■□□□□ 0.73
SKA3-205ENST00000465471 RIPK2O43353 540 aa19.6■□□□□ 0.73
SKA3-205ENST00000465471 ENO2P09104 434 aaPredicted RBP19.6■□□□□ 0.73
SKA3-205ENST00000465471 EBLN1P0CF75 366 aa19.6■□□□□ 0.73
SKA3-205ENST00000465471 FGF5P12034 268 aa19.6■□□□□ 0.73
SKA3-205ENST00000465471 CD82P27701 267 aa19.6■□□□□ 0.73
SKA3-205ENST00000465471 PNLIPRP1P54315 467 aa19.6■□□□□ 0.73
SKA3-205ENST00000465471 SLC12A2P55011 1212 aa19.6■□□□□ 0.73
SKA3-205ENST00000465471 RAB10P61026 200 aa19.6■□□□□ 0.73
SKA3-205ENST00000465471 TAP2Q03519 686 aa19.6■□□□□ 0.73
SKA3-205ENST00000465471 IL11RAQ14626 422 aa19.6■□□□□ 0.73
SKA3-205ENST00000465471 KCNAB1Q14722 419 aa19.6■□□□□ 0.73
SKA3-205ENST00000465471 ZIC1Q15915 447 aa19.6■□□□□ 0.73
SKA3-205ENST00000465471 DCAF12Q5T6F0 453 aa19.6■□□□□ 0.73
SKA3-205ENST00000465471 TMEM164Q5U3C3 297 aa19.6■□□□□ 0.73
SKA3-205ENST00000465471 CEACAM20Q6UY09 585 aa19.6■□□□□ 0.73
SKA3-205ENST00000465471 TAX1BP1Q86VP1 789 aa19.6■□□□□ 0.73
SKA3-205ENST00000465471 C19orf47Q8N9M1 422 aaKnown RBP19.6■□□□□ 0.73
SKA3-205ENST00000465471 OR2A1Q8NGT9 310 aa19.6■□□□□ 0.73
SKA3-205ENST00000465471 MCOLN3Q8TDD5 553 aa19.6■□□□□ 0.73
SKA3-205ENST00000465471 SMPDL3AQ92484 453 aa19.6■□□□□ 0.73
SKA3-205ENST00000465471 UBXN10Q96LJ8 280 aa19.6■□□□□ 0.73
SKA3-205ENST00000465471 OR6C1Q96RD1 312 aa19.6■□□□□ 0.73
SKA3-205ENST00000465471 SPRY4Q9C004 299 aa19.6■□□□□ 0.73
SKA3-205ENST00000465471 DERL2Q9GZP9 239 aa19.6■□□□□ 0.73
SKA3-205ENST00000465471 CAMSAP3Q9P1Y5 1249 aaPredicted RBP19.6■□□□□ 0.73
SKA3-205ENST00000465471 ZMIZ1Q9ULJ6 1067 aa19.6■□□□□ 0.73
SKA3-205ENST00000465471 RAXQ9Y2V3 346 aa19.6■□□□□ 0.73
SKA3-205ENST00000465471 PCDHB11Q9Y5F2 797 aa19.6■□□□□ 0.73
SKA3-205ENST00000465471 KLK4Q9Y5K2 254 aa19.6■□□□□ 0.73
SKA3-205ENST00000465471 ZNF839A8K0R7 811 aa19.59■□□□□ 0.73
SKA3-205ENST00000465471 POLR1CO15160 346 aaPredicted RBP19.59■□□□□ 0.73
SKA3-205ENST00000465471 PSMB5P28074 263 aa19.59■□□□□ 0.73
SKA3-205ENST00000465471 EIF2S3P41091 472 aaKnown RBP19.59■□□□□ 0.73
SKA3-205ENST00000465471 AP1S2P56377 157 aa19.59■□□□□ 0.73
SKA3-205ENST00000465471 ACY1Q03154 408 aa19.59■□□□□ 0.73
SKA3-205ENST00000465471 TUBB3Q13509 450 aa19.59■□□□□ 0.73
SKA3-205ENST00000465471 CYB5D1Q6P9G0 228 aa19.59■□□□□ 0.73
SKA3-205ENST00000465471 ZNF501Q96CX3 271 aaPredicted RBP19.59■□□□□ 0.73
SKA3-205ENST00000465471 CCDC138Q96M89 665 aa19.59■□□□□ 0.73
SKA3-205ENST00000465471 PAFAH2Q99487 392 aa19.59■□□□□ 0.73
SKA3-205ENST00000465471 CTRCQ99895 268 aa19.59■□□□□ 0.73
SKA3-205ENST00000465471 PDE7BQ9NP56 450 aa19.59■□□□□ 0.73
SKA3-205ENST00000465471 SOHLH2Q9NX45 425 aa19.59■□□□□ 0.73
SKA3-205ENST00000465471 STOX2Q9P2F5 926 aaPredicted RBP19.59■□□□□ 0.73
SKA3-205ENST00000465471 ZNF180Q9UJW8 692 aa19.59■□□□□ 0.73
SKA3-205ENST00000465471 ANKRD12Q6UB98 2062 aa19.59■□□□□ 0.73
SKA3-205ENST00000465471 PCM1Q15154 2024 aa19.58■□□□□ 0.73
SKA3-205ENST00000465471 CDC7O00311 574 aa19.58■□□□□ 0.72
SKA3-205ENST00000465471 SYF2O95926 243 aaKnown RBP19.58■□□□□ 0.72
SKA3-205ENST00000465471 SLC35E2BP0CK96 405 aa19.58■□□□□ 0.72
SKA3-205ENST00000465471 GABRA4P48169 554 aa19.58■□□□□ 0.72
SKA3-205ENST00000465471 ARL4DP49703 201 aa19.58■□□□□ 0.72
SKA3-205ENST00000465471 VSNL1P62760 191 aa19.58■□□□□ 0.72
SKA3-205ENST00000465471 FOXM1Q08050 763 aa19.58■□□□□ 0.72
SKA3-205ENST00000465471 BMPR2Q13873 1038 aa19.58■□□□□ 0.72
SKA3-205ENST00000465471 LARP7Q4G0J3 582 aaKnown RBP eCLIP19.58■□□□□ 0.72
SKA3-205ENST00000465471 TMTC4Q5T4D3 741 aa19.58■□□□□ 0.72
SKA3-205ENST00000465471 MBOAT1Q6ZNC8 495 aa19.58■□□□□ 0.72
SKA3-205ENST00000465471 CDHR3Q6ZTQ4 885 aa19.58■□□□□ 0.72
SKA3-205ENST00000465471 CMC1Q7Z7K0 106 aa19.58■□□□□ 0.72
SKA3-205ENST00000465471 BPHLQ86WA6 291 aaPredicted RBP19.58■□□□□ 0.72
SKA3-205ENST00000465471 DTX1Q86Y01 620 aa19.58■□□□□ 0.72
SKA3-205ENST00000465471 FAM20CQ8IXL6 584 aa19.58■□□□□ 0.72
SKA3-205ENST00000465471 ZNF248Q8NDW4 579 aa19.58■□□□□ 0.72
SKA3-205ENST00000465471 OR2L3Q8NG85 312 aa19.58■□□□□ 0.72
SKA3-205ENST00000465471 DCAKDQ8WVC6 231 aa19.58■□□□□ 0.72
SKA3-205ENST00000465471 ISL2Q96A47 359 aa19.58■□□□□ 0.72
SKA3-205ENST00000465471 TCTN2Q96GX1 697 aa19.58■□□□□ 0.72
SKA3-205ENST00000465471 DHRS4Q9BTZ2 278 aa19.58■□□□□ 0.72
SKA3-205ENST00000465471 KLHL25Q9H0H3 589 aa19.58■□□□□ 0.72
SKA3-205ENST00000465471 FAM60AQ9NP50 221 aa19.58■□□□□ 0.72
SKA3-205ENST00000465471 FGF21Q9NSA1 209 aa19.58■□□□□ 0.72
SKA3-205ENST00000465471 URB1O60287 2271 aaKnown RBP19.58■□□□□ 0.72
SKA3-205ENST00000465471 A0A087WV48 116 aa19.57■□□□□ 0.72
SKA3-205ENST00000465471 NPEPPSL1A6NEC2 478 aa19.57■□□□□ 0.72
SKA3-205ENST00000465471 MAGP20916 626 aa19.57■□□□□ 0.72
SKA3-205ENST00000465471 CRABP2P29373 138 aa19.57■□□□□ 0.72
SKA3-205ENST00000465471 SF1Q15637 639 aaKnown RBP19.57■□□□□ 0.72
SKA3-205ENST00000465471 GPR19Q15760 415 aa19.57■□□□□ 0.72
SKA3-205ENST00000465471 ZXDCQ2QGD7 858 aaPredicted RBP19.57■□□□□ 0.72
SKA3-205ENST00000465471 MROH9Q5TGP6 573 aa19.57■□□□□ 0.72
SKA3-205ENST00000465471 KIAA1614Q5VZ46 1190 aa19.57■□□□□ 0.72
SKA3-205ENST00000465471 WDR93Q6P2C0 686 aa19.57■□□□□ 0.72
SKA3-205ENST00000465471 SUSD1Q6UWL2 747 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms