RNA–Protein interactions for RNA: ENST00000462482.1

SKA3-204, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-204ENST00000462482 RAB6BQ9NRW1 208 aa14.77□□□□□ -0.05
SKA3-204ENST00000462482 CIDEBQ9UHD4 219 aa14.77□□□□□ -0.05
SKA3-204ENST00000462482 TCAF1Q9Y4C2 921 aa14.77□□□□□ -0.05
SKA3-204ENST00000462482 TCRBV7S2A1N4TA0A589 114 aa14.76□□□□□ -0.05
SKA3-204ENST00000462482 RASGRF2O14827 1237 aa14.76□□□□□ -0.05
SKA3-204ENST00000462482 PFDN6O15212 129 aa14.76□□□□□ -0.05
SKA3-204ENST00000462482 LIASO43766 372 aa14.76□□□□□ -0.05
SKA3-204ENST00000462482 SRPX2O60687 465 aaPredicted RBP14.76□□□□□ -0.05
SKA3-204ENST00000462482 GPC4O75487 556 aa14.76□□□□□ -0.05
SKA3-204ENST00000462482 NDUFS3O75489 264 aa14.76□□□□□ -0.05
SKA3-204ENST00000462482 APRTP07741 180 aa14.76□□□□□ -0.05
SKA3-204ENST00000462482 AOAHP28039 575 aa14.76□□□□□ -0.05
SKA3-204ENST00000462482 GRIA3P42263 894 aa14.76□□□□□ -0.05
SKA3-204ENST00000462482 ACVR1Q04771 509 aa14.76□□□□□ -0.05
SKA3-204ENST00000462482 NAA25Q14CX7 972 aa14.76□□□□□ -0.05
SKA3-204ENST00000462482 NKG7Q16617 165 aa14.76□□□□□ -0.05
SKA3-204ENST00000462482 TUBB8Q3ZCM7 444 aa14.76□□□□□ -0.05
SKA3-204ENST00000462482 OTOAQ7RTW8 1153 aa14.76□□□□□ -0.05
SKA3-204ENST00000462482 OTUD6BQ8N6M0 293 aa14.76□□□□□ -0.05
SKA3-204ENST00000462482 LINC01555Q8NAE3 123 aa14.76□□□□□ -0.05
SKA3-204ENST00000462482 DNAJB14Q8TBM8 379 aa14.76□□□□□ -0.05
SKA3-204ENST00000462482 MAGEC3Q8TD91 643 aa14.76□□□□□ -0.05
SKA3-204ENST00000462482 PPP4R1Q8TF05 950 aa14.76□□□□□ -0.05
SKA3-204ENST00000462482 UBE2Q2Q8WVN8 375 aa14.76□□□□□ -0.05
SKA3-204ENST00000462482 IL17FQ96PD4 163 aa14.76□□□□□ -0.05
SKA3-204ENST00000462482 SLC26A1Q9H2B4 701 aa14.76□□□□□ -0.05
SKA3-204ENST00000462482 SLC6A20Q9NP91 592 aa14.76□□□□□ -0.05
SKA3-204ENST00000462482 SEMA3GQ9NS98 782 aa14.76□□□□□ -0.05
SKA3-204ENST00000462482 PAK5Q9P286 719 aa14.76□□□□□ -0.05
SKA3-204ENST00000462482 GNPTGQ9UJJ9 305 aa14.76□□□□□ -0.05
SKA3-204ENST00000462482 ERRFI1Q9UJM3 462 aaPredicted RBP14.76□□□□□ -0.05
SKA3-204ENST00000462482 PCDHGA10Q9Y5H3 936 aa14.76□□□□□ -0.05
SKA3-204ENST00000462482 IQCF5A8MTL0 148 aa14.75□□□□□ -0.05
SKA3-204ENST00000462482 TARM1B6A8C7 271 aa14.75□□□□□ -0.05
SKA3-204ENST00000462482 AP3B1O00203 1094 aa14.75□□□□□ -0.05
SKA3-204ENST00000462482 LDLRP01130 860 aa14.75□□□□□ -0.05
SKA3-204ENST00000462482 ERVK-10P10266 1014 aa14.75□□□□□ -0.05
SKA3-204ENST00000462482 CCNFP41002 786 aa14.75□□□□□ -0.05
SKA3-204ENST00000462482 CARSP49589 748 aaKnown RBP14.75□□□□□ -0.05
SKA3-204ENST00000462482 PER3P56645 1201 aa14.75□□□□□ -0.05
SKA3-204ENST00000462482 FOXL2P58012 376 aa14.75□□□□□ -0.05
SKA3-204ENST00000462482 OCA2Q04671 838 aa14.75□□□□□ -0.05
SKA3-204ENST00000462482 PCID2Q5JVF3 399 aa14.75□□□□□ -0.05
SKA3-204ENST00000462482 ZNF534Q76KX8 674 aa14.75□□□□□ -0.05
SKA3-204ENST00000462482 LRRC6Q86X45 466 aa14.75□□□□□ -0.05
SKA3-204ENST00000462482 VRK3Q8IV63 474 aa14.75□□□□□ -0.05
SKA3-204ENST00000462482 HES6Q96HZ4 224 aa14.75□□□□□ -0.05
SKA3-204ENST00000462482 CNDP1Q96KN2 507 aa14.75□□□□□ -0.05
SKA3-204ENST00000462482 LHPPQ9H008 270 aa14.75□□□□□ -0.05
SKA3-204ENST00000462482 SOX17Q9H6I2 414 aaPredicted RBP14.75□□□□□ -0.05
SKA3-204ENST00000462482 SLC22A11Q9NSA0 550 aa14.75□□□□□ -0.05
SKA3-204ENST00000462482 TTC7AQ9ULT0 858 aaPredicted RBP14.75□□□□□ -0.05
SKA3-204ENST00000462482 RP1L1Q8IWN7 2480 aaPredicted RBP14.75□□□□□ -0.05
SKA3-204ENST00000462482 SPTAN1Q13813 2472 aaKnown RBP14.74□□□□□ -0.05
SKA3-204ENST00000462482 MASP2O00187 686 aa14.74□□□□□ -0.05
SKA3-204ENST00000462482 CD3EAPO15446 510 aaKnown RBP14.74□□□□□ -0.05
SKA3-204ENST00000462482 SLCO2B1O94956 709 aa14.74□□□□□ -0.05
SKA3-204ENST00000462482 ONECUT2O95948 504 aa14.74□□□□□ -0.05
SKA3-204ENST00000462482 UQCRHP07919 91 aa14.74□□□□□ -0.05
SKA3-204ENST00000462482 RNF224P0DH78 156 aa14.74□□□□□ -0.05
SKA3-204ENST00000462482 GRIA1P42261 906 aa14.74□□□□□ -0.05
SKA3-204ENST00000462482 VSX2P58304 361 aaPredicted RBP14.74□□□□□ -0.05
SKA3-204ENST00000462482 CDC16Q13042 620 aa14.74□□□□□ -0.05
SKA3-204ENST00000462482 OASLQ15646 514 aaKnown RBP14.74□□□□□ -0.05
SKA3-204ENST00000462482 HIF1AQ16665 826 aa14.74□□□□□ -0.05
SKA3-204ENST00000462482 FCRL6Q6DN72 434 aa14.74□□□□□ -0.05
SKA3-204ENST00000462482 SHISA6Q6ZSJ9 500 aa14.74□□□□□ -0.05
SKA3-204ENST00000462482 SDCCAG8Q86SQ7 713 aaPredicted RBP14.74□□□□□ -0.05
SKA3-204ENST00000462482 CUZD1Q86UP6 607 aa14.74□□□□□ -0.05
SKA3-204ENST00000462482 PARP9Q8IXQ6 854 aa14.74□□□□□ -0.05
SKA3-204ENST00000462482 KRT222Q8N1A0 295 aa14.74□□□□□ -0.05
SKA3-204ENST00000462482 MPP5Q8N3R9 675 aa14.74□□□□□ -0.05
SKA3-204ENST00000462482 RNF10Q8N5U6 811 aaKnown RBP14.74□□□□□ -0.05
SKA3-204ENST00000462482 LMNTD1Q8N9Z9 388 aa14.74□□□□□ -0.05
SKA3-204ENST00000462482 ST6GALNAC3Q8NDV1 305 aa14.74□□□□□ -0.05
SKA3-204ENST00000462482 ZNF778Q96MU6 729 aa14.74□□□□□ -0.05
SKA3-204ENST00000462482 SPSB2Q99619 263 aa14.74□□□□□ -0.05
SKA3-204ENST00000462482 CRB3Q9BUF7 120 aa14.74□□□□□ -0.05
SKA3-204ENST00000462482 ZNF304Q9HCX3 659 aa14.74□□□□□ -0.05
SKA3-204ENST00000462482 BFARQ9NZS9 450 aa14.74□□□□□ -0.05
SKA3-204ENST00000462482 NOVA2Q9UNW9 492 aaKnown RBP14.74□□□□□ -0.05
SKA3-204ENST00000462482 HYKKA2RU49 373 aa14.73□□□□□ -0.05
SKA3-204ENST00000462482 WIPF3A6NGB9 483 aa14.73□□□□□ -0.05
SKA3-204ENST00000462482 SOCS6O14544 535 aa14.73□□□□□ -0.05
SKA3-204ENST00000462482 EIF2S1P05198 315 aaKnown RBP14.73□□□□□ -0.05
SKA3-204ENST00000462482 MCM3P25205 808 aa14.73□□□□□ -0.05
SKA3-204ENST00000462482 TSFMP43897 325 aaKnown RBP14.73□□□□□ -0.05
SKA3-204ENST00000462482 GCGRP47871 477 aa14.73□□□□□ -0.05
SKA3-204ENST00000462482 OR1D4P47884 311 aa14.73□□□□□ -0.05
SKA3-204ENST00000462482 SESN2P58004 480 aaPredicted RBP14.73□□□□□ -0.05
SKA3-204ENST00000462482 SNX1Q13596 522 aa14.73□□□□□ -0.05
SKA3-204ENST00000462482 GRB7Q14451 532 aa14.73□□□□□ -0.05
SKA3-204ENST00000462482 SEMA3AQ14563 771 aa14.73□□□□□ -0.05
SKA3-204ENST00000462482 ZNF169Q14929 603 aaPredicted RBP14.73□□□□□ -0.05
SKA3-204ENST00000462482 TLR1Q15399 786 aa14.73□□□□□ -0.05
SKA3-204ENST00000462482 WASHC2DQ5SRD0 308 aa14.73□□□□□ -0.05
SKA3-204ENST00000462482 B3GNTL1Q67FW5 361 aaPredicted RBP14.73□□□□□ -0.05
SKA3-204ENST00000462482 PRMT9Q6P2P2 845 aa14.73□□□□□ -0.05
SKA3-204ENST00000462482 C4orf22Q6V702 233 aa14.73□□□□□ -0.05
SKA3-204ENST00000462482 LDB1Q86U70 411 aaPredicted RBP14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms