RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 SLC9B1P1A6NJY1 282 aa2.81□□□□□ -1.96
HPS3-203ENST00000460822 RGS14O43566 566 aa2.81□□□□□ -1.96
HPS3-203ENST00000460822 LUC7L3O95232 432 aaKnown RBP2.81□□□□□ -1.96
HPS3-203ENST00000460822 GSRP00390 522 aa2.81□□□□□ -1.96
HPS3-203ENST00000460822 TPM2P07951 284 aa2.81□□□□□ -1.96
HPS3-203ENST00000460822 SBK2P0C263 348 aa2.81□□□□□ -1.96
HPS3-203ENST00000460822 SMIM18P0DKX4 95 aa2.81□□□□□ -1.96
HPS3-203ENST00000460822 SNHG28P0DPA3 235 aa2.81□□□□□ -1.96
HPS3-203ENST00000460822 VCLP18206 1134 aa2.81□□□□□ -1.96
HPS3-203ENST00000460822 C21orf33P30042 268 aaPredicted RBP2.81□□□□□ -1.96
HPS3-203ENST00000460822 SLC6A6P31641 620 aa2.81□□□□□ -1.96
HPS3-203ENST00000460822 CUL3Q13618 768 aa2.81□□□□□ -1.96
HPS3-203ENST00000460822 FHL1Q13642 323 aa2.81□□□□□ -1.96
HPS3-203ENST00000460822 DHX34Q14147 1143 aaKnown RBP2.81□□□□□ -1.96
HPS3-203ENST00000460822 SYT14P1Q58G82 188 aa2.81□□□□□ -1.96
HPS3-203ENST00000460822 FNBP1LQ5T0N5 605 aa2.81□□□□□ -1.96
HPS3-203ENST00000460822 C12orf60Q5U649 245 aa2.81□□□□□ -1.96
HPS3-203ENST00000460822 FAM69BQ5VUD6 431 aa2.81□□□□□ -1.96
HPS3-203ENST00000460822 PRAMEF8Q5VWM4 474 aa2.81□□□□□ -1.96
HPS3-203ENST00000460822 FAM109BQ6ICB4 259 aaPredicted RBP2.81□□□□□ -1.96
HPS3-203ENST00000460822 OLFM4Q6UX06 510 aa2.81□□□□□ -1.96
HPS3-203ENST00000460822 PPP1R42Q7Z4L9 355 aa2.81□□□□□ -1.96
HPS3-203ENST00000460822 ADCK1Q86TW2 530 aa2.81□□□□□ -1.96
HPS3-203ENST00000460822 SIAH3Q8IW03 269 aa2.81□□□□□ -1.96
HPS3-203ENST00000460822 ARHGAP24Q8N264 748 aa2.81□□□□□ -1.96
HPS3-203ENST00000460822 C9orf106Q8NAJ2 232 aa2.81□□□□□ -1.96
HPS3-203ENST00000460822 VANGL1Q8TAA9 524 aaPredicted RBP2.81□□□□□ -1.96
HPS3-203ENST00000460822 RNASE8Q8TDE3 154 aaKnown RBP2.81□□□□□ -1.96
HPS3-203ENST00000460822 WASF1Q92558 559 aa2.81□□□□□ -1.96
HPS3-203ENST00000460822 PANX3Q96QZ0 392 aa2.81□□□□□ -1.96
HPS3-203ENST00000460822 SLX1AQ9BQ83 275 aa2.81□□□□□ -1.96
HPS3-203ENST00000460822 TEX13BQ9BXU2 312 aa2.81□□□□□ -1.96
HPS3-203ENST00000460822 SLC2A11Q9BYW1 496 aa2.81□□□□□ -1.96
HPS3-203ENST00000460822 P2RY12Q9H244 342 aa2.81□□□□□ -1.96
HPS3-203ENST00000460822 LRMDAQ9H2I8 198 aa2.81□□□□□ -1.96
HPS3-203ENST00000460822 CDH20Q9HBT6 801 aa2.81□□□□□ -1.96
HPS3-203ENST00000460822 SPG21Q9NZD8 308 aa2.81□□□□□ -1.96
HPS3-203ENST00000460822 CGNQ9P2M7 1197 aaKnown RBP2.81□□□□□ -1.96
HPS3-203ENST00000460822 AURKCQ9UQB9 309 aa2.81□□□□□ -1.96
HPS3-203ENST00000460822 HBS1LQ9Y450 684 aaKnown RBP2.81□□□□□ -1.96
HPS3-203ENST00000460822 YIPF1Q9Y548 306 aa2.81□□□□□ -1.96
HPS3-203ENST00000460822 INSL5Q9Y5Q6 135 aa2.81□□□□□ -1.96
HPS3-203ENST00000460822 SPIN1Q9Y657 262 aaPredicted RBP2.81□□□□□ -1.96
HPS3-203ENST00000460822 CCDC7Q96M83 1385 aa2.81□□□□□ -1.96
HPS3-203ENST00000460822 NAIPQ13075 1403 aa2.81□□□□□ -1.96
HPS3-203ENST00000460822 PTPRKQ15262 1439 aa2.81□□□□□ -1.96
HPS3-203ENST00000460822 DENND4BO75064 1496 aaPredicted RBP2.81□□□□□ -1.96
HPS3-203ENST00000460822 EFCAB5A4FU69 1503 aa2.81□□□□□ -1.96
HPS3-203ENST00000460822 SUPT6HQ7KZ85 1726 aaKnown RBP2.81□□□□□ -1.96
HPS3-203ENST00000460822 FLRT2O43155 660 aa2.81□□□□□ -1.96
HPS3-203ENST00000460822 GPR137BO60478 399 aa2.81□□□□□ -1.96
HPS3-203ENST00000460822 NOL3O60936 208 aaKnown RBP2.81□□□□□ -1.96
HPS3-203ENST00000460822 RFPL2O75678 378 aa2.81□□□□□ -1.96
HPS3-203ENST00000460822 GLCEO94923 617 aa2.81□□□□□ -1.96
HPS3-203ENST00000460822 LETM1O95202 739 aaPredicted RBP2.81□□□□□ -1.96
HPS3-203ENST00000460822 TRIM16O95361 564 aa2.81□□□□□ -1.96
HPS3-203ENST00000460822 IFNB1P01574 187 aa2.81□□□□□ -1.96
HPS3-203ENST00000460822 ANKRD34CP0C6C1 535 aa2.81□□□□□ -1.96
HPS3-203ENST00000460822 C8orf89P0DMQ9 161 aa2.81□□□□□ -1.96
HPS3-203ENST00000460822 SAGP10523 405 aaPredicted RBP2.81□□□□□ -1.96
HPS3-203ENST00000460822 GHRP10912 638 aa2.81□□□□□ -1.96
HPS3-203ENST00000460822 SSTR2P30874 369 aa2.81□□□□□ -1.96
HPS3-203ENST00000460822 GSDMDP57764 484 aa2.81□□□□□ -1.96
HPS3-203ENST00000460822 GFPT1Q06210 699 aaPredicted RBP2.81□□□□□ -1.96
HPS3-203ENST00000460822 VEZF1Q14119 521 aa2.81□□□□□ -1.96
HPS3-203ENST00000460822 RBMS2Q15434 407 aaKnown RBP2.81□□□□□ -1.96
HPS3-203ENST00000460822 CTU2Q2VPK5 515 aaKnown RBP2.81□□□□□ -1.96
HPS3-203ENST00000460822 PRTGQ2VWP7 1150 aa2.81□□□□□ -1.96
HPS3-203ENST00000460822 KLC3Q6P597 504 aa2.81□□□□□ -1.96
HPS3-203ENST00000460822 MIER3Q7Z3K6 550 aa2.81□□□□□ -1.96
HPS3-203ENST00000460822 PIP4P1Q86T03 277 aa2.81□□□□□ -1.96
HPS3-203ENST00000460822 SERPINA12Q8IW75 414 aa2.81□□□□□ -1.96
HPS3-203ENST00000460822 AQP12AQ8IXF9 295 aa2.81□□□□□ -1.96
HPS3-203ENST00000460822 APCDD1Q8J025 514 aa2.81□□□□□ -1.96
HPS3-203ENST00000460822 ZNF548Q8NEK5 533 aaPredicted RBP2.81□□□□□ -1.96
HPS3-203ENST00000460822 MPLKIPQ8TAP9 179 aa2.81□□□□□ -1.96
HPS3-203ENST00000460822 URGCPQ8TCY9 931 aa2.81□□□□□ -1.96
HPS3-203ENST00000460822 UBLCP1Q8WVY7 318 aaPredicted RBP2.81□□□□□ -1.96
HPS3-203ENST00000460822 ZNF606Q8WXB4 792 aa2.81□□□□□ -1.96
HPS3-203ENST00000460822 COQ8BQ96D53 544 aa2.81□□□□□ -1.96
HPS3-203ENST00000460822 SNRNP40Q96DI7 357 aaKnown RBP2.81□□□□□ -1.96
HPS3-203ENST00000460822 OXNAD1Q96HP4 312 aaPredicted RBP2.81□□□□□ -1.96
HPS3-203ENST00000460822 FAM84BQ96KN1 310 aaPredicted RBP2.81□□□□□ -1.96
HPS3-203ENST00000460822 C3orf30Q96M34 536 aa2.81□□□□□ -1.96
HPS3-203ENST00000460822 BTBD10Q9BSF8 475 aa2.81□□□□□ -1.96
HPS3-203ENST00000460822 SNX25Q9H3E2 840 aa2.81□□□□□ -1.96
HPS3-203ENST00000460822 EBF3Q9H4W6 596 aa2.81□□□□□ -1.96
HPS3-203ENST00000460822 PCDH9Q9HC56 1237 aa2.81□□□□□ -1.96
HPS3-203ENST00000460822 PRMT8Q9NR22 394 aaPredicted RBP2.81□□□□□ -1.96
HPS3-203ENST00000460822 COMMD8Q9NX08 183 aa2.81□□□□□ -1.96
HPS3-203ENST00000460822 SLCO1C1Q9NYB5 712 aa2.81□□□□□ -1.96
HPS3-203ENST00000460822 TXNDC16Q9P2K2 825 aa2.81□□□□□ -1.96
HPS3-203ENST00000460822 FZD10Q9ULW2 581 aa2.81□□□□□ -1.96
HPS3-203ENST00000460822 GPR132Q9UNW8 380 aa2.81□□□□□ -1.96
HPS3-203ENST00000460822 NUDCQ9Y266 331 aa2.81□□□□□ -1.96
HPS3-203ENST00000460822 PTGDR2Q9Y5Y4 395 aa2.81□□□□□ -1.96
HPS3-203ENST00000460822 HS3ST3B1Q9Y662 390 aa2.81□□□□□ -1.96
HPS3-203ENST00000460822 IKBKGQ9Y6K9 419 aa2.81□□□□□ -1.96
HPS3-203ENST00000460822 ATP8B3O60423 1300 aa2.81□□□□□ -1.96
HPS3-203ENST00000460822 PRAG1Q86YV5 1406 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms