RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 SLC26A9Q7LBE3 791 aa4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 CNTN4Q8IWV2 1026 aa4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 TMEM199Q8N511 208 aa4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 NPLOC4Q8TAT6 608 aa4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 SLC25A28Q96A46 364 aa4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 EID2BQ96D98 161 aa4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 ZBED6CLQ96FA7 236 aaPredicted RBP4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 ZIC5Q96T25 663 aa4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 NIPSNAP1Q9BPW8 284 aa4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 KCNS3Q9BQ31 491 aa4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 DPH2Q9BQC3 489 aaPredicted RBP4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 SEC22CQ9BRL7 303 aa4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 MRPL9Q9BYD2 267 aaKnown RBP4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 PPP1R3EQ9H7J1 279 aa4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 ENTPD7Q9NQZ7 604 aa4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 MCUBQ9NWR8 336 aa4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 PCDHB7Q9Y5E2 793 aa4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 PCDHGA6Q9Y5G7 932 aa4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 HSPE1-MOB4S4R3N1 261 aa4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 DOCK1Q14185 1865 aa4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 DENND4AQ7Z401 1863 aa4.43□□□□□ -1.7
DEPDC1-202ENST00000456315 IGKV6D-21A0A0A0MT36 114 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 OR6C70A6NIJ9 312 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 ERI2A8K979 691 aaKnown RBP4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 SEC14L5O43304 696 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 TBC1D4O60343 1298 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 APOL3O95236 402 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 ICAM1P05362 532 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 JUNDP17535 347 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 MSH3P20585 1137 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 DNAJB1P25685 340 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 RAB8AP61006 207 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 GSTO1P78417 241 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 EMX2Q04743 252 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 KCNA10Q16322 511 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 C5orf22Q49AR2 442 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 TMEM81Q6P7N7 255 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 PSTKQ8IV42 348 aaKnown RBP4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 C9orf62Q8N4C0 152 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 LINC00469Q8N7U9 141 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 OR7D4Q8NG98 312 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 SLC16A10Q8TF71 515 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 TMEM80Q96HE8 168 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 C1orf74Q96LT6 269 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 GHITMQ9H3K2 345 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 KAT8Q9H7Z6 458 aaKnown RBP4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 CYP3A43Q9HB55 503 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 RAD18Q9NS91 495 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 SNX7Q9UNH6 387 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 PRKAB1Q9Y478 270 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 ARHGEF17Q96PE2 2063 aaPredicted RBP4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 PAPPA2Q9BXP8 1791 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 LRRK1Q38SD2 2015 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 CELSR2Q9HCU4 2923 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 DOCK11Q5JSL3 2073 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 TBKBP1A7MCY6 615 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 HS6ST1O60243 411 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 AOC2O75106 756 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 PSMA4P25789 261 aaKnown RBP4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 SSTR2P30874 369 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 SDC4P31431 198 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 RGS6P49758 472 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 RPP38P78345 283 aaKnown RBP4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 SLC6A3Q01959 620 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 HSPA14Q0VDF9 509 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 TARDBPQ13148 414 aaKnown RBP eCLIP4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 FRG1Q14331 258 aaKnown RBP4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 RBMS2Q15434 407 aaKnown RBP4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 TSNQ15631 228 aaKnown RBP4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 SF1Q15637 639 aaKnown RBP4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 LEXMQ3ZCV2 418 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 ADNP2Q6IQ32 1131 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 PAQR3Q6TCH7 311 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 LINC00299Q6ZSB3 139 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 ZDHHC13Q8IUH4 622 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 SULF1Q8IWU6 871 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 MICU2Q8IYU8 434 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 ZNF366Q8N895 744 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 TEPSINQ96N21 525 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 RBP7Q96R05 134 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 GMLQ99445 158 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 OR2B2Q9GZK3 357 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 WDR12Q9GZL7 423 aaKnown RBP4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 FZD8Q9H461 694 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 C12orf10Q9HB07 376 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 SEMA4BQ9NPR2 832 aaPredicted RBP4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 AIG1Q9NVV5 245 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 ZNF652Q9Y2D9 606 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 NDUFAF1Q9Y375 327 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 MAFBQ9Y5Q3 323 aaPredicted RBP4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 LTBP3Q9NS15 1303 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 DOCK10Q96BY6 2186 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 SIP14410 1827 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 PCNX1Q96RV3 2341 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 PNMA8CA0A1B0GUJ8 204 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 TYW5A2RUC4 315 aaKnown RBP4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 PER2O15055 1255 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 ASNA1O43681 348 aa4.42□□□□□ -1.7
DEPDC1-202ENST00000456315 ACSL4O60488 711 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms