RNA–Protein interactions for RNA: ENST00000448056.1

AC004540.1-206, humanhuman

TSL 3

Gene AC004540.1, Length 567 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-206ENST00000448056 LINC01555Q8NAE3 123 aa7.31□□□□□ -1.24
AC004540.1-206ENST00000448056 OR2L8Q8NGY9 312 aa7.31□□□□□ -1.24
AC004540.1-206ENST00000448056 OR10G6Q8NH81 332 aa7.31□□□□□ -1.24
AC004540.1-206ENST00000448056 DENND1AQ8TEH3 1009 aa7.31□□□□□ -1.24
AC004540.1-206ENST00000448056 AHCYL2Q96HN2 611 aaKnown RBP7.31□□□□□ -1.24
AC004540.1-206ENST00000448056 SCYL1Q96KG9 808 aa7.31□□□□□ -1.24
AC004540.1-206ENST00000448056 TSNARE1Q96NA8 513 aa7.31□□□□□ -1.24
AC004540.1-206ENST00000448056 IL17FQ96PD4 163 aa7.31□□□□□ -1.24
AC004540.1-206ENST00000448056 SMC6Q96SB8 1091 aa7.31□□□□□ -1.24
AC004540.1-206ENST00000448056 ATOH8Q96SQ7 321 aa7.31□□□□□ -1.24
AC004540.1-206ENST00000448056 SH3GL2Q99962 352 aa7.31□□□□□ -1.24
AC004540.1-206ENST00000448056 MRPL57Q9BQC6 102 aaKnown RBP7.31□□□□□ -1.24
AC004540.1-206ENST00000448056 TWSG1Q9GZX9 223 aa7.31□□□□□ -1.24
AC004540.1-206ENST00000448056 STMN4Q9H169 189 aaPredicted RBP7.31□□□□□ -1.24
AC004540.1-206ENST00000448056 ABCG4Q9H172 646 aa7.31□□□□□ -1.24
AC004540.1-206ENST00000448056 LRRN3Q9H3W5 708 aa7.31□□□□□ -1.24
AC004540.1-206ENST00000448056 EPB41L1Q9H4G0 881 aa7.31□□□□□ -1.24
AC004540.1-206ENST00000448056 HRASLS2Q9NWW9 162 aa7.31□□□□□ -1.24
AC004540.1-206ENST00000448056 ARL15Q9NXU5 204 aa7.31□□□□□ -1.24
AC004540.1-206ENST00000448056 UTP6Q9NYH9 597 aaKnown RBP7.31□□□□□ -1.24
AC004540.1-206ENST00000448056 OR6C2Q9NZP2 312 aa7.31□□□□□ -1.24
AC004540.1-206ENST00000448056 OGFRQ9NZT2 677 aa7.31□□□□□ -1.24
AC004540.1-206ENST00000448056 TMEM216Q9P0N5 145 aa7.31□□□□□ -1.24
AC004540.1-206ENST00000448056 SENP1Q9P0U3 644 aa7.31□□□□□ -1.24
AC004540.1-206ENST00000448056 SPATA7Q9P0W8 599 aa7.31□□□□□ -1.24
AC004540.1-206ENST00000448056 GRID1Q9ULK0 1009 aa7.31□□□□□ -1.24
AC004540.1-206ENST00000448056 PCDHGA1Q9Y5H4 931 aa7.31□□□□□ -1.24
AC004540.1-206ENST00000448056 DMXL1Q9Y485 3027 aa7.31□□□□□ -1.24
AC004540.1-206ENST00000448056 CFAP54Q96N23 3096 aa7.3□□□□□ -1.24
AC004540.1-206ENST00000448056 SPAARA0A1B0GVQ0 90 aa7.3□□□□□ -1.24
AC004540.1-206ENST00000448056 A0A1W2PQM1 296 aa7.3□□□□□ -1.24
AC004540.1-206ENST00000448056 FAM221BA6H8Z2 402 aa7.3□□□□□ -1.24
AC004540.1-206ENST00000448056 PABPN1LA6NDY0 278 aaKnown RBP7.3□□□□□ -1.24
AC004540.1-206ENST00000448056 OR5K3A6NET4 321 aa7.3□□□□□ -1.24
AC004540.1-206ENST00000448056 ZNF839A8K0R7 811 aa7.3□□□□□ -1.24
AC004540.1-206ENST00000448056 SYCE1LA8MT33 242 aa7.3□□□□□ -1.24
AC004540.1-206ENST00000448056 TARM1B6A8C7 271 aa7.3□□□□□ -1.24
AC004540.1-206ENST00000448056 E7ENX8 843 aa7.3□□□□□ -1.24
AC004540.1-206ENST00000448056 BTN3A3O00478 584 aa7.3□□□□□ -1.24
AC004540.1-206ENST00000448056 NTN3O00634 580 aaPredicted RBP7.3□□□□□ -1.24
AC004540.1-206ENST00000448056 COPEO14579 308 aa7.3□□□□□ -1.24
AC004540.1-206ENST00000448056 GIPC1O14908 333 aa7.3□□□□□ -1.24
AC004540.1-206ENST00000448056 ATP8B1O43520 1251 aa7.3□□□□□ -1.24
AC004540.1-206ENST00000448056 OPA1O60313 960 aa7.3□□□□□ -1.24
AC004540.1-206ENST00000448056 GLRA3O75311 464 aa7.3□□□□□ -1.24
AC004540.1-206ENST00000448056 SPAG7O75391 227 aa7.3□□□□□ -1.24
AC004540.1-206ENST00000448056 DKK1O94907 266 aa7.3□□□□□ -1.24
AC004540.1-206ENST00000448056 RPLP0P05388 317 aaKnown RBP7.3□□□□□ -1.24
AC004540.1-206ENST00000448056 PROS1P07225 676 aa7.3□□□□□ -1.24
AC004540.1-206ENST00000448056 ANXA5P08758 320 aa7.3□□□□□ -1.24
AC004540.1-206ENST00000448056 CHRM5P08912 532 aaPredicted RBP7.3□□□□□ -1.24
AC004540.1-206ENST00000448056 SBK3P0C264 359 aa7.3□□□□□ -1.24
AC004540.1-206ENST00000448056 ERGP11308 486 aa7.3□□□□□ -1.24
AC004540.1-206ENST00000448056 CDK4P11802 303 aa7.3□□□□□ -1.24
AC004540.1-206ENST00000448056 MTHFD2P13995 350 aa7.3□□□□□ -1.24
AC004540.1-206ENST00000448056 POLR2CP19387 275 aaPredicted RBP7.3□□□□□ -1.24
AC004540.1-206ENST00000448056 IMPA1P29218 277 aa7.3□□□□□ -1.24
AC004540.1-206ENST00000448056 PKLRP30613 574 aa7.3□□□□□ -1.24
AC004540.1-206ENST00000448056 SCTRP47872 440 aa7.3□□□□□ -1.24
AC004540.1-206ENST00000448056 HNMTP50135 292 aa7.3□□□□□ -1.24
AC004540.1-206ENST00000448056 KPNA2P52292 529 aaKnown RBP7.3□□□□□ -1.24
AC004540.1-206ENST00000448056 PNLIPRP1P54315 467 aa7.3□□□□□ -1.24
AC004540.1-206ENST00000448056 TAP2Q03519 686 aa7.3□□□□□ -1.24
AC004540.1-206ENST00000448056 FASTKQ14296 549 aaKnown RBP7.3□□□□□ -1.24
AC004540.1-206ENST00000448056 ZXDCQ2QGD7 858 aaPredicted RBP7.3□□□□□ -1.24
AC004540.1-206ENST00000448056 TECRLQ5HYJ1 363 aa7.3□□□□□ -1.24
AC004540.1-206ENST00000448056 N4BP2L1Q5TBK1 243 aaPredicted RBP7.3□□□□□ -1.24
AC004540.1-206ENST00000448056 SULT1C3Q6IMI6 304 aa7.3□□□□□ -1.24
AC004540.1-206ENST00000448056 C16orf46Q6P387 395 aa7.3□□□□□ -1.24
AC004540.1-206ENST00000448056 KLHL35Q6PF15 583 aa7.3□□□□□ -1.24
AC004540.1-206ENST00000448056 WDR74Q6RFH5 385 aaPredicted RBP7.3□□□□□ -1.24
AC004540.1-206ENST00000448056 AGTRAPQ6RW13 159 aa7.3□□□□□ -1.24
AC004540.1-206ENST00000448056 MBOAT1Q6ZNC8 495 aa7.3□□□□□ -1.24
AC004540.1-206ENST00000448056 FRA10AC1Q70Z53 315 aa7.3□□□□□ -1.24
AC004540.1-206ENST00000448056 SLCO6A1Q86UG4 719 aa7.3□□□□□ -1.24
AC004540.1-206ENST00000448056 LRRC56Q8IYG6 542 aaPredicted RBP7.3□□□□□ -1.24
AC004540.1-206ENST00000448056 DEPDC4Q8N2C3 294 aa7.3□□□□□ -1.24
AC004540.1-206ENST00000448056 C2orf73Q8N5S3 287 aaPredicted RBP7.3□□□□□ -1.24
AC004540.1-206ENST00000448056 LMNTD1Q8N9Z9 388 aa7.3□□□□□ -1.24
AC004540.1-206ENST00000448056 HMGCLL1Q8TB92 370 aa7.3□□□□□ -1.24
AC004540.1-206ENST00000448056 ZNF480Q8WV37 535 aa7.3□□□□□ -1.24
AC004540.1-206ENST00000448056 ATL1Q8WXF7 558 aa7.3□□□□□ -1.24
AC004540.1-206ENST00000448056 NCSTNQ92542 709 aa7.3□□□□□ -1.24
AC004540.1-206ENST00000448056 ARL8AQ96BM9 186 aa7.3□□□□□ -1.24
AC004540.1-206ENST00000448056 ALKBH8Q96BT7 664 aaKnown RBP7.3□□□□□ -1.24
AC004540.1-206ENST00000448056 RHBDF1Q96CC6 855 aa7.3□□□□□ -1.24
AC004540.1-206ENST00000448056 FBXL8Q96CD0 374 aa7.3□□□□□ -1.24
AC004540.1-206ENST00000448056 TLCD1Q96CP7 247 aa7.3□□□□□ -1.24
AC004540.1-206ENST00000448056 PKNOX2Q96KN3 472 aa7.3□□□□□ -1.24
AC004540.1-206ENST00000448056 RTKNQ9BST9 563 aa7.3□□□□□ -1.24
AC004540.1-206ENST00000448056 RAB11FIP5Q9BXF6 653 aa7.3□□□□□ -1.24
AC004540.1-206ENST00000448056 RAB33BQ9H082 229 aa7.3□□□□□ -1.24
AC004540.1-206ENST00000448056 MRPL46Q9H2W6 279 aaKnown RBP7.3□□□□□ -1.24
AC004540.1-206ENST00000448056 ZFAND3Q9H8U3 227 aa7.3□□□□□ -1.24
AC004540.1-206ENST00000448056 SSU72Q9NP77 194 aaKnown RBP7.3□□□□□ -1.24
AC004540.1-206ENST00000448056 MKS1Q9NXB0 559 aa7.3□□□□□ -1.24
AC004540.1-206ENST00000448056 SPHK1Q9NYA1 384 aa7.3□□□□□ -1.24
AC004540.1-206ENST00000448056 CD274Q9NZQ7 290 aa7.3□□□□□ -1.24
AC004540.1-206ENST00000448056 STOX2Q9P2F5 926 aaPredicted RBP7.3□□□□□ -1.24
AC004540.1-206ENST00000448056 CPSF2Q9P2I0 782 aaKnown RBP7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms