RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 NLGN3Q9NZ94 848 aa18.93■□□□□ 0.62
SGCE-207ENST00000447873 ICKQ9UPZ9 632 aa18.93■□□□□ 0.62
SGCE-207ENST00000447873 SLC34A2O95436 690 aa18.92■□□□□ 0.62
SGCE-207ENST00000447873 CHRNGP07510 517 aa18.92■□□□□ 0.62
SGCE-207ENST00000447873 ALPPL2P10696 532 aa18.92■□□□□ 0.62
SGCE-207ENST00000447873 TSPAN8P19075 237 aa18.92■□□□□ 0.62
SGCE-207ENST00000447873 CCND1P24385 295 aa18.92■□□□□ 0.62
SGCE-207ENST00000447873 PKLRP30613 574 aa18.92■□□□□ 0.62
SGCE-207ENST00000447873 ARRB2P32121 409 aa18.92■□□□□ 0.62
SGCE-207ENST00000447873 SHMT2P34897 504 aa18.92■□□□□ 0.62
SGCE-207ENST00000447873 FASLGP48023 281 aa18.92■□□□□ 0.62
SGCE-207ENST00000447873 LCP2Q13094 533 aa18.92■□□□□ 0.62
SGCE-207ENST00000447873 RBBP7Q16576 425 aa18.92■□□□□ 0.62
SGCE-207ENST00000447873 SUSD1Q6UWL2 747 aa18.92■□□□□ 0.62
SGCE-207ENST00000447873 KANSL1Q7Z3B3 1105 aa18.92■□□□□ 0.62
SGCE-207ENST00000447873 THOC6Q86W42 341 aaKnown RBP18.92■□□□□ 0.62
SGCE-207ENST00000447873 AMIGO1Q86WK6 493 aa18.92■□□□□ 0.62
SGCE-207ENST00000447873 C2orf73Q8N5S3 287 aaPredicted RBP18.92■□□□□ 0.62
SGCE-207ENST00000447873 SNX31Q8N9S9 440 aa18.92■□□□□ 0.62
SGCE-207ENST00000447873 LMNTD1Q8N9Z9 388 aa18.92■□□□□ 0.62
SGCE-207ENST00000447873 OR4E2Q8NGC2 313 aa18.92■□□□□ 0.62
SGCE-207ENST00000447873 JPH3Q8WXH2 748 aaPredicted RBP18.92■□□□□ 0.62
SGCE-207ENST00000447873 CHMP6Q96FZ7 201 aa18.92■□□□□ 0.62
SGCE-207ENST00000447873 ZNF317Q96PQ6 595 aaPredicted RBP18.92■□□□□ 0.62
SGCE-207ENST00000447873 DUSP23Q9BVJ7 150 aa18.92■□□□□ 0.62
SGCE-207ENST00000447873 INTS7Q9NVH2 962 aaKnown RBP18.92■□□□□ 0.62
SGCE-207ENST00000447873 GPR179Q6PRD1 2367 aa18.92■□□□□ 0.62
SGCE-207ENST00000447873 GMNCA6NCL1 334 aa18.91■□□□□ 0.62
SGCE-207ENST00000447873 SHOX2O60902 331 aaPredicted RBP18.91■□□□□ 0.62
SGCE-207ENST00000447873 SNUPNO95149 360 aaKnown RBP18.91■□□□□ 0.62
SGCE-207ENST00000447873 MLYCDO95822 493 aa18.91■□□□□ 0.62
SGCE-207ENST00000447873 GIMD1P0DJR0 217 aa18.91■□□□□ 0.62
SGCE-207ENST00000447873 CBX1P83916 185 aa18.91■□□□□ 0.62
SGCE-207ENST00000447873 OCRLQ01968 901 aa18.91■□□□□ 0.62
SGCE-207ENST00000447873 GALNT1Q10472 559 aaPredicted RBP18.91■□□□□ 0.62
SGCE-207ENST00000447873 C14orf28Q4W4Y0 310 aa18.91■□□□□ 0.62
SGCE-207ENST00000447873 THEMIS2Q5TEJ8 643 aa18.91■□□□□ 0.62
SGCE-207ENST00000447873 TMEM26Q6ZUK4 368 aa18.91■□□□□ 0.62
SGCE-207ENST00000447873 C17orf82Q86X59 251 aaPredicted RBP18.91■□□□□ 0.62
SGCE-207ENST00000447873 KLHDC8AQ8IYD2 350 aa18.91■□□□□ 0.62
SGCE-207ENST00000447873 LRRC56Q8IYG6 542 aaPredicted RBP18.91■□□□□ 0.62
SGCE-207ENST00000447873 LRRC34Q8IZ02 419 aa18.91■□□□□ 0.62
SGCE-207ENST00000447873 MINDY1Q8N5J2 469 aa18.91■□□□□ 0.62
SGCE-207ENST00000447873 ARL10Q8N8L6 244 aa18.91■□□□□ 0.62
SGCE-207ENST00000447873 GPR156Q8NFN8 814 aa18.91■□□□□ 0.62
SGCE-207ENST00000447873 OR2L8Q8NGY9 312 aa18.91■□□□□ 0.62
SGCE-207ENST00000447873 SMPDL3AQ92484 453 aa18.91■□□□□ 0.62
SGCE-207ENST00000447873 ATP6V1E2Q96A05 226 aa18.91■□□□□ 0.62
SGCE-207ENST00000447873 SH3KBP1Q96B97 665 aa18.91■□□□□ 0.62
SGCE-207ENST00000447873 SHCBP1LQ9BZQ2 653 aa18.91■□□□□ 0.62
SGCE-207ENST00000447873 SRMSQ9H3Y6 488 aa18.91■□□□□ 0.62
SGCE-207ENST00000447873 NOL11Q9H8H0 719 aaKnown RBP18.91■□□□□ 0.62
SGCE-207ENST00000447873 IPPKQ9H8X2 491 aa18.91■□□□□ 0.62
SGCE-207ENST00000447873 ZBTB26Q9HCK0 441 aa18.91■□□□□ 0.62
SGCE-207ENST00000447873 OR6C2Q9NZP2 312 aa18.91■□□□□ 0.62
SGCE-207ENST00000447873 GIPC1O14908 333 aa18.9■□□□□ 0.62
SGCE-207ENST00000447873 KATNA1O75449 491 aa18.9■□□□□ 0.62
SGCE-207ENST00000447873 SEC24CP53992 1094 aa18.9■□□□□ 0.62
SGCE-207ENST00000447873 CRLF3Q8IUI8 442 aa18.9■□□□□ 0.62
SGCE-207ENST00000447873 LSMEM2Q8N112 164 aa18.9■□□□□ 0.62
SGCE-207ENST00000447873 KYQ8NBH2 561 aa18.9■□□□□ 0.62
SGCE-207ENST00000447873 HMGCLL1Q8TB92 370 aa18.9■□□□□ 0.62
SGCE-207ENST00000447873 C7orf26Q96N11 449 aa18.9■□□□□ 0.62
SGCE-207ENST00000447873 SORT1Q99523 831 aa18.9■□□□□ 0.62
SGCE-207ENST00000447873 MIPEPQ99797 713 aa18.9■□□□□ 0.62
SGCE-207ENST00000447873 SGPP1Q9BX95 441 aa18.9■□□□□ 0.62
SGCE-207ENST00000447873 ILKAPQ9H0C8 392 aaPredicted RBP18.9■□□□□ 0.62
SGCE-207ENST00000447873 MID1IP1Q9NPA3 183 aa18.9■□□□□ 0.62
SGCE-207ENST00000447873 FGFR1OP2Q9NVK5 253 aa18.9■□□□□ 0.62
SGCE-207ENST00000447873 GOLGA4Q13439 2230 aaKnown RBP18.9■□□□□ 0.62
SGCE-207ENST00000447873 ARID1BQ8NFD5 2236 aaPredicted RBP18.9■□□□□ 0.62
SGCE-207ENST00000447873 PPP6CO00743 305 aa18.89■□□□□ 0.62
SGCE-207ENST00000447873 ARL1P40616 181 aaPredicted RBP18.89■□□□□ 0.62
SGCE-207ENST00000447873 CCNG1P51959 295 aa18.89■□□□□ 0.62
SGCE-207ENST00000447873 CDC16Q13042 620 aa18.89■□□□□ 0.62
SGCE-207ENST00000447873 PRKAA1Q13131 559 aa18.89■□□□□ 0.62
SGCE-207ENST00000447873 CHCHD2P9Q5T1J5 151 aaPredicted RBP18.89■□□□□ 0.62
SGCE-207ENST00000447873 ZCCHC8Q6NZY4 707 aaKnown RBP18.89■□□□□ 0.62
SGCE-207ENST00000447873 ATG14Q6ZNE5 492 aa18.89■□□□□ 0.62
SGCE-207ENST00000447873 CUZD1Q86UP6 607 aa18.89■□□□□ 0.62
SGCE-207ENST00000447873 LINC01555Q8NAE3 123 aa18.89■□□□□ 0.62
SGCE-207ENST00000447873 OR4C6Q8NH72 309 aa18.89■□□□□ 0.62
SGCE-207ENST00000447873 STK38LQ9Y2H1 464 aa18.89■□□□□ 0.62
SGCE-207ENST00000447873 KCNE2Q9Y6J6 123 aa18.89■□□□□ 0.62
SGCE-207ENST00000447873 LNP1A1A4G5 178 aa18.89■□□□□ 0.61
SGCE-207ENST00000447873 UBFD1O14562 309 aaKnown RBP18.89■□□□□ 0.61
SGCE-207ENST00000447873 OR7A17O14581 309 aa18.89■□□□□ 0.61
SGCE-207ENST00000447873 PPM1DO15297 605 aa18.89■□□□□ 0.61
SGCE-207ENST00000447873 PCDHGA12O60330 932 aa18.89■□□□□ 0.61
SGCE-207ENST00000447873 EDF1O60869 148 aaKnown RBP18.89■□□□□ 0.61
SGCE-207ENST00000447873 OTCP00480 354 aa18.89■□□□□ 0.61
SGCE-207ENST00000447873 ZNF806P0C7X5 589 aa18.89■□□□□ 0.61
SGCE-207ENST00000447873 SH3BP2P78314 561 aa18.89■□□□□ 0.61
SGCE-207ENST00000447873 PRAMEF13Q5VWM6 474 aa18.89■□□□□ 0.61
SGCE-207ENST00000447873 ZNF761Q86XN6 746 aaPredicted RBP18.89■□□□□ 0.61
SGCE-207ENST00000447873 SLC35F3Q8IY50 421 aa18.89■□□□□ 0.61
SGCE-207ENST00000447873 OR52B6Q8NGF0 335 aa18.89■□□□□ 0.61
SGCE-207ENST00000447873 SETD7Q8WTS6 366 aaKnown RBP18.89■□□□□ 0.61
SGCE-207ENST00000447873 OR4K3Q96R72 315 aa18.89■□□□□ 0.61
SGCE-207ENST00000447873 SLC38A3Q99624 504 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms