RNA–Protein interactions for RNA: ENST00000445866.6

SGCE-206, Transcript of sarcoglycan epsilon, humanhuman

TSL 5 BASIC

Gene SGCE, Length 1,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-206ENST00000445866 CCNT2O60583 730 aaKnown RBP16.85■□□□□ 0.29
SGCE-206ENST00000445866 CBFA2T3O75081 653 aa16.85■□□□□ 0.29
SGCE-206ENST00000445866 SIX3O95343 332 aaPredicted RBP16.85■□□□□ 0.29
SGCE-206ENST00000445866 BPGMP07738 259 aa16.85■□□□□ 0.29
SGCE-206ENST00000445866 CHRM5P08912 532 aaPredicted RBP16.85■□□□□ 0.29
SGCE-206ENST00000445866 ERGP11308 486 aa16.85■□□□□ 0.29
SGCE-206ENST00000445866 IMPDH1P20839 514 aa16.85■□□□□ 0.29
SGCE-206ENST00000445866 PRKAA1Q13131 559 aa16.85■□□□□ 0.29
SGCE-206ENST00000445866 SETDB1Q15047 1291 aa16.85■□□□□ 0.29
SGCE-206ENST00000445866 PERM1Q5SV97 790 aa16.85■□□□□ 0.29
SGCE-206ENST00000445866 CAPN13Q6MZZ7 669 aaPredicted RBP16.85■□□□□ 0.29
SGCE-206ENST00000445866 USP53Q70EK8 1073 aa16.85■□□□□ 0.29
SGCE-206ENST00000445866 CCNYL1Q8N7R7 359 aa16.85■□□□□ 0.29
SGCE-206ENST00000445866 OR56A3Q8NH54 315 aa16.85■□□□□ 0.29
SGCE-206ENST00000445866 SREK1Q8WXA9 508 aaKnown RBP16.85■□□□□ 0.29
SGCE-206ENST00000445866 NCSTNQ92542 709 aa16.85■□□□□ 0.29
SGCE-206ENST00000445866 INTS7Q9NVH2 962 aaKnown RBP16.85■□□□□ 0.29
SGCE-206ENST00000445866 SPHK1Q9NYA1 384 aa16.85■□□□□ 0.29
SGCE-206ENST00000445866 SLC22A14Q9Y267 594 aa16.85■□□□□ 0.29
SGCE-206ENST00000445866 TNRC6BQ9UPQ9 1833 aaKnown RBP16.84■□□□□ 0.29
SGCE-206ENST00000445866 GSAPA4D1B5 854 aa16.84■□□□□ 0.29
SGCE-206ENST00000445866 FAM221BA6H8Z2 402 aa16.84■□□□□ 0.29
SGCE-206ENST00000445866 ISM1B1AKI9 464 aa16.84■□□□□ 0.29
SGCE-206ENST00000445866 STX16-NPEPL1H3BU86 382 aa16.84■□□□□ 0.29
SGCE-206ENST00000445866 STX16O14662 325 aa16.84■□□□□ 0.29
SGCE-206ENST00000445866 BIRC5O15392 142 aa16.84■□□□□ 0.29
SGCE-206ENST00000445866 TRIM13O60858 407 aa16.84■□□□□ 0.29
SGCE-206ENST00000445866 DHRS4L1P0CG22 281 aa16.84■□□□□ 0.29
SGCE-206ENST00000445866 EEF1DP29692 281 aaKnown RBP16.84■□□□□ 0.29
SGCE-206ENST00000445866 ATP1A2P50993 1020 aa16.84■□□□□ 0.29
SGCE-206ENST00000445866 EPHA4P54764 986 aa16.84■□□□□ 0.29
SGCE-206ENST00000445866 NAGLUP54802 743 aa16.84■□□□□ 0.29
SGCE-206ENST00000445866 PCLAFQ15004 111 aa16.84■□□□□ 0.29
SGCE-206ENST00000445866 LRRC56Q8IYG6 542 aaPredicted RBP16.84■□□□□ 0.29
SGCE-206ENST00000445866 ARFGAP2Q8N6H7 521 aa16.84■□□□□ 0.29
SGCE-206ENST00000445866 HMGCLL1Q8TB92 370 aa16.84■□□□□ 0.29
SGCE-206ENST00000445866 CCDC3Q9BQI4 270 aa16.84■□□□□ 0.29
SGCE-206ENST00000445866 TMEM79Q9BSE2 394 aa16.84■□□□□ 0.29
SGCE-206ENST00000445866 ACAT2Q9BWD1 397 aa16.84■□□□□ 0.29
SGCE-206ENST00000445866 CCDC177Q9NQR7 707 aaPredicted RBP16.84■□□□□ 0.29
SGCE-206ENST00000445866 ACSS2Q9NR19 701 aa16.84■□□□□ 0.29
SGCE-206ENST00000445866 CABIN1Q9Y6J0 2220 aa16.84■□□□□ 0.29
SGCE-206ENST00000445866 FANCMQ8IYD8 2048 aa16.84■□□□□ 0.29
SGCE-206ENST00000445866 PCDH15Q96QU1 1955 aa16.83■□□□□ 0.28
SGCE-206ENST00000445866 IGHV1OR21-1A0A087WYE8 117 aa16.83■□□□□ 0.28
SGCE-206ENST00000445866 PIPSLA2A3N6 862 aa16.83■□□□□ 0.28
SGCE-206ENST00000445866 OR5K3A6NET4 321 aa16.83■□□□□ 0.28
SGCE-206ENST00000445866 WDR47O94967 919 aa16.83■□□□□ 0.28
SGCE-206ENST00000445866 CHN1P15882 459 aa16.83■□□□□ 0.28
SGCE-206ENST00000445866 CD1CP29017 333 aa16.83■□□□□ 0.28
SGCE-206ENST00000445866 LIMK1P53667 647 aa16.83■□□□□ 0.28
SGCE-206ENST00000445866 DNAJB13P59910 316 aa16.83■□□□□ 0.28
SGCE-206ENST00000445866 HERVK_113P63132 956 aa16.83■□□□□ 0.28
SGCE-206ENST00000445866 NFKB2Q00653 900 aa16.83■□□□□ 0.28
SGCE-206ENST00000445866 ASPHQ12797 758 aa16.83■□□□□ 0.28
SGCE-206ENST00000445866 NR1D2Q14995 579 aa16.83■□□□□ 0.28
SGCE-206ENST00000445866 PCBP2Q15366 365 aaKnown RBP eCLIP16.83■□□□□ 0.28
SGCE-206ENST00000445866 SF1Q15637 639 aaKnown RBP16.83■□□□□ 0.28
SGCE-206ENST00000445866 CFAP157Q5JU67 520 aa16.83■□□□□ 0.28
SGCE-206ENST00000445866 LIPMQ5VYY2 423 aa16.83■□□□□ 0.28
SGCE-206ENST00000445866 SPRED1Q7Z699 444 aa16.83■□□□□ 0.28
SGCE-206ENST00000445866 PIP4P1Q86T03 277 aa16.83■□□□□ 0.28
SGCE-206ENST00000445866 THOC6Q86W42 341 aaKnown RBP16.83■□□□□ 0.28
SGCE-206ENST00000445866 OOSP2Q86WS3 158 aa16.83■□□□□ 0.28
SGCE-206ENST00000445866 PPP4R1Q8TF05 950 aa16.83■□□□□ 0.28
SGCE-206ENST00000445866 RSC1A1Q92681 617 aa16.83■□□□□ 0.28
SGCE-206ENST00000445866 SLC22A18Q96BI1 424 aa16.83■□□□□ 0.28
SGCE-206ENST00000445866 MOCOSQ96EN8 888 aa16.83■□□□□ 0.28
SGCE-206ENST00000445866 SGPP1Q9BX95 441 aa16.83■□□□□ 0.28
SGCE-206ENST00000445866 ERVK-6Q9BXR3 956 aa16.83■□□□□ 0.28
SGCE-206ENST00000445866 INTS9Q9NV88 658 aaKnown RBP16.83■□□□□ 0.28
SGCE-206ENST00000445866 OPTCQ9UBM4 332 aa16.83■□□□□ 0.28
SGCE-206ENST00000445866 ANGPTL3Q9Y5C1 460 aa16.83■□□□□ 0.28
SGCE-206ENST00000445866 K7EPI3 171 aa16.82■□□□□ 0.28
SGCE-206ENST00000445866 TNFSF14O43557 240 aa16.82■□□□□ 0.28
SGCE-206ENST00000445866 SUPT7LO94864 414 aa16.82■□□□□ 0.28
SGCE-206ENST00000445866 NPPBP16860 134 aa16.82■□□□□ 0.28
SGCE-206ENST00000445866 CCND1P24385 295 aa16.82■□□□□ 0.28
SGCE-206ENST00000445866 SLC6A12P48065 614 aa16.82■□□□□ 0.28
SGCE-206ENST00000445866 CCL7P80098 99 aa16.82■□□□□ 0.28
SGCE-206ENST00000445866 GPLD1P80108 840 aa16.82■□□□□ 0.28
SGCE-206ENST00000445866 KIR2DS3Q14952 304 aa16.82■□□□□ 0.28
SGCE-206ENST00000445866 ZNF678Q5SXM1 525 aa16.82■□□□□ 0.28
SGCE-206ENST00000445866 TEX9Q8N6V9 391 aa16.82■□□□□ 0.28
SGCE-206ENST00000445866 SNX31Q8N9S9 440 aa16.82■□□□□ 0.28
SGCE-206ENST00000445866 PPP1R14CQ8TAE6 165 aa16.82■□□□□ 0.28
SGCE-206ENST00000445866 FAM76AQ8TAV0 307 aa16.82■□□□□ 0.28
SGCE-206ENST00000445866 MIPEPQ99797 713 aa16.82■□□□□ 0.28
SGCE-206ENST00000445866 PCBD2Q9H0N5 130 aa16.82■□□□□ 0.28
SGCE-206ENST00000445866 ABCG4Q9H172 646 aa16.82■□□□□ 0.28
SGCE-206ENST00000445866 EPB41L1Q9H4G0 881 aa16.82■□□□□ 0.28
SGCE-206ENST00000445866 SLC32A1Q9H598 525 aa16.82■□□□□ 0.28
SGCE-206ENST00000445866 DNAJC11Q9NVH1 559 aa16.82■□□□□ 0.28
SGCE-206ENST00000445866 ACTR10Q9NZ32 417 aa16.82■□□□□ 0.28
SGCE-206ENST00000445866 OGFRQ9NZT2 677 aa16.82■□□□□ 0.28
SGCE-206ENST00000445866 ASB1Q9Y576 335 aa16.82■□□□□ 0.28
SGCE-206ENST00000445866 PCDHB11Q9Y5F2 797 aa16.82■□□□□ 0.28
SGCE-206ENST00000445866 ENTPD2Q9Y5L3 495 aa16.82■□□□□ 0.28
SGCE-206ENST00000445866 PI4KAP42356 2102 aa16.82■□□□□ 0.28
SGCE-206ENST00000445866 A0A1W2PPV9 198 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms