RNA–Protein interactions for RNA: ENST00000442830.5

PTPRE-203, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-203ENST00000442830 TFR2Q9UP52 801 aa13.26□□□□□ -0.29
PTPRE-203ENST00000442830 SVILO95425 2214 aa13.25□□□□□ -0.29
PTPRE-203ENST00000442830 ZGRF1Q86YA3 2104 aa13.25□□□□□ -0.29
PTPRE-203ENST00000442830 PCSK5Q92824 1860 aa13.25□□□□□ -0.29
PTPRE-203ENST00000442830 ITPR2Q14571 2701 aa13.25□□□□□ -0.29
PTPRE-203ENST00000442830 RCCD1A6NED2 376 aa13.25□□□□□ -0.29
PTPRE-203ENST00000442830 PRMT5O14744 637 aaPredicted RBP13.25□□□□□ -0.29
PTPRE-203ENST00000442830 RASGRF2O14827 1237 aa13.25□□□□□ -0.29
PTPRE-203ENST00000442830 PFDN6O15212 129 aa13.25□□□□□ -0.29
PTPRE-203ENST00000442830 PHF2O75151 1096 aa13.25□□□□□ -0.29
PTPRE-203ENST00000442830 GPC4O75487 556 aa13.25□□□□□ -0.29
PTPRE-203ENST00000442830 SLCO2B1O94956 709 aa13.25□□□□□ -0.29
PTPRE-203ENST00000442830 GOT2P00505 430 aaKnown RBP13.25□□□□□ -0.29
PTPRE-203ENST00000442830 CCNFP41002 786 aa13.25□□□□□ -0.29
PTPRE-203ENST00000442830 TSFMP43897 325 aaKnown RBP13.25□□□□□ -0.29
PTPRE-203ENST00000442830 GLRBP48167 497 aa13.25□□□□□ -0.29
PTPRE-203ENST00000442830 HSPA14Q0VDF9 509 aa13.25□□□□□ -0.29
PTPRE-203ENST00000442830 TUBB8Q3ZCM7 444 aa13.25□□□□□ -0.29
PTPRE-203ENST00000442830 SEL1L2Q5TEA6 688 aa13.25□□□□□ -0.29
PTPRE-203ENST00000442830 PRMT9Q6P2P2 845 aa13.25□□□□□ -0.29
PTPRE-203ENST00000442830 FIGLAQ6QHK4 219 aa13.25□□□□□ -0.29
PTPRE-203ENST00000442830 IGFL2Q6UWQ7 119 aa13.25□□□□□ -0.29
PTPRE-203ENST00000442830 C4orf22Q6V702 233 aa13.25□□□□□ -0.29
PTPRE-203ENST00000442830 TTLL10Q6ZVT0 673 aa13.25□□□□□ -0.29
PTPRE-203ENST00000442830 PPHLN1Q8NEY8 458 aaKnown RBP13.25□□□□□ -0.29
PTPRE-203ENST00000442830 OR52K1Q8NGK4 314 aa13.25□□□□□ -0.29
PTPRE-203ENST00000442830 OR6P1Q8NGX9 317 aa13.25□□□□□ -0.29
PTPRE-203ENST00000442830 RAD51AP1Q96B01 352 aa13.25□□□□□ -0.29
PTPRE-203ENST00000442830 SELENOSQ9BQE4 189 aa13.25□□□□□ -0.29
PTPRE-203ENST00000442830 LHPPQ9H008 270 aa13.25□□□□□ -0.29
PTPRE-203ENST00000442830 CUTCQ9NTM9 273 aa13.25□□□□□ -0.29
PTPRE-203ENST00000442830 IMPACTQ9P2X3 320 aa13.25□□□□□ -0.29
PTPRE-203ENST00000442830 GNPTGQ9UJJ9 305 aa13.25□□□□□ -0.29
PTPRE-203ENST00000442830 ERRFI1Q9UJM3 462 aaPredicted RBP13.25□□□□□ -0.29
PTPRE-203ENST00000442830 KLK4Q9Y5K2 254 aa13.25□□□□□ -0.29
PTPRE-203ENST00000442830 DUSP10Q9Y6W6 482 aa13.25□□□□□ -0.29
PTPRE-203ENST00000442830 FITM1A5D6W6 292 aa13.24□□□□□ -0.29
PTPRE-203ENST00000442830 PRPF4O43172 522 aaKnown RBP eCLIP13.24□□□□□ -0.29
PTPRE-203ENST00000442830 FDXRP22570 491 aa13.24□□□□□ -0.29
PTPRE-203ENST00000442830 PEBP1P30086 187 aaKnown RBP13.24□□□□□ -0.29
PTPRE-203ENST00000442830 CCR7P32248 378 aa13.24□□□□□ -0.29
PTPRE-203ENST00000442830 GDF10P55107 478 aa13.24□□□□□ -0.29
PTPRE-203ENST00000442830 AP2B1P63010 937 aa13.24□□□□□ -0.29
PTPRE-203ENST00000442830 TLR1Q15399 786 aa13.24□□□□□ -0.29
PTPRE-203ENST00000442830 SF1Q15637 639 aaKnown RBP13.24□□□□□ -0.29
PTPRE-203ENST00000442830 RBBP7Q16576 425 aa13.24□□□□□ -0.29
PTPRE-203ENST00000442830 NKG7Q16617 165 aa13.24□□□□□ -0.29
PTPRE-203ENST00000442830 CCDC38Q502W7 563 aa13.24□□□□□ -0.29
PTPRE-203ENST00000442830 CRB2Q5IJ48 1285 aa13.24□□□□□ -0.29
PTPRE-203ENST00000442830 AADACL2Q6P093 401 aa13.24□□□□□ -0.29
PTPRE-203ENST00000442830 C19orf60Q96EN9 201 aa13.24□□□□□ -0.29
PTPRE-203ENST00000442830 ZNF285Q96NJ3 590 aa13.24□□□□□ -0.29
PTPRE-203ENST00000442830 SLC6A20Q9NP91 592 aa13.24□□□□□ -0.29
PTPRE-203ENST00000442830 CATSPERZQ9NTU4 200 aa13.24□□□□□ -0.29
PTPRE-203ENST00000442830 PLAGL1Q9UM63 463 aa13.24□□□□□ -0.29
PTPRE-203ENST00000442830 TCAF1Q9Y4C2 921 aa13.24□□□□□ -0.29
PTPRE-203ENST00000442830 A1L4Q6 167 aa13.23□□□□□ -0.29
PTPRE-203ENST00000442830 OR51F1A6NGY5 319 aa13.23□□□□□ -0.29
PTPRE-203ENST00000442830 HCRTR1O43613 425 aa13.23□□□□□ -0.29
PTPRE-203ENST00000442830 KRT86O43790 486 aa13.23□□□□□ -0.29
PTPRE-203ENST00000442830 OR1I1O60431 355 aa13.23□□□□□ -0.29
PTPRE-203ENST00000442830 CNOT3O75175 753 aaKnown RBP13.23□□□□□ -0.29
PTPRE-203ENST00000442830 TPBGLP0DKB5 382 aa13.23□□□□□ -0.29
PTPRE-203ENST00000442830 EDN3P14138 238 aa13.23□□□□□ -0.29
PTPRE-203ENST00000442830 AOAHP28039 575 aa13.23□□□□□ -0.29
PTPRE-203ENST00000442830 EMP3P54852 163 aa13.23□□□□□ -0.29
PTPRE-203ENST00000442830 OCA2Q04671 838 aa13.23□□□□□ -0.29
PTPRE-203ENST00000442830 ZNF169Q14929 603 aaPredicted RBP13.23□□□□□ -0.29
PTPRE-203ENST00000442830 SLC9A5Q14940 896 aa13.23□□□□□ -0.29
PTPRE-203ENST00000442830 INAQ16352 499 aa13.23□□□□□ -0.29
PTPRE-203ENST00000442830 ARMC3Q5W041 872 aa13.23□□□□□ -0.29
PTPRE-203ENST00000442830 PTRHD1Q6GMV3 140 aaKnown RBP13.23□□□□□ -0.29
PTPRE-203ENST00000442830 RPUSD3Q6P087 351 aaKnown RBP13.23□□□□□ -0.29
PTPRE-203ENST00000442830 CUZD1Q86UP6 607 aa13.23□□□□□ -0.29
PTPRE-203ENST00000442830 CCDC89Q8N998 374 aa13.23□□□□□ -0.29
PTPRE-203ENST00000442830 LMNTD1Q8N9Z9 388 aa13.23□□□□□ -0.29
PTPRE-203ENST00000442830 LINC01555Q8NAE3 123 aa13.23□□□□□ -0.29
PTPRE-203ENST00000442830 HMGCLL1Q8TB92 370 aa13.23□□□□□ -0.29
PTPRE-203ENST00000442830 HES6Q96HZ4 224 aa13.23□□□□□ -0.29
PTPRE-203ENST00000442830 LMF1Q96S06 567 aa13.23□□□□□ -0.29
PTPRE-203ENST00000442830 SPSB2Q99619 263 aa13.23□□□□□ -0.29
PTPRE-203ENST00000442830 NRTNQ99748 197 aa13.23□□□□□ -0.29
PTPRE-203ENST00000442830 MENTQ9BUN1 341 aa13.23□□□□□ -0.29
PTPRE-203ENST00000442830 LACRTQ9GZZ8 138 aa13.23□□□□□ -0.29
PTPRE-203ENST00000442830 PIH1D1Q9NWS0 290 aaKnown RBP13.23□□□□□ -0.29
PTPRE-203ENST00000442830 UTP6Q9NYH9 597 aaKnown RBP13.23□□□□□ -0.29
PTPRE-203ENST00000442830 SPATA7Q9P0W8 599 aa13.23□□□□□ -0.29
PTPRE-203ENST00000442830 PAK5Q9P286 719 aa13.23□□□□□ -0.29
PTPRE-203ENST00000442830 NOVA2Q9UNW9 492 aaKnown RBP13.23□□□□□ -0.29
PTPRE-203ENST00000442830 H3BMM5 538 aa13.22□□□□□ -0.29
PTPRE-203ENST00000442830 SOCS6O14544 535 aa13.22□□□□□ -0.29
PTPRE-203ENST00000442830 LIASO43766 372 aa13.22□□□□□ -0.29
PTPRE-203ENST00000442830 USP1O94782 785 aa13.22□□□□□ -0.29
PTPRE-203ENST00000442830 HPP00738 406 aa13.22□□□□□ -0.29
PTPRE-203ENST00000442830 ERVK-10P10266 1014 aa13.22□□□□□ -0.29
PTPRE-203ENST00000442830 RPS3P23396 243 aaKnown RBP eCLIP13.22□□□□□ -0.29
PTPRE-203ENST00000442830 CSE1LP55060 971 aaKnown RBP13.22□□□□□ -0.29
PTPRE-203ENST00000442830 OASLQ15646 514 aaKnown RBP13.22□□□□□ -0.29
PTPRE-203ENST00000442830 MUM1Q2TAK8 710 aa13.22□□□□□ -0.29
PTPRE-203ENST00000442830 PCID2Q5JVF3 399 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms