RNA–Protein interactions for RNA: ENST00000431120.1

GCSHP3-201, Transcript of glycine cleavage system protein H pseudogene 3, humanhuman

BASIC

Gene GCSHP3, Length 391 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCSHP3-201ENST00000431120 KLK4Q9Y5K2 254 aa13.01□□□□□ -0.33
GCSHP3-201ENST00000431120 SNRNP200O75643 2136 aaKnown RBP13□□□□□ -0.33
GCSHP3-201ENST00000431120 PCM1Q15154 2024 aa13□□□□□ -0.33
GCSHP3-201ENST00000431120 CCDC88CQ9P219 2028 aa13□□□□□ -0.33
GCSHP3-201ENST00000431120 PCSK5Q92824 1860 aa13□□□□□ -0.33
GCSHP3-201ENST00000431120 FITM1A5D6W6 292 aa13□□□□□ -0.33
GCSHP3-201ENST00000431120 ANKUB1A6NFN9 424 aa13□□□□□ -0.33
GCSHP3-201ENST00000431120 AP3B1O00203 1094 aa13□□□□□ -0.33
GCSHP3-201ENST00000431120 RASGRF2O14827 1237 aa13□□□□□ -0.33
GCSHP3-201ENST00000431120 DSCR3O14972 297 aa13□□□□□ -0.33
GCSHP3-201ENST00000431120 LIASO43766 372 aa13□□□□□ -0.33
GCSHP3-201ENST00000431120 KRT86O43790 486 aa13□□□□□ -0.33
GCSHP3-201ENST00000431120 LDLRP01130 860 aa13□□□□□ -0.33
GCSHP3-201ENST00000431120 ITGA3P26006 1051 aa13□□□□□ -0.33
GCSHP3-201ENST00000431120 AOAHP28039 575 aa13□□□□□ -0.33
GCSHP3-201ENST00000431120 GRB7Q14451 532 aa13□□□□□ -0.33
GCSHP3-201ENST00000431120 SF1Q15637 639 aaKnown RBP13□□□□□ -0.33
GCSHP3-201ENST00000431120 AGAP7PQ5VUJ5 663 aa13□□□□□ -0.33
GCSHP3-201ENST00000431120 PRAMEF13Q5VWM6 474 aa13□□□□□ -0.33
GCSHP3-201ENST00000431120 FIGLAQ6QHK4 219 aa13□□□□□ -0.33
GCSHP3-201ENST00000431120 NAPRTQ6XQN6 538 aa13□□□□□ -0.33
GCSHP3-201ENST00000431120 RNF10Q8N5U6 811 aaKnown RBP13□□□□□ -0.33
GCSHP3-201ENST00000431120 TTC29Q8NA56 475 aaPredicted RBP13□□□□□ -0.33
GCSHP3-201ENST00000431120 GSDMBQ8TAX9 411 aa13□□□□□ -0.33
GCSHP3-201ENST00000431120 HMGCLL1Q8TB92 370 aa13□□□□□ -0.33
GCSHP3-201ENST00000431120 RAD51AP1Q96B01 352 aa13□□□□□ -0.33
GCSHP3-201ENST00000431120 C5orf34Q96MH7 638 aa13□□□□□ -0.33
GCSHP3-201ENST00000431120 AGAP4Q96P64 663 aa13□□□□□ -0.33
GCSHP3-201ENST00000431120 BAG1Q99933 345 aaPredicted RBP13□□□□□ -0.33
GCSHP3-201ENST00000431120 WDR77Q9BQA1 342 aaPredicted RBP13□□□□□ -0.33
GCSHP3-201ENST00000431120 SEMA3GQ9NS98 782 aa13□□□□□ -0.33
GCSHP3-201ENST00000431120 CUTCQ9NTM9 273 aa13□□□□□ -0.33
GCSHP3-201ENST00000431120 SLC2A6Q9UGQ3 507 aa13□□□□□ -0.33
GCSHP3-201ENST00000431120 ERRFI1Q9UJM3 462 aaPredicted RBP13□□□□□ -0.33
GCSHP3-201ENST00000431120 PACSIN2Q9UNF0 486 aaPredicted RBP13□□□□□ -0.33
GCSHP3-201ENST00000431120 TCAF1Q9Y4C2 921 aa13□□□□□ -0.33
GCSHP3-201ENST00000431120 PCDHGA10Q9Y5H3 936 aa13□□□□□ -0.33
GCSHP3-201ENST00000431120 ITPR2Q14571 2701 aa13□□□□□ -0.33
GCSHP3-201ENST00000431120 TCRBV7S2A1N4TA0A589 114 aa12.99□□□□□ -0.33
GCSHP3-201ENST00000431120 PRICKLE3O43900 615 aaPredicted RBP12.99□□□□□ -0.33
GCSHP3-201ENST00000431120 FTCDO95954 541 aa12.99□□□□□ -0.33
GCSHP3-201ENST00000431120 CTSBP07858 339 aa12.99□□□□□ -0.33
GCSHP3-201ENST00000431120 CCNFP41002 786 aa12.99□□□□□ -0.33
GCSHP3-201ENST00000431120 SLC9A5Q14940 896 aa12.99□□□□□ -0.33
GCSHP3-201ENST00000431120 NKG7Q16617 165 aa12.99□□□□□ -0.33
GCSHP3-201ENST00000431120 PCID2Q5JVF3 399 aa12.99□□□□□ -0.33
GCSHP3-201ENST00000431120 SEL1L2Q5TEA6 688 aa12.99□□□□□ -0.33
GCSHP3-201ENST00000431120 B3GNTL1Q67FW5 361 aaPredicted RBP12.99□□□□□ -0.33
GCSHP3-201ENST00000431120 PRMT9Q6P2P2 845 aa12.99□□□□□ -0.33
GCSHP3-201ENST00000431120 C4orf22Q6V702 233 aa12.99□□□□□ -0.33
GCSHP3-201ENST00000431120 MICALCLQ6ZW33 695 aa12.99□□□□□ -0.33
GCSHP3-201ENST00000431120 VRK3Q8IV63 474 aa12.99□□□□□ -0.33
GCSHP3-201ENST00000431120 LMNTD1Q8N9Z9 388 aa12.99□□□□□ -0.33
GCSHP3-201ENST00000431120 ST6GALNAC3Q8NDV1 305 aa12.99□□□□□ -0.33
GCSHP3-201ENST00000431120 PPHLN1Q8NEY8 458 aaKnown RBP12.99□□□□□ -0.33
GCSHP3-201ENST00000431120 MAGEC3Q8TD91 643 aa12.99□□□□□ -0.33
GCSHP3-201ENST00000431120 SPSB2Q99619 263 aa12.99□□□□□ -0.33
GCSHP3-201ENST00000431120 SELENOSQ9BQE4 189 aa12.99□□□□□ -0.33
GCSHP3-201ENST00000431120 SLC6A20Q9NP91 592 aa12.99□□□□□ -0.33
GCSHP3-201ENST00000431120 RAB6BQ9NRW1 208 aa12.99□□□□□ -0.33
GCSHP3-201ENST00000431120 CATSPERZQ9NTU4 200 aa12.99□□□□□ -0.33
GCSHP3-201ENST00000431120 PAK5Q9P286 719 aa12.99□□□□□ -0.33
GCSHP3-201ENST00000431120 GNPTGQ9UJJ9 305 aa12.99□□□□□ -0.33
GCSHP3-201ENST00000431120 CDC23Q9UJX2 597 aa12.99□□□□□ -0.33
GCSHP3-201ENST00000431120 FBXL4Q9UKA2 621 aa12.99□□□□□ -0.33
GCSHP3-201ENST00000431120 ZNF148Q9UQR1 794 aa12.99□□□□□ -0.33
GCSHP3-201ENST00000431120 VSTM2BA6NLU5 285 aa12.98□□□□□ -0.33
GCSHP3-201ENST00000431120 IFNB1P01574 187 aa12.98□□□□□ -0.33
GCSHP3-201ENST00000431120 APRTP07741 180 aa12.98□□□□□ -0.33
GCSHP3-201ENST00000431120 RNF224P0DH78 156 aa12.98□□□□□ -0.33
GCSHP3-201ENST00000431120 RPS3P23396 243 aaKnown RBP eCLIP12.98□□□□□ -0.33
GCSHP3-201ENST00000431120 TSFMP43897 325 aaKnown RBP12.98□□□□□ -0.33
GCSHP3-201ENST00000431120 GLRBP48167 497 aa12.98□□□□□ -0.33
GCSHP3-201ENST00000431120 CARSP49589 748 aaKnown RBP12.98□□□□□ -0.33
GCSHP3-201ENST00000431120 CSE1LP55060 971 aaKnown RBP12.98□□□□□ -0.33
GCSHP3-201ENST00000431120 TUBB8Q3ZCM7 444 aa12.98□□□□□ -0.33
GCSHP3-201ENST00000431120 FCRL6Q6DN72 434 aa12.98□□□□□ -0.33
GCSHP3-201ENST00000431120 PTRHD1Q6GMV3 140 aaKnown RBP12.98□□□□□ -0.33
GCSHP3-201ENST00000431120 KIRREL2Q6UWL6 708 aa12.98□□□□□ -0.33
GCSHP3-201ENST00000431120 CUZD1Q86UP6 607 aa12.98□□□□□ -0.33
GCSHP3-201ENST00000431120 TAB3Q8N5C8 712 aaPredicted RBP12.98□□□□□ -0.33
GCSHP3-201ENST00000431120 CFAP61Q8NHU2 1237 aa12.98□□□□□ -0.33
GCSHP3-201ENST00000431120 ATG4AQ8WYN0 398 aa12.98□□□□□ -0.33
GCSHP3-201ENST00000431120 INPP5DQ92835 1189 aa12.98□□□□□ -0.33
GCSHP3-201ENST00000431120 ZNF778Q96MU6 729 aa12.98□□□□□ -0.33
GCSHP3-201ENST00000431120 FOPNLQ96NB1 174 aa12.98□□□□□ -0.33
GCSHP3-201ENST00000431120 IL22Q9GZX6 179 aa12.98□□□□□ -0.33
GCSHP3-201ENST00000431120 LHPPQ9H008 270 aa12.98□□□□□ -0.33
GCSHP3-201ENST00000431120 EPS8L2Q9H6S3 715 aa12.98□□□□□ -0.33
GCSHP3-201ENST00000431120 EIF2B3Q9NR50 452 aaKnown RBP12.98□□□□□ -0.33
GCSHP3-201ENST00000431120 HS3ST3B1Q9Y662 390 aa12.98□□□□□ -0.33
GCSHP3-201ENST00000431120 FAM169AQ9Y6X4 670 aa12.98□□□□□ -0.33
GCSHP3-201ENST00000431120 CACNA1DQ01668 2161 aa12.98□□□□□ -0.33
GCSHP3-201ENST00000431120 SOCS6O14544 535 aa12.97□□□□□ -0.33
GCSHP3-201ENST00000431120 PCDH17O14917 1159 aa12.97□□□□□ -0.33
GCSHP3-201ENST00000431120 PFDN6O15212 129 aa12.97□□□□□ -0.33
GCSHP3-201ENST00000431120 CD3EAPO15446 510 aaKnown RBP12.97□□□□□ -0.33
GCSHP3-201ENST00000431120 PHF2O75151 1096 aa12.97□□□□□ -0.33
GCSHP3-201ENST00000431120 GRIA1P42261 906 aa12.97□□□□□ -0.33
GCSHP3-201ENST00000431120 GRIA3P42263 894 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms