RNA–Protein interactions for RNA: ENST00000427299.6

LINC00458-202, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,030 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-202ENST00000427299 CNGA3Q16281 694 aa4.99□□□□□ -1.61
LINC00458-202ENST00000427299 SHROOM1Q2M3G4 852 aaPredicted RBP4.99□□□□□ -1.61
LINC00458-202ENST00000427299 DNAL1Q4LDG9 190 aa4.99□□□□□ -1.61
LINC00458-202ENST00000427299 XKR3Q5GH77 459 aa4.99□□□□□ -1.61
LINC00458-202ENST00000427299 C9orf50Q5SZB4 431 aa4.99□□□□□ -1.61
LINC00458-202ENST00000427299 RNASEH2BQ5TBB1 312 aaKnown RBP4.99□□□□□ -1.61
LINC00458-202ENST00000427299 LGSNQ5TDP6 509 aa4.99□□□□□ -1.61
LINC00458-202ENST00000427299 ATG16L1Q676U5 607 aa4.99□□□□□ -1.61
LINC00458-202ENST00000427299 PLA2G4FQ68DD2 849 aa4.99□□□□□ -1.61
LINC00458-202ENST00000427299 DENND1BQ6P3S1 775 aa4.99□□□□□ -1.61
LINC00458-202ENST00000427299 TMEM270Q6UE05 265 aa4.99□□□□□ -1.61
LINC00458-202ENST00000427299 C4orf22Q6V702 233 aa4.99□□□□□ -1.61
LINC00458-202ENST00000427299 FAM47EQ6ZV65 393 aa4.99□□□□□ -1.61
LINC00458-202ENST00000427299 BZW1Q7L1Q6 419 aaKnown RBP4.99□□□□□ -1.61
LINC00458-202ENST00000427299 NLRP9Q7RTR0 991 aa4.99□□□□□ -1.61
LINC00458-202ENST00000427299 ECHDC2Q86YB7 292 aa4.99□□□□□ -1.61
LINC00458-202ENST00000427299 ZBTB8OSQ8IWT0 167 aa4.99□□□□□ -1.61
LINC00458-202ENST00000427299 THNSL1Q8IYQ7 743 aa4.99□□□□□ -1.61
LINC00458-202ENST00000427299 ZBED8Q8IZ13 594 aa4.99□□□□□ -1.61
LINC00458-202ENST00000427299 PDIK1LQ8N165 341 aa4.99□□□□□ -1.61
LINC00458-202ENST00000427299 SRFBP1Q8NEF9 429 aaKnown RBP4.99□□□□□ -1.61
LINC00458-202ENST00000427299 ACER1Q8TDN7 264 aa4.99□□□□□ -1.61
LINC00458-202ENST00000427299 C10orf82Q8WW14 230 aa4.99□□□□□ -1.61
LINC00458-202ENST00000427299 PRCCQ92733 491 aaPredicted RBP4.99□□□□□ -1.61
LINC00458-202ENST00000427299 SEMA4DQ92854 862 aa4.99□□□□□ -1.61
LINC00458-202ENST00000427299 NEUROG1Q92886 237 aa4.99□□□□□ -1.61
LINC00458-202ENST00000427299 MCUR1Q96AQ8 359 aa4.99□□□□□ -1.61
LINC00458-202ENST00000427299 MTBPQ96DY7 904 aa4.99□□□□□ -1.61
LINC00458-202ENST00000427299 C9orf72Q96LT7 481 aa4.99□□□□□ -1.61
LINC00458-202ENST00000427299 CYTH2Q99418 400 aa4.99□□□□□ -1.61
LINC00458-202ENST00000427299 PAIP2Q9BPZ3 127 aaKnown RBP4.99□□□□□ -1.61
LINC00458-202ENST00000427299 FAM213AQ9BRX8 229 aa4.99□□□□□ -1.61
LINC00458-202ENST00000427299 MSTO1Q9BUK6 570 aa4.99□□□□□ -1.61
LINC00458-202ENST00000427299 TSSK1BQ9BXA7 367 aa4.99□□□□□ -1.61
LINC00458-202ENST00000427299 RBM38Q9H0Z9 239 aaKnown RBP4.99□□□□□ -1.61
LINC00458-202ENST00000427299 C2orf40Q9H1Z8 148 aa4.99□□□□□ -1.61
LINC00458-202ENST00000427299 STN1Q9H668 368 aaKnown RBP4.99□□□□□ -1.61
LINC00458-202ENST00000427299 DCLRE1BQ9H816 532 aa4.99□□□□□ -1.61
LINC00458-202ENST00000427299 FZD3Q9NPG1 666 aa4.99□□□□□ -1.61
LINC00458-202ENST00000427299 RNF146Q9NTX7 359 aa4.99□□□□□ -1.61
LINC00458-202ENST00000427299 SLC9A2Q9UBY0 812 aa4.99□□□□□ -1.61
LINC00458-202ENST00000427299 CD207Q9UJ71 328 aa4.99□□□□□ -1.61
LINC00458-202ENST00000427299 CORO1CQ9ULV4 474 aaPredicted RBP4.99□□□□□ -1.61
LINC00458-202ENST00000427299 NAALADL1Q9UQQ1 740 aa4.99□□□□□ -1.61
LINC00458-202ENST00000427299 STYXL1Q9Y6J8 313 aa4.99□□□□□ -1.61
LINC00458-202ENST00000427299 CNTNAP1P78357 1384 aa4.99□□□□□ -1.61
LINC00458-202ENST00000427299 PLXNB2O15031 1838 aa4.99□□□□□ -1.61
LINC00458-202ENST00000427299 EP400Q96L91 3159 aa4.99□□□□□ -1.61
LINC00458-202ENST00000427299 MIA3Q5JRA6 1907 aa4.98□□□□□ -1.61
LINC00458-202ENST00000427299 KIR2DS5A0A0G2JLQ3 304 aa4.98□□□□□ -1.61
LINC00458-202ENST00000427299 LRRIQ4A6NIV6 560 aa4.98□□□□□ -1.61
LINC00458-202ENST00000427299 E7ESA3 106 aa4.98□□□□□ -1.61
LINC00458-202ENST00000427299 APOC4-APOC2K7ER74 178 aa4.98□□□□□ -1.61
LINC00458-202ENST00000427299 KIR2DS3K7RE56 304 aa4.98□□□□□ -1.61
LINC00458-202ENST00000427299 ACOT8O14734 319 aa4.98□□□□□ -1.61
LINC00458-202ENST00000427299 KLF11O14901 512 aa4.98□□□□□ -1.61
LINC00458-202ENST00000427299 CLGNO14967 610 aa4.98□□□□□ -1.61
LINC00458-202ENST00000427299 CHADO15335 359 aa4.98□□□□□ -1.61
LINC00458-202ENST00000427299 AHCYL1O43865 530 aa4.98□□□□□ -1.61
LINC00458-202ENST00000427299 TYROBPO43914 113 aa4.98□□□□□ -1.61
LINC00458-202ENST00000427299 PLOD3O60568 738 aa4.98□□□□□ -1.61
LINC00458-202ENST00000427299 TMEM63AO94886 807 aa4.98□□□□□ -1.61
LINC00458-202ENST00000427299 GH1P01241 217 aa4.98□□□□□ -1.61
LINC00458-202ENST00000427299 TNNC2P02585 160 aa4.98□□□□□ -1.61
LINC00458-202ENST00000427299 APOC2P02655 101 aa4.98□□□□□ -1.61
LINC00458-202ENST00000427299 WEE2P0C1S8 567 aa4.98□□□□□ -1.61
LINC00458-202ENST00000427299 SUPT20HL2P0C7V6 817 aa4.98□□□□□ -1.61
LINC00458-202ENST00000427299 GLRA2P23416 452 aa4.98□□□□□ -1.61
LINC00458-202ENST00000427299 HOXA11P31270 313 aaPredicted RBP4.98□□□□□ -1.61
LINC00458-202ENST00000427299 PCK1P35558 622 aa4.98□□□□□ -1.61
LINC00458-202ENST00000427299 CTCFP49711 727 aaPredicted RBP4.98□□□□□ -1.61
LINC00458-202ENST00000427299 RAD23BP54727 409 aa4.98□□□□□ -1.61
LINC00458-202ENST00000427299 IRX4P78413 519 aa4.98□□□□□ -1.61
LINC00458-202ENST00000427299 CDK16Q00536 496 aa4.98□□□□□ -1.61
LINC00458-202ENST00000427299 ROR1Q01973 937 aa4.98□□□□□ -1.61
LINC00458-202ENST00000427299 ZBTB16Q05516 673 aa4.98□□□□□ -1.61
LINC00458-202ENST00000427299 LTBQ06643 244 aa4.98□□□□□ -1.61
LINC00458-202ENST00000427299 KLC1Q07866 573 aa4.98□□□□□ -1.61
LINC00458-202ENST00000427299 PDIA2Q13087 525 aaKnown RBP4.98□□□□□ -1.61
LINC00458-202ENST00000427299 NAB1Q13506 487 aa4.98□□□□□ -1.61
LINC00458-202ENST00000427299 TFDP2Q14188 446 aa4.98□□□□□ -1.61
LINC00458-202ENST00000427299 TRIP13Q15645 432 aaPredicted RBP4.98□□□□□ -1.61
LINC00458-202ENST00000427299 OASLQ15646 514 aaKnown RBP4.98□□□□□ -1.61
LINC00458-202ENST00000427299 UGCGQ16739 394 aa4.98□□□□□ -1.61
LINC00458-202ENST00000427299 TSTQ16762 297 aaKnown RBP4.98□□□□□ -1.61
LINC00458-202ENST00000427299 GSTA3Q16772 222 aa4.98□□□□□ -1.61
LINC00458-202ENST00000427299 KYAT1Q16773 422 aa4.98□□□□□ -1.61
LINC00458-202ENST00000427299 SGSM1Q2NKQ1 1148 aa4.98□□□□□ -1.61
LINC00458-202ENST00000427299 C1QTNF12Q5T7M4 302 aa4.98□□□□□ -1.61
LINC00458-202ENST00000427299 CGB2Q6NT52 195 aa4.98□□□□□ -1.61
LINC00458-202ENST00000427299 IRGCQ6NXR0 463 aa4.98□□□□□ -1.61
LINC00458-202ENST00000427299 SLC39A4Q6P5W5 647 aa4.98□□□□□ -1.61
LINC00458-202ENST00000427299 GSG1LQ6UXU4 331 aa4.98□□□□□ -1.61
LINC00458-202ENST00000427299 ANO5Q75V66 913 aa4.98□□□□□ -1.61
LINC00458-202ENST00000427299 RTL10Q7L3V2 364 aa4.98□□□□□ -1.61
LINC00458-202ENST00000427299 ERICH1Q86X53 443 aa4.98□□□□□ -1.61
LINC00458-202ENST00000427299 UEVLDQ8IX04 471 aa4.98□□□□□ -1.61
LINC00458-202ENST00000427299 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.98□□□□□ -1.61
LINC00458-202ENST00000427299 PYROXD1Q8WU10 500 aa4.98□□□□□ -1.61
LINC00458-202ENST00000427299 NUDCD2Q8WVJ2 157 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms