RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 PTPN4P29074 926 aa10.79□□□□□ -0.68
RFFL-204ENST00000414419 CBSP35520 551 aa10.79□□□□□ -0.68
RFFL-204ENST00000414419 SKIV2L2P42285 1042 aaKnown RBP10.79□□□□□ -0.68
RFFL-204ENST00000414419 CARSP49589 748 aaKnown RBP10.79□□□□□ -0.68
RFFL-204ENST00000414419 POLE2P56282 527 aa10.79□□□□□ -0.68
RFFL-204ENST00000414419 ETF1P62495 437 aaKnown RBP10.79□□□□□ -0.68
RFFL-204ENST00000414419 CALCOCO2Q13137 446 aa10.79□□□□□ -0.68
RFFL-204ENST00000414419 TSTA3Q13630 321 aaPredicted RBP10.79□□□□□ -0.68
RFFL-204ENST00000414419 COL9A2Q14055 689 aaPredicted RBP10.79□□□□□ -0.68
RFFL-204ENST00000414419 GBX1Q14549 363 aa10.79□□□□□ -0.68
RFFL-204ENST00000414419 NAA25Q14CX7 972 aa10.79□□□□□ -0.68
RFFL-204ENST00000414419 ZIC1Q15915 447 aa10.79□□□□□ -0.68
RFFL-204ENST00000414419 CCSMST1Q4G0I0 132 aa10.79□□□□□ -0.68
RFFL-204ENST00000414419 ZC3H12BQ5HYM0 836 aaKnown RBP10.79□□□□□ -0.68
RFFL-204ENST00000414419 LRRC8EQ6NSJ5 796 aa10.79□□□□□ -0.68
RFFL-204ENST00000414419 ZNF549Q6P9A3 640 aa10.79□□□□□ -0.68
RFFL-204ENST00000414419 TLDC1Q6P9B6 456 aa10.79□□□□□ -0.68
RFFL-204ENST00000414419 FIGLAQ6QHK4 219 aa10.79□□□□□ -0.68
RFFL-204ENST00000414419 SYT10Q6XYQ8 523 aa10.79□□□□□ -0.68
RFFL-204ENST00000414419 KIAA0408Q6ZU52 694 aa10.79□□□□□ -0.68
RFFL-204ENST00000414419 ZNF605Q86T29 641 aa10.79□□□□□ -0.68
RFFL-204ENST00000414419 SYVN1Q86TM6 617 aa10.79□□□□□ -0.68
RFFL-204ENST00000414419 FAM20CQ8IXL6 584 aa10.79□□□□□ -0.68
RFFL-204ENST00000414419 PALM2Q8IXS6 379 aa10.79□□□□□ -0.68
RFFL-204ENST00000414419 SYTL1Q8IYJ3 562 aa10.79□□□□□ -0.68
RFFL-204ENST00000414419 LMNTD1Q8N9Z9 388 aa10.79□□□□□ -0.68
RFFL-204ENST00000414419 SLC38A9Q8NBW4 561 aa10.79□□□□□ -0.68
RFFL-204ENST00000414419 C2CD4AQ8NCU7 369 aaPredicted RBP10.79□□□□□ -0.68
RFFL-204ENST00000414419 HMGCLL1Q8TB92 370 aa10.79□□□□□ -0.68
RFFL-204ENST00000414419 APOBEC4Q8WW27 367 aaKnown RBP10.79□□□□□ -0.68
RFFL-204ENST00000414419 ZUFSPQ96AP4 578 aa10.79□□□□□ -0.68
RFFL-204ENST00000414419 CERS2Q96G23 380 aa10.79□□□□□ -0.68
RFFL-204ENST00000414419 C17orf62Q9BQA9 187 aa10.79□□□□□ -0.68
RFFL-204ENST00000414419 AARSD1Q9BTE6 412 aaKnown RBP10.79□□□□□ -0.68
RFFL-204ENST00000414419 FAM117AQ9C073 453 aa10.79□□□□□ -0.68
RFFL-204ENST00000414419 SEMA4CQ9C0C4 833 aa10.79□□□□□ -0.68
RFFL-204ENST00000414419 SPRTNQ9H040 489 aaPredicted RBP10.79□□□□□ -0.68
RFFL-204ENST00000414419 CHST8Q9H2A9 424 aa10.79□□□□□ -0.68
RFFL-204ENST00000414419 AKIRIN1Q9H9L7 192 aaPredicted RBP10.79□□□□□ -0.68
RFFL-204ENST00000414419 TXLNGQ9NUQ3 528 aa10.79□□□□□ -0.68
RFFL-204ENST00000414419 GEMIN8Q9NWZ8 242 aaKnown RBP10.79□□□□□ -0.68
RFFL-204ENST00000414419 TAS2R13Q9NYV9 303 aa10.79□□□□□ -0.68
RFFL-204ENST00000414419 TRMT6Q9UJA5 497 aaKnown RBP10.79□□□□□ -0.68
RFFL-204ENST00000414419 SRPK3Q9UPE1 567 aa10.79□□□□□ -0.68
RFFL-204ENST00000414419 POLHQ9Y253 713 aa10.79□□□□□ -0.68
RFFL-204ENST00000414419 KLHL20Q9Y2M5 609 aa10.79□□□□□ -0.68
RFFL-204ENST00000414419 HEMK1Q9Y5R4 338 aaPredicted RBP10.79□□□□□ -0.68
RFFL-204ENST00000414419 MDC1Q14676 2089 aaKnown RBP10.79□□□□□ -0.68
RFFL-204ENST00000414419 KALRNO60229 2985 aa10.79□□□□□ -0.68
RFFL-204ENST00000414419 FASNP49327 2511 aaKnown RBP10.79□□□□□ -0.68
RFFL-204ENST00000414419 FER1L5A0AVI2 2057 aa10.78□□□□□ -0.68
RFFL-204ENST00000414419 FAM187AA6NFU0 413 aa10.78□□□□□ -0.68
RFFL-204ENST00000414419 ARHGEF33A8MVX0 844 aa10.78□□□□□ -0.68
RFFL-204ENST00000414419 TARM1B6A8C7 271 aa10.78□□□□□ -0.68
RFFL-204ENST00000414419 TERTO14746 1132 aaKnown RBP10.78□□□□□ -0.68
RFFL-204ENST00000414419 ZSCAN9O15535 394 aaPredicted RBP10.78□□□□□ -0.68
RFFL-204ENST00000414419 PSIP1O75475 530 aaKnown RBP10.78□□□□□ -0.68
RFFL-204ENST00000414419 RAB40ALP0C0E4 278 aa10.78□□□□□ -0.68
RFFL-204ENST00000414419 CMPK1P30085 196 aa10.78□□□□□ -0.68
RFFL-204ENST00000414419 RPA3P35244 121 aaPredicted RBP10.78□□□□□ -0.68
RFFL-204ENST00000414419 HSD17B2P37059 387 aa10.78□□□□□ -0.68
RFFL-204ENST00000414419 RGS4P49798 205 aa10.78□□□□□ -0.68
RFFL-204ENST00000414419 NFATC3Q12968 1075 aa10.78□□□□□ -0.68
RFFL-204ENST00000414419 PDIA2Q13087 525 aaKnown RBP10.78□□□□□ -0.68
RFFL-204ENST00000414419 KCNAB2Q13303 367 aa10.78□□□□□ -0.68
RFFL-204ENST00000414419 PTCHD3Q3KNS1 767 aa10.78□□□□□ -0.68
RFFL-204ENST00000414419 ATP1A1-AS1Q5TC04 95 aa10.78□□□□□ -0.68
RFFL-204ENST00000414419 ANKMY2Q8IV38 441 aa10.78□□□□□ -0.68
RFFL-204ENST00000414419 MCATQ8IVS2 390 aaKnown RBP10.78□□□□□ -0.68
RFFL-204ENST00000414419 IGDCC3Q8IVU1 814 aa10.78□□□□□ -0.68
RFFL-204ENST00000414419 C17orf53Q8N3J3 647 aaPredicted RBP10.78□□□□□ -0.68
RFFL-204ENST00000414419 DNAJC22Q8N4W6 341 aa10.78□□□□□ -0.68
RFFL-204ENST00000414419 ZNF655Q8N720 491 aaPredicted RBP10.78□□□□□ -0.68
RFFL-204ENST00000414419 SPATA4Q8NEY3 305 aa10.78□□□□□ -0.68
RFFL-204ENST00000414419 DENND1AQ8TEH3 1009 aa10.78□□□□□ -0.68
RFFL-204ENST00000414419 SMPDL3AQ92484 453 aa10.78□□□□□ -0.68
RFFL-204ENST00000414419 PWWP2AQ96N64 755 aa10.78□□□□□ -0.68
RFFL-204ENST00000414419 NDNQ99608 321 aa10.78□□□□□ -0.68
RFFL-204ENST00000414419 SLC30A3Q99726 388 aa10.78□□□□□ -0.68
RFFL-204ENST00000414419 MIPEPQ99797 713 aa10.78□□□□□ -0.68
RFFL-204ENST00000414419 NDC1Q9BTX1 674 aa10.78□□□□□ -0.68
RFFL-204ENST00000414419 NLNQ9BYT8 704 aa10.78□□□□□ -0.68
RFFL-204ENST00000414419 PCMTD2Q9NV79 361 aa10.78□□□□□ -0.68
RFFL-204ENST00000414419 EURLQ9NYK6 297 aa10.78□□□□□ -0.68
RFFL-204ENST00000414419 GPN3Q9UHW5 284 aaPredicted RBP10.78□□□□□ -0.68
RFFL-204ENST00000414419 SNX7Q9UNH6 387 aa10.78□□□□□ -0.68
RFFL-204ENST00000414419 MAN2B2Q9Y2E5 1009 aa10.78□□□□□ -0.68
RFFL-204ENST00000414419 SNX24Q9Y343 169 aa10.78□□□□□ -0.68
RFFL-204ENST00000414419 KRT87PA6NCN2 255 aa10.77□□□□□ -0.69
RFFL-204ENST00000414419 PABPN1LA6NDY0 278 aaKnown RBP10.77□□□□□ -0.69
RFFL-204ENST00000414419 B8ZZF3 427 aa10.77□□□□□ -0.69
RFFL-204ENST00000414419 MYO1CO00159 1063 aa10.77□□□□□ -0.69
RFFL-204ENST00000414419 EIF3FO00303 357 aaPredicted RBP10.77□□□□□ -0.69
RFFL-204ENST00000414419 FANCGO15287 622 aa10.77□□□□□ -0.69
RFFL-204ENST00000414419 PRICKLE3O43900 615 aaPredicted RBP10.77□□□□□ -0.69
RFFL-204ENST00000414419 AHSGP02765 367 aa10.77□□□□□ -0.69
RFFL-204ENST00000414419 CD63P08962 238 aa10.77□□□□□ -0.69
RFFL-204ENST00000414419 ATXN8OSP0DMR3 200 aa10.77□□□□□ -0.69
RFFL-204ENST00000414419 ALAS2P22557 587 aa10.77□□□□□ -0.69
RFFL-204ENST00000414419 MCM3P25205 808 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms