RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 PARVBQ9HBI1 364 aa21.58■■□□□ 1.05
PTCD3-203ENST00000409783 GPAMQ9HCL2 828 aa21.58■■□□□ 1.05
PTCD3-203ENST00000409783 ZMIZ1Q9ULJ6 1067 aa21.58■■□□□ 1.05
PTCD3-203ENST00000409783 RAXQ9Y2V3 346 aa21.58■■□□□ 1.05
PTCD3-203ENST00000409783 USP24Q9UPU5 2620 aa21.58■■□□□ 1.04
PTCD3-203ENST00000409783 E7ENX8 843 aa21.57■■□□□ 1.04
PTCD3-203ENST00000409783 RIPK2O43353 540 aa21.57■■□□□ 1.04
PTCD3-203ENST00000409783 STMN1P16949 149 aa21.57■■□□□ 1.04
PTCD3-203ENST00000409783 PSMB5P28074 263 aa21.57■■□□□ 1.04
PTCD3-203ENST00000409783 IMPA1P29218 277 aa21.57■■□□□ 1.04
PTCD3-203ENST00000409783 OAS2P29728 719 aaKnown RBP21.57■■□□□ 1.04
PTCD3-203ENST00000409783 PNLIPRP1P54315 467 aa21.57■■□□□ 1.04
PTCD3-203ENST00000409783 TUBB4BP68371 445 aa21.57■■□□□ 1.04
PTCD3-203ENST00000409783 TAP2Q03519 686 aa21.57■■□□□ 1.04
PTCD3-203ENST00000409783 DCAF12Q5T6F0 453 aa21.57■■□□□ 1.04
PTCD3-203ENST00000409783 SBSNQ6UWP8 590 aa21.57■■□□□ 1.04
PTCD3-203ENST00000409783 OR2A1Q8NGT9 310 aa21.57■■□□□ 1.04
PTCD3-203ENST00000409783 MCOLN3Q8TDD5 553 aa21.57■■□□□ 1.04
PTCD3-203ENST00000409783 ASPSCR1Q9BZE9 553 aa21.57■■□□□ 1.04
PTCD3-203ENST00000409783 CHRNA10Q9GZZ6 450 aa21.57■■□□□ 1.04
PTCD3-203ENST00000409783 SPTBP11277 2137 aa21.56■■□□□ 1.04
PTCD3-203ENST00000409783 A0A087WUV0 522 aaPredicted RBP21.56■■□□□ 1.04
PTCD3-203ENST00000409783 CDC7O00311 574 aa21.56■■□□□ 1.04
PTCD3-203ENST00000409783 POLR1CO15160 346 aaPredicted RBP21.56■■□□□ 1.04
PTCD3-203ENST00000409783 SYF2O95926 243 aaKnown RBP21.56■■□□□ 1.04
PTCD3-203ENST00000409783 FGF5P12034 268 aa21.56■■□□□ 1.04
PTCD3-203ENST00000409783 CYP2A7P20853 494 aa21.56■■□□□ 1.04
PTCD3-203ENST00000409783 GMPRP36959 345 aa21.56■■□□□ 1.04
PTCD3-203ENST00000409783 HSD17B2P37059 387 aa21.56■■□□□ 1.04
PTCD3-203ENST00000409783 EIF2S3P41091 472 aaKnown RBP21.56■■□□□ 1.04
PTCD3-203ENST00000409783 GABRA4P48169 554 aa21.56■■□□□ 1.04
PTCD3-203ENST00000409783 SLC12A2P55011 1212 aa21.56■■□□□ 1.04
PTCD3-203ENST00000409783 PCBP4P57723 403 aaKnown RBP21.56■■□□□ 1.04
PTCD3-203ENST00000409783 RAB10P61026 200 aa21.56■■□□□ 1.04
PTCD3-203ENST00000409783 FOXM1Q08050 763 aa21.56■■□□□ 1.04
PTCD3-203ENST00000409783 IL11RAQ14626 422 aa21.56■■□□□ 1.04
PTCD3-203ENST00000409783 PPP1R3AQ16821 1122 aa21.56■■□□□ 1.04
PTCD3-203ENST00000409783 ZXDCQ2QGD7 858 aaPredicted RBP21.56■■□□□ 1.04
PTCD3-203ENST00000409783 TMEM164Q5U3C3 297 aa21.56■■□□□ 1.04
PTCD3-203ENST00000409783 CEACAM20Q6UY09 585 aa21.56■■□□□ 1.04
PTCD3-203ENST00000409783 MBOAT1Q6ZNC8 495 aa21.56■■□□□ 1.04
PTCD3-203ENST00000409783 CMC1Q7Z7K0 106 aa21.56■■□□□ 1.04
PTCD3-203ENST00000409783 C19orf47Q8N9M1 422 aaKnown RBP21.56■■□□□ 1.04
PTCD3-203ENST00000409783 PPFIBP2Q8ND30 876 aa21.56■■□□□ 1.04
PTCD3-203ENST00000409783 SMPDL3AQ92484 453 aa21.56■■□□□ 1.04
PTCD3-203ENST00000409783 UBXN10Q96LJ8 280 aa21.56■■□□□ 1.04
PTCD3-203ENST00000409783 CCDC138Q96M89 665 aa21.56■■□□□ 1.04
PTCD3-203ENST00000409783 TEFMQ96QE5 360 aaKnown RBP21.56■■□□□ 1.04
PTCD3-203ENST00000409783 FAM60AQ9NP50 221 aa21.56■■□□□ 1.04
PTCD3-203ENST00000409783 STOX2Q9P2F5 926 aaPredicted RBP21.56■■□□□ 1.04
PTCD3-203ENST00000409783 ANKRD11Q6UB99 2663 aaPredicted RBP21.56■■□□□ 1.04
PTCD3-203ENST00000409783 CELSR3Q9NYQ7 3312 aa21.56■■□□□ 1.04
PTCD3-203ENST00000409783 IQCJ-SCHIP1C9J366 451 aaPredicted RBP21.55■■□□□ 1.04
PTCD3-203ENST00000409783 FKBP9O95302 570 aa21.55■■□□□ 1.04
PTCD3-203ENST00000409783 MSL3P1P0C860 447 aa21.55■■□□□ 1.04
PTCD3-203ENST00000409783 ARL4DP49703 201 aa21.55■■□□□ 1.04
PTCD3-203ENST00000409783 YBX1P67809 324 aaKnown RBP21.55■■□□□ 1.04
PTCD3-203ENST00000409783 ACY1Q03154 408 aa21.55■■□□□ 1.04
PTCD3-203ENST00000409783 TUBB3Q13509 450 aa21.55■■□□□ 1.04
PTCD3-203ENST00000409783 BMPR2Q13873 1038 aa21.55■■□□□ 1.04
PTCD3-203ENST00000409783 GPR19Q15760 415 aa21.55■■□□□ 1.04
PTCD3-203ENST00000409783 KIAA1614Q5VZ46 1190 aa21.55■■□□□ 1.04
PTCD3-203ENST00000409783 SUSD1Q6UWL2 747 aa21.55■■□□□ 1.04
PTCD3-203ENST00000409783 CDHR3Q6ZTQ4 885 aa21.55■■□□□ 1.04
PTCD3-203ENST00000409783 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP21.55■■□□□ 1.04
PTCD3-203ENST00000409783 ZNF501Q96CX3 271 aaPredicted RBP21.55■■□□□ 1.04
PTCD3-203ENST00000409783 PAFAH2Q99487 392 aa21.55■■□□□ 1.04
PTCD3-203ENST00000409783 ZPBPQ9BS86 351 aa21.55■■□□□ 1.04
PTCD3-203ENST00000409783 DERL2Q9GZP9 239 aa21.55■■□□□ 1.04
PTCD3-203ENST00000409783 PDE7BQ9NP56 450 aa21.55■■□□□ 1.04
PTCD3-203ENST00000409783 FGF21Q9NSA1 209 aa21.55■■□□□ 1.04
PTCD3-203ENST00000409783 SOHLH2Q9NX45 425 aa21.55■■□□□ 1.04
PTCD3-203ENST00000409783 NOVA2Q9UNW9 492 aaKnown RBP21.55■■□□□ 1.04
PTCD3-203ENST00000409783 KLHL20Q9Y2M5 609 aa21.55■■□□□ 1.04
PTCD3-203ENST00000409783 HEATR5BQ9P2D3 2071 aa21.55■■□□□ 1.04
PTCD3-203ENST00000409783 HCRTR1O43613 425 aa21.54■■□□□ 1.04
PTCD3-203ENST00000409783 ENO2P09104 434 aaPredicted RBP21.54■■□□□ 1.04
PTCD3-203ENST00000409783 SLC35E2BP0CK96 405 aa21.54■■□□□ 1.04
PTCD3-203ENST00000409783 MAGP20916 626 aa21.54■■□□□ 1.04
PTCD3-203ENST00000409783 GCAP28676 217 aa21.54■■□□□ 1.04
PTCD3-203ENST00000409783 VSNL1P62760 191 aa21.54■■□□□ 1.04
PTCD3-203ENST00000409783 SF1Q15637 639 aaKnown RBP21.54■■□□□ 1.04
PTCD3-203ENST00000409783 UAP1Q16222 522 aaPredicted RBP21.54■■□□□ 1.04
PTCD3-203ENST00000409783 TMTC4Q5T4D3 741 aa21.54■■□□□ 1.04
PTCD3-203ENST00000409783 MROH9Q5TGP6 573 aa21.54■■□□□ 1.04
PTCD3-203ENST00000409783 FCRL6Q6DN72 434 aa21.54■■□□□ 1.04
PTCD3-203ENST00000409783 ZFAND4Q86XD8 727 aa21.54■■□□□ 1.04
PTCD3-203ENST00000409783 DTX1Q86Y01 620 aa21.54■■□□□ 1.04
PTCD3-203ENST00000409783 SPATA6LQ8N4H0 392 aa21.54■■□□□ 1.04
PTCD3-203ENST00000409783 OR2L3Q8NG85 312 aa21.54■■□□□ 1.04
PTCD3-203ENST00000409783 DCAKDQ8WVC6 231 aa21.54■■□□□ 1.04
PTCD3-203ENST00000409783 TCTN2Q96GX1 697 aa21.54■■□□□ 1.04
PTCD3-203ENST00000409783 DHRS4Q9BTZ2 278 aa21.54■■□□□ 1.04
PTCD3-203ENST00000409783 CAMSAP3Q9P1Y5 1249 aaPredicted RBP21.54■■□□□ 1.04
PTCD3-203ENST00000409783 PCDHB11Q9Y5F2 797 aa21.54■■□□□ 1.04
PTCD3-203ENST00000409783 KLK4Q9Y5K2 254 aa21.54■■□□□ 1.04
PTCD3-203ENST00000409783 NPEPPSL1A6NEC2 478 aa21.53■■□□□ 1.04
PTCD3-203ENST00000409783 SRRM3A6NNA2 597 aaPredicted RBP21.53■■□□□ 1.04
PTCD3-203ENST00000409783 ZNF839A8K0R7 811 aa21.53■■□□□ 1.04
PTCD3-203ENST00000409783 TIAF1O95411 115 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms