RNA–Protein interactions for RNA: ENST00000402203.5

TNRC6B-203, Transcript of trinucleotide repeat containing 6B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TNRC6B, Length 3,444 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6B-203ENST00000402203 SPHK2Q9NRA0 654 aa12.95□□□□□ -0.34
TNRC6B-203ENST00000402203 CNOT11Q9UKZ1 510 aaKnown RBP12.95□□□□□ -0.34
TNRC6B-203ENST00000402203 PLAGL1Q9UM63 463 aa12.95□□□□□ -0.34
TNRC6B-203ENST00000402203 HS3ST2Q9Y278 367 aa12.95□□□□□ -0.34
TNRC6B-203ENST00000402203 CFAP20Q9Y6A4 193 aaKnown RBP12.95□□□□□ -0.34
TNRC6B-203ENST00000402203 SMIM31A0A1B0GVY4 71 aa12.95□□□□□ -0.34
TNRC6B-203ENST00000402203 ARHGEF33A8MVX0 844 aa12.95□□□□□ -0.34
TNRC6B-203ENST00000402203 GRXCR1A8MXD5 290 aa12.95□□□□□ -0.34
TNRC6B-203ENST00000402203 hCG_2039718K7EN88 272 aa12.95□□□□□ -0.34
TNRC6B-203ENST00000402203 CXCR6O00574 342 aa12.95□□□□□ -0.34
TNRC6B-203ENST00000402203 SGTAO43765 313 aa12.95□□□□□ -0.34
TNRC6B-203ENST00000402203 GMNNO75496 209 aa12.95□□□□□ -0.34
TNRC6B-203ENST00000402203 GPIP06744 558 aa12.95□□□□□ -0.34
TNRC6B-203ENST00000402203 ADH1AP07327 375 aa12.95□□□□□ -0.34
TNRC6B-203ENST00000402203 NUDT7P0C024 238 aa12.95□□□□□ -0.34
TNRC6B-203ENST00000402203 PFKLP17858 780 aa12.95□□□□□ -0.34
TNRC6B-203ENST00000402203 MSH3P20585 1137 aa12.95□□□□□ -0.34
TNRC6B-203ENST00000402203 SLC6A11P48066 632 aa12.95□□□□□ -0.34
TNRC6B-203ENST00000402203 IRF8Q02556 426 aa12.95□□□□□ -0.34
TNRC6B-203ENST00000402203 VAC14Q08AM6 782 aa12.95□□□□□ -0.34
TNRC6B-203ENST00000402203 GPR33Q49SQ1 333 aa12.95□□□□□ -0.34
TNRC6B-203ENST00000402203 VTCN1Q7Z7D3 282 aa12.95□□□□□ -0.34
TNRC6B-203ENST00000402203 RASGEF1AQ8N9B8 481 aa12.95□□□□□ -0.34
TNRC6B-203ENST00000402203 MAL2Q969L2 176 aa12.95□□□□□ -0.34
TNRC6B-203ENST00000402203 PKD2L2Q9NZM6 624 aa12.95□□□□□ -0.34
TNRC6B-203ENST00000402203 SH2B3Q9UQQ2 575 aa12.95□□□□□ -0.34
TNRC6B-203ENST00000402203 LINC00271P0C7V0 271 aa12.94□□□□□ -0.34
TNRC6B-203ENST00000402203 EBLN1P0CF75 366 aa12.94□□□□□ -0.34
TNRC6B-203ENST00000402203 TIMP2P16035 220 aa12.94□□□□□ -0.34
TNRC6B-203ENST00000402203 POLR2EP19388 210 aaKnown RBP12.94□□□□□ -0.34
TNRC6B-203ENST00000402203 GGT1P19440 569 aa12.94□□□□□ -0.34
TNRC6B-203ENST00000402203 JAK1P23458 1154 aa12.94□□□□□ -0.34
TNRC6B-203ENST00000402203 HTR1EP28566 365 aa12.94□□□□□ -0.34
TNRC6B-203ENST00000402203 GTF2H3Q13889 308 aa12.94□□□□□ -0.34
TNRC6B-203ENST00000402203 TMC5Q6UXY8 1006 aa12.94□□□□□ -0.34
TNRC6B-203ENST00000402203 B3GNT6Q6ZMB0 384 aa12.94□□□□□ -0.34
TNRC6B-203ENST00000402203 ECHDC3Q96DC8 303 aa12.94□□□□□ -0.34
TNRC6B-203ENST00000402203 ERVW-1Q9UQF0 538 aa12.94□□□□□ -0.34
TNRC6B-203ENST00000402203 COMMD3-BMI1R4GMX3 469 aa12.94□□□□□ -0.34
TNRC6B-203ENST00000402203 PABPN1LA6NDY0 278 aaKnown RBP12.94□□□□□ -0.34
TNRC6B-203ENST00000402203 MYO1GB0I1T2 1018 aa12.94□□□□□ -0.34
TNRC6B-203ENST00000402203 E2F6O75461 281 aa12.94□□□□□ -0.34
TNRC6B-203ENST00000402203 KRT6AP02538 564 aa12.94□□□□□ -0.34
TNRC6B-203ENST00000402203 KRT6BP04259 564 aa12.94□□□□□ -0.34
TNRC6B-203ENST00000402203 AGXTP21549 392 aa12.94□□□□□ -0.34
TNRC6B-203ENST00000402203 FSHRP23945 695 aa12.94□□□□□ -0.34
TNRC6B-203ENST00000402203 KRT6CP48668 564 aa12.94□□□□□ -0.34
TNRC6B-203ENST00000402203 MEP1AQ16819 746 aa12.94□□□□□ -0.34
TNRC6B-203ENST00000402203 TMTC4Q5T4D3 741 aa12.94□□□□□ -0.34
TNRC6B-203ENST00000402203 CES5AQ6NT32 575 aa12.94□□□□□ -0.34
TNRC6B-203ENST00000402203 ZCCHC8Q6NZY4 707 aaKnown RBP12.94□□□□□ -0.34
TNRC6B-203ENST00000402203 TMEM220Q6QAJ8 160 aa12.94□□□□□ -0.34
TNRC6B-203ENST00000402203 ANGPTL8Q6UXH0 198 aa12.94□□□□□ -0.34
TNRC6B-203ENST00000402203 RIMKLAQ8IXN7 391 aa12.94□□□□□ -0.34
TNRC6B-203ENST00000402203 TBC1D21Q8IYX1 336 aa12.94□□□□□ -0.34
TNRC6B-203ENST00000402203 ZNF548Q8NEK5 533 aaPredicted RBP12.94□□□□□ -0.34
TNRC6B-203ENST00000402203 FAM120BQ96EK7 910 aaKnown RBP12.94□□□□□ -0.34
TNRC6B-203ENST00000402203 SLC47A1Q96FL8 570 aa12.94□□□□□ -0.34
TNRC6B-203ENST00000402203 HIC2Q96JB3 615 aa12.94□□□□□ -0.34
TNRC6B-203ENST00000402203 POLR1BQ9H9Y6 1135 aa12.94□□□□□ -0.34
TNRC6B-203ENST00000402203 VNN3Q9NY84 501 aa12.94□□□□□ -0.34
TNRC6B-203ENST00000402203 PCDHB3Q9Y5E6 796 aa12.94□□□□□ -0.34
TNRC6B-203ENST00000402203 PCDHGA11Q9Y5H2 935 aa12.94□□□□□ -0.34
TNRC6B-203ENST00000402203 PTGES3LE9PB15 166 aa12.94□□□□□ -0.34
TNRC6B-203ENST00000402203 ZBTB11O95625 1053 aaPredicted RBP12.94□□□□□ -0.34
TNRC6B-203ENST00000402203 SLC16A8O95907 504 aa12.94□□□□□ -0.34
TNRC6B-203ENST00000402203 CEBPBP17676 345 aa12.94□□□□□ -0.34
TNRC6B-203ENST00000402203 TNFRSF1BP20333 461 aa12.94□□□□□ -0.34
TNRC6B-203ENST00000402203 CD9P21926 228 aa12.94□□□□□ -0.34
TNRC6B-203ENST00000402203 PFN3P60673 137 aa12.94□□□□□ -0.34
TNRC6B-203ENST00000402203 FOXM1Q08050 763 aa12.94□□□□□ -0.34
TNRC6B-203ENST00000402203 PON2Q15165 354 aa12.94□□□□□ -0.34
TNRC6B-203ENST00000402203 CRTC3Q6UUV7 619 aa12.94□□□□□ -0.34
TNRC6B-203ENST00000402203 SPRED1Q7Z699 444 aa12.94□□□□□ -0.34
TNRC6B-203ENST00000402203 CPXM2Q8N436 756 aa12.94□□□□□ -0.34
TNRC6B-203ENST00000402203 DPP10Q8N608 796 aa12.94□□□□□ -0.34
TNRC6B-203ENST00000402203 NXPE3Q969Y0 559 aa12.94□□□□□ -0.34
TNRC6B-203ENST00000402203 NTMT1Q9BV86 223 aa12.94□□□□□ -0.34
TNRC6B-203ENST00000402203 TOR3AQ9H497 397 aa12.94□□□□□ -0.34
TNRC6B-203ENST00000402203 CLMPQ9H6B4 373 aa12.94□□□□□ -0.34
TNRC6B-203ENST00000402203 SERHLQ9NQF3 203 aa12.94□□□□□ -0.34
TNRC6B-203ENST00000402203 ELOVL7A1L3X0 281 aa12.93□□□□□ -0.34
TNRC6B-203ENST00000402203 SLC28A1O00337 649 aa12.93□□□□□ -0.34
TNRC6B-203ENST00000402203 HS6ST1O60243 411 aa12.93□□□□□ -0.34
TNRC6B-203ENST00000402203 TIMP1P01033 207 aa12.93□□□□□ -0.34
TNRC6B-203ENST00000402203 WASP42768 502 aa12.93□□□□□ -0.34
TNRC6B-203ENST00000402203 ARSFP54793 590 aa12.93□□□□□ -0.34
TNRC6B-203ENST00000402203 STARD3Q14849 445 aa12.93□□□□□ -0.34
TNRC6B-203ENST00000402203 ARHGEF6Q15052 776 aa12.93□□□□□ -0.34
TNRC6B-203ENST00000402203 CATSPEREQ5SY80 951 aa12.93□□□□□ -0.34
TNRC6B-203ENST00000402203 TMEM26Q6ZUK4 368 aa12.93□□□□□ -0.34
TNRC6B-203ENST00000402203 RSPRY1Q96DX4 576 aa12.93□□□□□ -0.34
TNRC6B-203ENST00000402203 CEP295NLQ96MC4 621 aa12.93□□□□□ -0.34
TNRC6B-203ENST00000402203 SEZ6LQ9BYH1 1024 aa12.93□□□□□ -0.34
TNRC6B-203ENST00000402203 REXO4Q9GZR2 422 aaKnown RBP12.93□□□□□ -0.34
TNRC6B-203ENST00000402203 RETREG1Q9H6L5 497 aa12.93□□□□□ -0.34
TNRC6B-203ENST00000402203 HSFX1Q9UBD0 423 aa12.93□□□□□ -0.34
TNRC6B-203ENST00000402203 FBXO10Q9UK96 956 aa12.93□□□□□ -0.34
TNRC6B-203ENST00000402203 PCYT1BQ9Y5K3 369 aaPredicted RBP12.93□□□□□ -0.34
TNRC6B-203ENST00000402203 PRSS23O95084 383 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms