RNA–Protein interactions for RNA: ENST00000401522.7

CHRFAM7A-203, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 1 (best) BASIC

Gene CHRFAM7A, Length 1,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-203ENST00000401522 MSH3P20585 1137 aa15.53■□□□□ 0.08
CHRFAM7A-203ENST00000401522 VARSP26640 1264 aaKnown RBP15.53■□□□□ 0.08
CHRFAM7A-203ENST00000401522 ARL1P40616 181 aaPredicted RBP15.53■□□□□ 0.08
CHRFAM7A-203ENST00000401522 ADARB1P78563 741 aaKnown RBP15.53■□□□□ 0.08
CHRFAM7A-203ENST00000401522 SIGLEC14Q08ET2 396 aa15.53■□□□□ 0.08
CHRFAM7A-203ENST00000401522 SBSNQ6UWP8 590 aa15.53■□□□□ 0.08
CHRFAM7A-203ENST00000401522 GPR180Q86V85 440 aa15.53■□□□□ 0.08
CHRFAM7A-203ENST00000401522 PDPRQ8NCN5 879 aa15.53■□□□□ 0.08
CHRFAM7A-203ENST00000401522 OR8J3Q8NGG0 315 aa15.53■□□□□ 0.08
CHRFAM7A-203ENST00000401522 ZNF420Q8TAQ5 688 aaPredicted RBP15.53■□□□□ 0.08
CHRFAM7A-203ENST00000401522 MAGEE2Q8TD90 523 aaPredicted RBP15.53■□□□□ 0.08
CHRFAM7A-203ENST00000401522 LRIG1Q96JA1 1093 aa15.53■□□□□ 0.08
CHRFAM7A-203ENST00000401522 VPS50Q96JG6 964 aa15.53■□□□□ 0.08
CHRFAM7A-203ENST00000401522 PPP3R2Q96LZ3 170 aa15.53■□□□□ 0.08
CHRFAM7A-203ENST00000401522 RNF145Q96MT1 663 aa15.53■□□□□ 0.08
CHRFAM7A-203ENST00000401522 NPLQ9BXD5 320 aaPredicted RBP15.53■□□□□ 0.08
CHRFAM7A-203ENST00000401522 TBC1D17Q9HA65 648 aa15.53■□□□□ 0.08
CHRFAM7A-203ENST00000401522 LMAN1LQ9HAT1 526 aa15.53■□□□□ 0.08
CHRFAM7A-203ENST00000401522 MAGEE1Q9HCI5 957 aa15.53■□□□□ 0.08
CHRFAM7A-203ENST00000401522 PRSS16Q9NQE7 514 aa15.53■□□□□ 0.08
CHRFAM7A-203ENST00000401522 EVLQ9UI08 416 aaPredicted RBP15.53■□□□□ 0.08
CHRFAM7A-203ENST00000401522 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.53■□□□□ 0.08
CHRFAM7A-203ENST00000401522 ANKRD28O15084 1053 aa15.53■□□□□ 0.08
CHRFAM7A-203ENST00000401522 BNIP3LO60238 219 aa15.53■□□□□ 0.08
CHRFAM7A-203ENST00000401522 ADAM23O75077 832 aa15.53■□□□□ 0.08
CHRFAM7A-203ENST00000401522 DEAF1O75398 565 aaPredicted RBP15.53■□□□□ 0.08
CHRFAM7A-203ENST00000401522 SEC24DO94855 1032 aaPredicted RBP15.53■□□□□ 0.08
CHRFAM7A-203ENST00000401522 KLF8O95600 359 aaPredicted RBP15.53■□□□□ 0.08
CHRFAM7A-203ENST00000401522 ANXA6P08133 673 aa15.53■□□□□ 0.08
CHRFAM7A-203ENST00000401522 G6PDP11413 515 aa15.53■□□□□ 0.08
CHRFAM7A-203ENST00000401522 RPS3P23396 243 aaKnown RBP eCLIP15.53■□□□□ 0.08
CHRFAM7A-203ENST00000401522 RPL10P27635 214 aaKnown RBP15.53■□□□□ 0.08
CHRFAM7A-203ENST00000401522 HTR6P50406 440 aa15.53■□□□□ 0.08
CHRFAM7A-203ENST00000401522 CAMK2GQ13555 558 aaPredicted RBP15.53■□□□□ 0.08
CHRFAM7A-203ENST00000401522 ELAVL3Q14576 367 aaKnown RBP15.53■□□□□ 0.08
CHRFAM7A-203ENST00000401522 UBXN2BQ14CS0 331 aa15.53■□□□□ 0.08
CHRFAM7A-203ENST00000401522 SMU1Q2TAY7 513 aa15.53■□□□□ 0.08
CHRFAM7A-203ENST00000401522 DCBLD1Q8N8Z6 715 aa15.53■□□□□ 0.08
CHRFAM7A-203ENST00000401522 OR4F6Q8NGB9 312 aa15.53■□□□□ 0.08
CHRFAM7A-203ENST00000401522 RPLP0P6Q8NHW5 317 aa15.53■□□□□ 0.08
CHRFAM7A-203ENST00000401522 PNPT1Q8TCS8 783 aaKnown RBP15.53■□□□□ 0.08
CHRFAM7A-203ENST00000401522 CCDC115Q96NT0 180 aa15.53■□□□□ 0.08
CHRFAM7A-203ENST00000401522 ZBTB18Q99592 522 aa15.53■□□□□ 0.08
CHRFAM7A-203ENST00000401522 SEPHS2Q99611 448 aa15.53■□□□□ 0.08
CHRFAM7A-203ENST00000401522 HEPHQ9BQS7 1158 aa15.53■□□□□ 0.08
CHRFAM7A-203ENST00000401522 GPR63Q9BZJ6 419 aa15.53■□□□□ 0.08
CHRFAM7A-203ENST00000401522 FOXQ1Q9C009 403 aa15.53■□□□□ 0.08
CHRFAM7A-203ENST00000401522 ACTL8Q9H568 366 aa15.53■□□□□ 0.08
CHRFAM7A-203ENST00000401522 IQCF5A8MTL0 148 aa15.52■□□□□ 0.07
CHRFAM7A-203ENST00000401522 CHURC1-FNTBB4DL54 471 aa15.52■□□□□ 0.07
CHRFAM7A-203ENST00000401522 FFAR2O15552 330 aa15.52■□□□□ 0.07
CHRFAM7A-203ENST00000401522 FZD6O60353 706 aa15.52■□□□□ 0.07
CHRFAM7A-203ENST00000401522 GMNNO75496 209 aa15.52■□□□□ 0.07
CHRFAM7A-203ENST00000401522 RAP2AP10114 183 aa15.52■□□□□ 0.07
CHRFAM7A-203ENST00000401522 ZNF7P17097 686 aaPredicted RBP15.52■□□□□ 0.07
CHRFAM7A-203ENST00000401522 GGT1P19440 569 aa15.52■□□□□ 0.07
CHRFAM7A-203ENST00000401522 HMOX2P30519 316 aa15.52■□□□□ 0.07
CHRFAM7A-203ENST00000401522 HMGCLP35914 325 aa15.52■□□□□ 0.07
CHRFAM7A-203ENST00000401522 RGS4P49798 205 aa15.52■□□□□ 0.07
CHRFAM7A-203ENST00000401522 TRAF3Q13114 568 aa15.52■□□□□ 0.07
CHRFAM7A-203ENST00000401522 AP5B1Q2VPB7 878 aa15.52■□□□□ 0.07
CHRFAM7A-203ENST00000401522 FAM98BQ52LJ0 330 aaKnown RBP15.52■□□□□ 0.07
CHRFAM7A-203ENST00000401522 CCNYL2Q5T2Q4 361 aa15.52■□□□□ 0.07
CHRFAM7A-203ENST00000401522 PTRHD1Q6GMV3 140 aaKnown RBP15.52■□□□□ 0.07
CHRFAM7A-203ENST00000401522 RNF165Q6ZSG1 346 aa15.52■□□□□ 0.07
CHRFAM7A-203ENST00000401522 FKBP9P1Q75LS8 142 aa15.52■□□□□ 0.07
CHRFAM7A-203ENST00000401522 HOMEZQ8IX15 550 aa15.52■□□□□ 0.07
CHRFAM7A-203ENST00000401522 DTWD1Q8N5C7 304 aa15.52■□□□□ 0.07
CHRFAM7A-203ENST00000401522 CHST14Q8NCH0 376 aa15.52■□□□□ 0.07
CHRFAM7A-203ENST00000401522 OR6K2Q8NGY2 324 aa15.52■□□□□ 0.07
CHRFAM7A-203ENST00000401522 PPM1MQ96MI6 270 aa15.52■□□□□ 0.07
CHRFAM7A-203ENST00000401522 FAM129BQ96TA1 746 aa15.52■□□□□ 0.07
CHRFAM7A-203ENST00000401522 CLPBQ9H078 707 aa15.52■□□□□ 0.07
CHRFAM7A-203ENST00000401522 USP22Q9UPT9 525 aa15.52■□□□□ 0.07
CHRFAM7A-203ENST00000401522 POLR3HQ9Y535 204 aaPredicted RBP15.52■□□□□ 0.07
CHRFAM7A-203ENST00000401522 PRSS23O95084 383 aa15.51■□□□□ 0.07
CHRFAM7A-203ENST00000401522 SNAP29O95721 258 aa15.51■□□□□ 0.07
CHRFAM7A-203ENST00000401522 ALBP02768 609 aa15.51■□□□□ 0.07
CHRFAM7A-203ENST00000401522 WASP42768 502 aa15.51■□□□□ 0.07
CHRFAM7A-203ENST00000401522 MAD2L1Q13257 205 aaPredicted RBP15.51■□□□□ 0.07
CHRFAM7A-203ENST00000401522 EOGTQ5NDL2 527 aa15.51■□□□□ 0.07
CHRFAM7A-203ENST00000401522 OFCC1Q8IZS5 231 aa15.51■□□□□ 0.07
CHRFAM7A-203ENST00000401522 PJA1Q8NG27 643 aa15.51■□□□□ 0.07
CHRFAM7A-203ENST00000401522 CLDN23Q96B33 292 aa15.51■□□□□ 0.07
CHRFAM7A-203ENST00000401522 C19orf43Q9BQ61 176 aa15.51■□□□□ 0.07
CHRFAM7A-203ENST00000401522 ATP13A3Q9H7F0 1226 aa15.51■□□□□ 0.07
CHRFAM7A-203ENST00000401522 LIN28AQ9H9Z2 209 aaKnown RBP15.51■□□□□ 0.07
CHRFAM7A-203ENST00000401522 CXorf21Q9HAI6 301 aa15.51■□□□□ 0.07
CHRFAM7A-203ENST00000401522 IL36AQ9UHA7 158 aa15.51■□□□□ 0.07
CHRFAM7A-203ENST00000401522 GNPTGQ9UJJ9 305 aa15.51■□□□□ 0.07
CHRFAM7A-203ENST00000401522 EIF3LQ9Y262 564 aaKnown RBP15.51■□□□□ 0.07
CHRFAM7A-203ENST00000401522 OARD1Q9Y530 152 aa15.51■□□□□ 0.07
CHRFAM7A-203ENST00000401522 A0A1W2PQF6 199 aa15.51■□□□□ 0.07
CHRFAM7A-203ENST00000401522 KCNH1O95259 989 aa15.51■□□□□ 0.07
CHRFAM7A-203ENST00000401522 CLIC3O95833 236 aa15.51■□□□□ 0.07
CHRFAM7A-203ENST00000401522 GKP32189 559 aa15.51■□□□□ 0.07
CHRFAM7A-203ENST00000401522 SOX11P35716 441 aa15.51■□□□□ 0.07
CHRFAM7A-203ENST00000401522 HLCSP50747 726 aa15.51■□□□□ 0.07
CHRFAM7A-203ENST00000401522 ALDH3A2P51648 485 aa15.51■□□□□ 0.07
CHRFAM7A-203ENST00000401522 EMP3P54852 163 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms