RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 KIF1CO43896 1103 aaKnown RBP15.42■□□□□ 0.06
HMGA1-204ENST00000401473 TYROBPO43914 113 aa15.42■□□□□ 0.06
HMGA1-204ENST00000401473 CPNE6O95741 557 aa15.42■□□□□ 0.06
HMGA1-204ENST00000401473 RBP1P09455 135 aa15.42■□□□□ 0.06
HMGA1-204ENST00000401473 GFERP55789 205 aa15.42■□□□□ 0.06
HMGA1-204ENST00000401473 N4BP2L1Q5TBK1 243 aaPredicted RBP15.42■□□□□ 0.06
HMGA1-204ENST00000401473 WDR74Q6RFH5 385 aaPredicted RBP15.42■□□□□ 0.06
HMGA1-204ENST00000401473 LCA5Q86VQ0 697 aa15.42■□□□□ 0.06
HMGA1-204ENST00000401473 FAM20CQ8IXL6 584 aa15.42■□□□□ 0.06
HMGA1-204ENST00000401473 SYTL1Q8IYJ3 562 aa15.42■□□□□ 0.06
HMGA1-204ENST00000401473 SH3GL2Q99962 352 aa15.42■□□□□ 0.06
HMGA1-204ENST00000401473 SPATA7Q9P0W8 599 aa15.42■□□□□ 0.06
HMGA1-204ENST00000401473 PTBP2Q9UKA9 531 aaKnown RBP15.42■□□□□ 0.06
HMGA1-204ENST00000401473 GRID1Q9ULK0 1009 aa15.42■□□□□ 0.06
HMGA1-204ENST00000401473 PIPSLA2A3N6 862 aa15.41■□□□□ 0.06
HMGA1-204ENST00000401473 DUX1O43812 170 aa15.41■□□□□ 0.06
HMGA1-204ENST00000401473 ANXA5P08758 320 aa15.41■□□□□ 0.06
HMGA1-204ENST00000401473 PSMB5P28074 263 aa15.41■□□□□ 0.06
HMGA1-204ENST00000401473 PRDX3P30048 256 aaKnown RBP15.41■□□□□ 0.06
HMGA1-204ENST00000401473 GDF5P43026 501 aa15.41■□□□□ 0.06
HMGA1-204ENST00000401473 NAE1Q13564 534 aa15.41■□□□□ 0.06
HMGA1-204ENST00000401473 OOSP2Q86WS3 158 aa15.41■□□□□ 0.06
HMGA1-204ENST00000401473 OR2A1Q8NGT9 310 aa15.41■□□□□ 0.06
HMGA1-204ENST00000401473 FBXL8Q96CD0 374 aa15.41■□□□□ 0.06
HMGA1-204ENST00000401473 OR2A14Q96R47 310 aa15.41■□□□□ 0.06
HMGA1-204ENST00000401473 SMC6Q96SB8 1091 aa15.41■□□□□ 0.06
HMGA1-204ENST00000401473 EGFL8Q99944 293 aa15.41■□□□□ 0.06
HMGA1-204ENST00000401473 RAB33BQ9H082 229 aa15.41■□□□□ 0.06
HMGA1-204ENST00000401473 MRPL46Q9H2W6 279 aaKnown RBP15.41■□□□□ 0.06
HMGA1-204ENST00000401473 EPB41L1Q9H4G0 881 aa15.41■□□□□ 0.06
HMGA1-204ENST00000401473 CD274Q9NZQ7 290 aa15.41■□□□□ 0.06
HMGA1-204ENST00000401473 EPHA6Q9UF33 1036 aa15.41■□□□□ 0.06
HMGA1-204ENST00000401473 PLLPQ9Y342 182 aa15.41■□□□□ 0.06
HMGA1-204ENST00000401473 ASB1Q9Y576 335 aa15.41■□□□□ 0.06
HMGA1-204ENST00000401473 KDM1AO60341 852 aa15.4■□□□□ 0.06
HMGA1-204ENST00000401473 GLRA3O75311 464 aa15.4■□□□□ 0.06
HMGA1-204ENST00000401473 HSD17B2P37059 387 aa15.4■□□□□ 0.06
HMGA1-204ENST00000401473 LSSP48449 732 aa15.4■□□□□ 0.06
HMGA1-204ENST00000401473 PPM1FP49593 454 aaPredicted RBP15.4■□□□□ 0.06
HMGA1-204ENST00000401473 AGTR2P50052 363 aa15.4■□□□□ 0.06
HMGA1-204ENST00000401473 KPNA2P52292 529 aaKnown RBP15.4■□□□□ 0.06
HMGA1-204ENST00000401473 E2F1Q01094 437 aa15.4■□□□□ 0.06
HMGA1-204ENST00000401473 MPP2Q14168 576 aa15.4■□□□□ 0.06
HMGA1-204ENST00000401473 PFKFB4Q16877 469 aa15.4■□□□□ 0.06
HMGA1-204ENST00000401473 KLHL35Q6PF15 583 aa15.4■□□□□ 0.06
HMGA1-204ENST00000401473 PDPRQ8NCN5 879 aa15.4■□□□□ 0.06
HMGA1-204ENST00000401473 TCP10LQ8TDR4 215 aa15.4■□□□□ 0.06
HMGA1-204ENST00000401473 TLCD1Q96CP7 247 aa15.4■□□□□ 0.06
HMGA1-204ENST00000401473 APOPT1Q96IL0 206 aa15.4■□□□□ 0.06
HMGA1-204ENST00000401473 TSNARE1Q96NA8 513 aa15.4■□□□□ 0.06
HMGA1-204ENST00000401473 TGM7Q96PF1 710 aa15.4■□□□□ 0.06
HMGA1-204ENST00000401473 GFM1Q96RP9 751 aaKnown RBP15.4■□□□□ 0.06
HMGA1-204ENST00000401473 ACAT2Q9BWD1 397 aa15.4■□□□□ 0.06
HMGA1-204ENST00000401473 RAB11FIP5Q9BXF6 653 aa15.4■□□□□ 0.06
HMGA1-204ENST00000401473 SEMA6CQ9H3T2 930 aa15.4■□□□□ 0.06
HMGA1-204ENST00000401473 SYNDIG1Q9H7V2 258 aa15.4■□□□□ 0.06
HMGA1-204ENST00000401473 MKS1Q9NXB0 559 aa15.4■□□□□ 0.06
HMGA1-204ENST00000401473 ACTR10Q9NZ32 417 aa15.4■□□□□ 0.06
HMGA1-204ENST00000401473 SENP1Q9P0U3 644 aa15.4■□□□□ 0.06
HMGA1-204ENST00000401473 APOBEC2Q9Y235 224 aaKnown RBP15.4■□□□□ 0.06
HMGA1-204ENST00000401473 PTPRBP23467 1997 aa15.4■□□□□ 0.06
HMGA1-204ENST00000401473 SEC16AO15027 2179 aa15.4■□□□□ 0.06
HMGA1-204ENST00000401473 CCDC189A1A4V9 331 aa15.4■□□□□ 0.06
HMGA1-204ENST00000401473 GSAPA4D1B5 854 aa15.4■□□□□ 0.06
HMGA1-204ENST00000401473 GOLGA6L10A6NI86 522 aa15.4■□□□□ 0.06
HMGA1-204ENST00000401473 SYCE1LA8MT33 242 aa15.4■□□□□ 0.06
HMGA1-204ENST00000401473 SUPT3HB4E1H0 165 aa15.4■□□□□ 0.06
HMGA1-204ENST00000401473 ZW10O43264 779 aa15.4■□□□□ 0.06
HMGA1-204ENST00000401473 KLK8O60259 260 aa15.4■□□□□ 0.06
HMGA1-204ENST00000401473 PLIN3O60664 434 aa15.4■□□□□ 0.06
HMGA1-204ENST00000401473 SUPT3HO75486 399 aa15.4■□□□□ 0.06
HMGA1-204ENST00000401473 C9P02748 559 aa15.4■□□□□ 0.06
HMGA1-204ENST00000401473 PROCP04070 461 aa15.4■□□□□ 0.06
HMGA1-204ENST00000401473 RPA3P35244 121 aaPredicted RBP15.4■□□□□ 0.06
HMGA1-204ENST00000401473 GGT5P36269 586 aa15.4■□□□□ 0.06
HMGA1-204ENST00000401473 HNMTP50135 292 aa15.4■□□□□ 0.06
HMGA1-204ENST00000401473 PDX1P52945 283 aa15.4■□□□□ 0.06
HMGA1-204ENST00000401473 MAGOHP61326 146 aaKnown RBP15.4■□□□□ 0.06
HMGA1-204ENST00000401473 PTCHD3Q3KNS1 767 aa15.4■□□□□ 0.06
HMGA1-204ENST00000401473 TTMPQ5BVD1 217 aa15.4■□□□□ 0.06
HMGA1-204ENST00000401473 IRGCQ6NXR0 463 aa15.4■□□□□ 0.06
HMGA1-204ENST00000401473 TMEM71Q6P5X7 295 aa15.4■□□□□ 0.06
HMGA1-204ENST00000401473 FAM92BQ6ZTR7 304 aa15.4■□□□□ 0.06
HMGA1-204ENST00000401473 B3GNT8Q7Z7M8 397 aa15.4■□□□□ 0.06
HMGA1-204ENST00000401473 OR56A3Q8NH54 315 aa15.4■□□□□ 0.06
HMGA1-204ENST00000401473 SMPDL3AQ92484 453 aa15.4■□□□□ 0.06
HMGA1-204ENST00000401473 PHF21BQ96EK2 531 aa15.4■□□□□ 0.06
HMGA1-204ENST00000401473 OR4K3Q96R72 315 aa15.4■□□□□ 0.06
HMGA1-204ENST00000401473 MAP3K3Q99759 626 aa15.4■□□□□ 0.06
HMGA1-204ENST00000401473 TMEM79Q9BSE2 394 aa15.4■□□□□ 0.06
HMGA1-204ENST00000401473 ABCF3Q9NUQ8 709 aa15.4■□□□□ 0.06
HMGA1-204ENST00000401473 PDP2Q9P2J9 529 aa15.4■□□□□ 0.06
HMGA1-204ENST00000401473 SLC17A7Q9P2U7 560 aa15.4■□□□□ 0.06
HMGA1-204ENST00000401473 KLHL3Q9UH77 587 aa15.4■□□□□ 0.06
HMGA1-204ENST00000401473 MDC1Q14676 2089 aaKnown RBP15.39■□□□□ 0.05
HMGA1-204ENST00000401473 LRRC14BA6NHZ5 514 aa15.39■□□□□ 0.05
HMGA1-204ENST00000401473 ISM1B1AKI9 464 aa15.39■□□□□ 0.05
HMGA1-204ENST00000401473 D6RAR5 112 aa15.39■□□□□ 0.05
HMGA1-204ENST00000401473 UGT2B7P16662 529 aa15.39■□□□□ 0.05
HMGA1-204ENST00000401473 NPPBP16860 134 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms