RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 TMEM175Q9BSA9 504 aa4.82□□□□□ -1.64
SMAD4-202ENST00000398417 CD244Q9BZW8 370 aa4.82□□□□□ -1.64
SMAD4-202ENST00000398417 SDR39U1Q9NRG7 319 aaPredicted RBP4.82□□□□□ -1.64
SMAD4-202ENST00000398417 ARMC1Q9NVT9 282 aa4.82□□□□□ -1.64
SMAD4-202ENST00000398417 COQ6Q9Y2Z9 468 aa4.82□□□□□ -1.64
SMAD4-202ENST00000398417 TAF4O00268 1085 aa4.81□□□□□ -1.64
SMAD4-202ENST00000398417 XYLBO75191 536 aa4.81□□□□□ -1.64
SMAD4-202ENST00000398417 CREG1O75629 220 aa4.81□□□□□ -1.64
SMAD4-202ENST00000398417 BMP1P13497 986 aa4.81□□□□□ -1.64
SMAD4-202ENST00000398417 POLR2IP36954 125 aaKnown RBP4.81□□□□□ -1.64
SMAD4-202ENST00000398417 CTSOP43234 321 aaPredicted RBP4.81□□□□□ -1.64
SMAD4-202ENST00000398417 STK19P49842 368 aaPredicted RBP4.81□□□□□ -1.64
SMAD4-202ENST00000398417 KCNAB2Q13303 367 aa4.81□□□□□ -1.64
SMAD4-202ENST00000398417 SF1Q15637 639 aaKnown RBP4.81□□□□□ -1.64
SMAD4-202ENST00000398417 NPTX1Q15818 432 aa4.81□□□□□ -1.64
SMAD4-202ENST00000398417 HIST2H2ACQ16777 129 aaPredicted RBP4.81□□□□□ -1.64
SMAD4-202ENST00000398417 DGUOKQ16854 277 aa4.81□□□□□ -1.64
SMAD4-202ENST00000398417 HIST2H2AA3Q6FI13 130 aa4.81□□□□□ -1.64
SMAD4-202ENST00000398417 CLECL1Q8IZS7 167 aa4.81□□□□□ -1.64
SMAD4-202ENST00000398417 MFSD2AQ8NA29 543 aa4.81□□□□□ -1.64
SMAD4-202ENST00000398417 WFDC5Q8TCV5 224 aa4.81□□□□□ -1.64
SMAD4-202ENST00000398417 RORBQ92753 470 aa4.81□□□□□ -1.64
SMAD4-202ENST00000398417 SPACA7Q96KW9 195 aa4.81□□□□□ -1.64
SMAD4-202ENST00000398417 CDK5RAP1Q96SZ6 601 aaKnown RBP4.81□□□□□ -1.64
SMAD4-202ENST00000398417 SH3GL1Q99961 368 aa4.81□□□□□ -1.64
SMAD4-202ENST00000398417 GPN3Q9UHW5 284 aaPredicted RBP4.81□□□□□ -1.64
SMAD4-202ENST00000398417 TPRKBQ9Y3C4 175 aa4.81□□□□□ -1.64
SMAD4-202ENST00000398417 ZNF451Q9Y4E5 1061 aa4.81□□□□□ -1.64
SMAD4-202ENST00000398417 NRAPQ86VF7 1730 aa4.81□□□□□ -1.64
SMAD4-202ENST00000398417 H0YJX3 145 aa4.81□□□□□ -1.64
SMAD4-202ENST00000398417 OR7A17O14581 309 aa4.81□□□□□ -1.64
SMAD4-202ENST00000398417 MYF6P23409 242 aa4.81□□□□□ -1.64
SMAD4-202ENST00000398417 ALDH3A2P51648 485 aa4.81□□□□□ -1.64
SMAD4-202ENST00000398417 CLCN2P51788 898 aa4.81□□□□□ -1.64
SMAD4-202ENST00000398417 AP1S1P61966 158 aa4.81□□□□□ -1.64
SMAD4-202ENST00000398417 DSC1Q08554 894 aa4.81□□□□□ -1.64
SMAD4-202ENST00000398417 LMAN2Q12907 356 aa4.81□□□□□ -1.64
SMAD4-202ENST00000398417 ACOX1Q15067 660 aa4.81□□□□□ -1.64
SMAD4-202ENST00000398417 MPPE1Q53F39 396 aa4.81□□□□□ -1.64
SMAD4-202ENST00000398417 TERB1Q8NA31 727 aa4.81□□□□□ -1.64
SMAD4-202ENST00000398417 APIPQ96GX9 242 aa4.81□□□□□ -1.64
SMAD4-202ENST00000398417 EPB41L1Q9H4G0 881 aa4.81□□□□□ -1.64
SMAD4-202ENST00000398417 RERGLQ9H628 205 aa4.81□□□□□ -1.64
SMAD4-202ENST00000398417 SGK2Q9HBY8 427 aa4.81□□□□□ -1.64
SMAD4-202ENST00000398417 TUBA8Q9NY65 449 aaPredicted RBP4.81□□□□□ -1.64
SMAD4-202ENST00000398417 SAMHD1Q9Y3Z3 626 aaKnown RBP4.81□□□□□ -1.64
SMAD4-202ENST00000398417 ASPDHA6ND91 283 aa4.81□□□□□ -1.64
SMAD4-202ENST00000398417 BCKDKO14874 412 aa4.81□□□□□ -1.64
SMAD4-202ENST00000398417 EFCAB14O75071 495 aa4.81□□□□□ -1.64
SMAD4-202ENST00000398417 TULP3O75386 442 aa4.81□□□□□ -1.64
SMAD4-202ENST00000398417 DLGAP3O95886 979 aa4.81□□□□□ -1.64
SMAD4-202ENST00000398417 IL6P05231 212 aa4.81□□□□□ -1.64
SMAD4-202ENST00000398417 HLCSP50747 726 aa4.81□□□□□ -1.64
SMAD4-202ENST00000398417 FAM189BP81408 668 aa4.81□□□□□ -1.64
SMAD4-202ENST00000398417 NHSL2Q5HYW2 709 aa4.81□□□□□ -1.64
SMAD4-202ENST00000398417 ADGRF1Q5T601 910 aa4.81□□□□□ -1.64
SMAD4-202ENST00000398417 SLC22A15Q8IZD6 547 aa4.81□□□□□ -1.64
SMAD4-202ENST00000398417 DTWD1Q8N5C7 304 aa4.81□□□□□ -1.64
SMAD4-202ENST00000398417 ZNF366Q8N895 744 aa4.81□□□□□ -1.64
SMAD4-202ENST00000398417 KLHL25Q9H0H3 589 aa4.81□□□□□ -1.64
SMAD4-202ENST00000398417 AMBNQ9NP70 447 aa4.81□□□□□ -1.64
SMAD4-202ENST00000398417 ELOVL2Q9NXB9 296 aa4.81□□□□□ -1.64
SMAD4-202ENST00000398417 SLC13A4Q9UKG4 626 aa4.81□□□□□ -1.64
SMAD4-202ENST00000398417 CLEC4EQ9ULY5 219 aa4.81□□□□□ -1.64
SMAD4-202ENST00000398417 NHSQ6T4R5 1651 aa4.81□□□□□ -1.64
SMAD4-202ENST00000398417 MROH6A6NGR9 719 aa4.81□□□□□ -1.64
SMAD4-202ENST00000398417 UNCXA6NJT0 531 aa4.81□□□□□ -1.64
SMAD4-202ENST00000398417 NEDD8-MDP1E9PL57 170 aa4.81□□□□□ -1.64
SMAD4-202ENST00000398417 PLK4O00444 970 aa4.81□□□□□ -1.64
SMAD4-202ENST00000398417 PER2O15055 1255 aa4.81□□□□□ -1.64
SMAD4-202ENST00000398417 ACOX3O15254 700 aa4.81□□□□□ -1.64
SMAD4-202ENST00000398417 EPN2O95208 641 aa4.81□□□□□ -1.64
SMAD4-202ENST00000398417 EBLN1P0CF75 366 aa4.81□□□□□ -1.64
SMAD4-202ENST00000398417 ARF5P84085 180 aa4.81□□□□□ -1.64
SMAD4-202ENST00000398417 FPGSQ05932 587 aa4.81□□□□□ -1.64
SMAD4-202ENST00000398417 ZNF846Q147U1 533 aa4.81□□□□□ -1.64
SMAD4-202ENST00000398417 SLC36A3Q495N2 470 aa4.81□□□□□ -1.64
SMAD4-202ENST00000398417 TTC23LQ6PF05 361 aa4.81□□□□□ -1.64
SMAD4-202ENST00000398417 R3HCC1LQ7Z5L2 792 aaKnown RBP4.81□□□□□ -1.64
SMAD4-202ENST00000398417 SNX29P2Q8IUI4 249 aa4.81□□□□□ -1.64
SMAD4-202ENST00000398417 SETD9Q8NE22 299 aa4.81□□□□□ -1.64
SMAD4-202ENST00000398417 PIK3C3Q8NEB9 887 aa4.81□□□□□ -1.64
SMAD4-202ENST00000398417 BPIFB1Q8TDL5 484 aa4.81□□□□□ -1.64
SMAD4-202ENST00000398417 MGME1Q9BQP7 344 aa4.81□□□□□ -1.64
SMAD4-202ENST00000398417 ATP13A3Q9H7F0 1226 aa4.81□□□□□ -1.64
SMAD4-202ENST00000398417 VAPAQ9P0L0 249 aa4.81□□□□□ -1.64
SMAD4-202ENST00000398417 PHF24Q9UPV7 400 aa4.81□□□□□ -1.64
SMAD4-202ENST00000398417 ABCA3Q99758 1704 aa4.81□□□□□ -1.64
SMAD4-202ENST00000398417 NUP205Q92621 2012 aa4.81□□□□□ -1.64
SMAD4-202ENST00000398417 C5orf58C9J3I9 102 aa4.81□□□□□ -1.64
SMAD4-202ENST00000398417 FPGTO14772 594 aa4.81□□□□□ -1.64
SMAD4-202ENST00000398417 INMTO95050 263 aa4.81□□□□□ -1.64
SMAD4-202ENST00000398417 ENO2P09104 434 aaPredicted RBP4.81□□□□□ -1.64
SMAD4-202ENST00000398417 POU2F1P14859 743 aa4.81□□□□□ -1.64
SMAD4-202ENST00000398417 CD247P20963 164 aa4.81□□□□□ -1.64
SMAD4-202ENST00000398417 TACR1P25103 407 aa4.81□□□□□ -1.64
SMAD4-202ENST00000398417 CD70P32970 193 aa4.81□□□□□ -1.64
SMAD4-202ENST00000398417 INHBEP58166 350 aa4.81□□□□□ -1.64
SMAD4-202ENST00000398417 ST8SIA6P61647 398 aa4.81□□□□□ -1.64
SMAD4-202ENST00000398417 MADCAM1Q13477 382 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms