RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 CTBSQ01459 385 aa17.87■□□□□ 0.45
CHRFAM7A-202ENST00000397827 INAQ16352 499 aa17.87■□□□□ 0.45
CHRFAM7A-202ENST00000397827 PTCHD3Q3KNS1 767 aa17.87■□□□□ 0.45
CHRFAM7A-202ENST00000397827 NEK5Q6P3R8 708 aa17.87■□□□□ 0.45
CHRFAM7A-202ENST00000397827 ERLEC1Q96DZ1 483 aa17.87■□□□□ 0.45
CHRFAM7A-202ENST00000397827 MCCC1Q96RQ3 725 aaPredicted RBP17.87■□□□□ 0.45
CHRFAM7A-202ENST00000397827 HPS4Q9NQG7 708 aa17.87■□□□□ 0.45
CHRFAM7A-202ENST00000397827 TBX21Q9UL17 535 aa17.87■□□□□ 0.45
CHRFAM7A-202ENST00000397827 CDH23Q9H251 3354 aa17.87■□□□□ 0.45
CHRFAM7A-202ENST00000397827 MYO7AQ13402 2215 aa17.87■□□□□ 0.45
CHRFAM7A-202ENST00000397827 ELOVL7A1L3X0 281 aa17.87■□□□□ 0.45
CHRFAM7A-202ENST00000397827 CCL16O15467 120 aa17.87■□□□□ 0.45
CHRFAM7A-202ENST00000397827 B4GAT1O43505 415 aa17.87■□□□□ 0.45
CHRFAM7A-202ENST00000397827 LRATO95237 230 aa17.87■□□□□ 0.45
CHRFAM7A-202ENST00000397827 ALBP02768 609 aa17.87■□□□□ 0.45
CHRFAM7A-202ENST00000397827 ITPKAP23677 461 aa17.87■□□□□ 0.45
CHRFAM7A-202ENST00000397827 RPS14P62263 151 aaKnown RBP17.87■□□□□ 0.45
CHRFAM7A-202ENST00000397827 RUNDC3AQ59EK9 446 aa17.87■□□□□ 0.45
CHRFAM7A-202ENST00000397827 ATG10Q9H0Y0 220 aa17.87■□□□□ 0.45
CHRFAM7A-202ENST00000397827 ELOVL6Q9H5J4 265 aa17.87■□□□□ 0.45
CHRFAM7A-202ENST00000397827 GORASP2Q9H8Y8 452 aa17.87■□□□□ 0.45
CHRFAM7A-202ENST00000397827 LTB4R2Q9NPC1 389 aa17.87■□□□□ 0.45
CHRFAM7A-202ENST00000397827 EBF1Q9UH73 591 aa17.87■□□□□ 0.45
CHRFAM7A-202ENST00000397827 SLC22A14Q9Y267 594 aa17.87■□□□□ 0.45
CHRFAM7A-202ENST00000397827 TRIM64CA6NLI5 447 aa17.86■□□□□ 0.45
CHRFAM7A-202ENST00000397827 CCL5P13501 91 aa17.86■□□□□ 0.45
CHRFAM7A-202ENST00000397827 S100A1P23297 94 aa17.86■□□□□ 0.45
CHRFAM7A-202ENST00000397827 ITGB8P26012 769 aa17.86■□□□□ 0.45
CHRFAM7A-202ENST00000397827 ELK4P28324 431 aa17.86■□□□□ 0.45
CHRFAM7A-202ENST00000397827 SPINT3P49223 89 aa17.86■□□□□ 0.45
CHRFAM7A-202ENST00000397827 ARHGEF6Q15052 776 aa17.86■□□□□ 0.45
CHRFAM7A-202ENST00000397827 CARD16Q5EG05 197 aa17.86■□□□□ 0.45
CHRFAM7A-202ENST00000397827 DCDC5Q6ZRR9 648 aa17.86■□□□□ 0.45
CHRFAM7A-202ENST00000397827 USP51Q70EK9 711 aa17.86■□□□□ 0.45
CHRFAM7A-202ENST00000397827 BEND7Q8N7W2 519 aaPredicted RBP17.86■□□□□ 0.45
CHRFAM7A-202ENST00000397827 OR10Q1Q8NGQ4 319 aa17.86■□□□□ 0.45
CHRFAM7A-202ENST00000397827 FAM162AQ96A26 154 aa17.86■□□□□ 0.45
CHRFAM7A-202ENST00000397827 EGLN2Q96KS0 407 aa17.86■□□□□ 0.45
CHRFAM7A-202ENST00000397827 CCDC115Q96NT0 180 aa17.86■□□□□ 0.45
CHRFAM7A-202ENST00000397827 YME1L1Q96TA2 773 aa17.86■□□□□ 0.45
CHRFAM7A-202ENST00000397827 P2RY13Q9BPV8 354 aa17.86■□□□□ 0.45
CHRFAM7A-202ENST00000397827 INPP5KQ9BT40 448 aa17.86■□□□□ 0.45
CHRFAM7A-202ENST00000397827 NDEL1Q9GZM8 345 aa17.86■□□□□ 0.45
CHRFAM7A-202ENST00000397827 PAIP1Q9H074 479 aaKnown RBP17.86■□□□□ 0.45
CHRFAM7A-202ENST00000397827 CDC14AQ9UNH5 594 aa17.86■□□□□ 0.45
CHRFAM7A-202ENST00000397827 RBMX2Q9Y388 322 aaKnown RBP17.86■□□□□ 0.45
CHRFAM7A-202ENST00000397827 TRIM64A6NGJ6 449 aa17.86■□□□□ 0.45
CHRFAM7A-202ENST00000397827 CXCR6O00574 342 aa17.86■□□□□ 0.45
CHRFAM7A-202ENST00000397827 PRAMEF4O60810 478 aa17.86■□□□□ 0.45
CHRFAM7A-202ENST00000397827 FGF18O76093 207 aa17.86■□□□□ 0.45
CHRFAM7A-202ENST00000397827 PRKD3O94806 890 aa17.86■□□□□ 0.45
CHRFAM7A-202ENST00000397827 ALPLP05186 524 aa17.86■□□□□ 0.45
CHRFAM7A-202ENST00000397827 HIST1H2AGP0C0S8 130 aaPredicted RBP17.86■□□□□ 0.45
CHRFAM7A-202ENST00000397827 HIST1H2ADP20671 130 aa17.86■□□□□ 0.45
CHRFAM7A-202ENST00000397827 ALDH3A2P51648 485 aa17.86■□□□□ 0.45
CHRFAM7A-202ENST00000397827 ESRRGP62508 458 aa17.86■□□□□ 0.45
CHRFAM7A-202ENST00000397827 SMU1Q2TAY7 513 aa17.86■□□□□ 0.45
CHRFAM7A-202ENST00000397827 PRAMEF9Q5VWM5 478 aa17.86■□□□□ 0.45
CHRFAM7A-202ENST00000397827 ANKRD34AQ69YU3 496 aa17.86■□□□□ 0.45
CHRFAM7A-202ENST00000397827 DHRS4L2Q6PKH6 230 aa17.86■□□□□ 0.45
CHRFAM7A-202ENST00000397827 NCLNQ969V3 563 aa17.86■□□□□ 0.45
CHRFAM7A-202ENST00000397827 HIST1H2AHQ96KK5 128 aa17.86■□□□□ 0.45
CHRFAM7A-202ENST00000397827 HIST1H2AJQ99878 128 aa17.86■□□□□ 0.45
CHRFAM7A-202ENST00000397827 H2AFJQ9BTM1 129 aa17.86■□□□□ 0.45
CHRFAM7A-202ENST00000397827 SLC12A9Q9BXP2 914 aa17.86■□□□□ 0.45
CHRFAM7A-202ENST00000397827 SLC29A3Q9BZD2 475 aa17.86■□□□□ 0.45
CHRFAM7A-202ENST00000397827 SMURF2Q9HAU4 748 aa17.86■□□□□ 0.45
CHRFAM7A-202ENST00000397827 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.86■□□□□ 0.45
CHRFAM7A-202ENST00000397827 PPIL1Q9Y3C6 166 aa17.86■□□□□ 0.45
CHRFAM7A-202ENST00000397827 IGLV3-16A0A075B6K0 115 aa17.85■□□□□ 0.45
CHRFAM7A-202ENST00000397827 PRSS23O95084 383 aa17.85■□□□□ 0.45
CHRFAM7A-202ENST00000397827 CST1P01037 141 aa17.85■□□□□ 0.45
CHRFAM7A-202ENST00000397827 CSF2RAP15509 400 aa17.85■□□□□ 0.45
CHRFAM7A-202ENST00000397827 MNX1P50219 401 aaPredicted RBP17.85■□□□□ 0.45
CHRFAM7A-202ENST00000397827 PTPN5P54829 565 aa17.85■□□□□ 0.45
CHRFAM7A-202ENST00000397827 CD300CQ08708 224 aa17.85■□□□□ 0.45
CHRFAM7A-202ENST00000397827 DAG1Q14118 895 aa17.85■□□□□ 0.45
CHRFAM7A-202ENST00000397827 ZNF648Q5T619 568 aaPredicted RBP17.85■□□□□ 0.45
CHRFAM7A-202ENST00000397827 DEPDC1Q5TB30 811 aa17.85■□□□□ 0.45
CHRFAM7A-202ENST00000397827 METTL2BQ6P1Q9 378 aaKnown RBP17.85■□□□□ 0.45
CHRFAM7A-202ENST00000397827 RNF165Q6ZSG1 346 aa17.85■□□□□ 0.45
CHRFAM7A-202ENST00000397827 ASB11Q8WXH4 323 aa17.85■□□□□ 0.45
CHRFAM7A-202ENST00000397827 ITPKCQ96DU7 683 aa17.85■□□□□ 0.45
CHRFAM7A-202ENST00000397827 SLC47A1Q96FL8 570 aa17.85■□□□□ 0.45
CHRFAM7A-202ENST00000397827 APIPQ96GX9 242 aa17.85■□□□□ 0.45
CHRFAM7A-202ENST00000397827 NPLQ9BXD5 320 aaPredicted RBP17.85■□□□□ 0.45
CHRFAM7A-202ENST00000397827 UGT2B28Q9BY64 529 aa17.85■□□□□ 0.45
CHRFAM7A-202ENST00000397827 KAT8Q9H7Z6 458 aaKnown RBP17.85■□□□□ 0.45
CHRFAM7A-202ENST00000397827 SLC25A13Q9UJS0 675 aa17.85■□□□□ 0.45
CHRFAM7A-202ENST00000397827 POP4O95707 220 aaKnown RBP17.85■□□□□ 0.45
CHRFAM7A-202ENST00000397827 ACRP10323 421 aa17.85■□□□□ 0.45
CHRFAM7A-202ENST00000397827 ATP1B2P14415 290 aaPredicted RBP17.85■□□□□ 0.45
CHRFAM7A-202ENST00000397827 PRMT2P55345 433 aa17.85■□□□□ 0.45
CHRFAM7A-202ENST00000397827 WDR5P61964 334 aaKnown RBP17.85■□□□□ 0.45
CHRFAM7A-202ENST00000397827 PMS2P3Q13401 168 aa17.85■□□□□ 0.45
CHRFAM7A-202ENST00000397827 PGS1Q32NB8 556 aa17.85■□□□□ 0.45
CHRFAM7A-202ENST00000397827 NECAB2Q7Z6G3 386 aa17.85■□□□□ 0.45
CHRFAM7A-202ENST00000397827 ZDHHC13Q8IUH4 622 aa17.85■□□□□ 0.45
CHRFAM7A-202ENST00000397827 TCEAL4Q96EI5 215 aa17.85■□□□□ 0.45
CHRFAM7A-202ENST00000397827 ZBP1Q9H171 429 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms