RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 TMEM135Q86UB9 458 aa14.7□□□□□ -0.06
NPHP4-201ENST00000378156 COMMD2Q86X83 199 aa14.7□□□□□ -0.06
NPHP4-201ENST00000378156 AQP12AQ8IXF9 295 aa14.7□□□□□ -0.06
NPHP4-201ENST00000378156 ADGRG2Q8IZP9 1017 aa14.7□□□□□ -0.06
NPHP4-201ENST00000378156 C2CD4AQ8NCU7 369 aaPredicted RBP14.7□□□□□ -0.06
NPHP4-201ENST00000378156 PXYLP1Q8TE99 480 aa14.7□□□□□ -0.06
NPHP4-201ENST00000378156 RAB2BQ8WUD1 216 aa14.7□□□□□ -0.06
NPHP4-201ENST00000378156 COL18A1P39060 1754 aa14.7□□□□□ -0.06
NPHP4-201ENST00000378156 PSMD11O00231 422 aa14.7□□□□□ -0.06
NPHP4-201ENST00000378156 SCELO95171 688 aa14.7□□□□□ -0.06
NPHP4-201ENST00000378156 FADS2O95864 444 aaKnown RBP14.7□□□□□ -0.06
NPHP4-201ENST00000378156 TRIM32Q13049 653 aa14.7□□□□□ -0.06
NPHP4-201ENST00000378156 PPP1R3AQ16821 1122 aa14.7□□□□□ -0.06
NPHP4-201ENST00000378156 LY6G5CQ5SRR4 150 aa14.7□□□□□ -0.06
NPHP4-201ENST00000378156 CYP2U1Q7Z449 544 aa14.7□□□□□ -0.06
NPHP4-201ENST00000378156 MEIOBQ8N635 442 aa14.7□□□□□ -0.06
NPHP4-201ENST00000378156 TEX47Q8TBZ9 253 aa14.7□□□□□ -0.06
NPHP4-201ENST00000378156 LMLNQ96KR4 655 aa14.7□□□□□ -0.06
NPHP4-201ENST00000378156 TRMT61BQ9BVS5 477 aaKnown RBP14.7□□□□□ -0.06
NPHP4-201ENST00000378156 GPN1Q9HCN4 374 aaPredicted RBP14.7□□□□□ -0.06
NPHP4-201ENST00000378156 MAT2BQ9NZL9 334 aa14.7□□□□□ -0.06
NPHP4-201ENST00000378156 N6AMT1Q9Y5N5 214 aa14.7□□□□□ -0.06
NPHP4-201ENST00000378156 FAM234BA2RU67 622 aa14.7□□□□□ -0.06
NPHP4-201ENST00000378156 ARHGEF33A8MVX0 844 aa14.7□□□□□ -0.06
NPHP4-201ENST00000378156 ARPC2O15144 300 aa14.7□□□□□ -0.06
NPHP4-201ENST00000378156 PSMA1P25786 263 aaKnown RBP14.7□□□□□ -0.06
NPHP4-201ENST00000378156 SDC2P34741 201 aa14.7□□□□□ -0.06
NPHP4-201ENST00000378156 MERTKQ12866 999 aa14.7□□□□□ -0.06
NPHP4-201ENST00000378156 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.7□□□□□ -0.06
NPHP4-201ENST00000378156 VANGL1Q8TAA9 524 aaPredicted RBP14.7□□□□□ -0.06
NPHP4-201ENST00000378156 WDR26Q9H7D7 661 aa14.7□□□□□ -0.06
NPHP4-201ENST00000378156 ITM2CQ9NQX7 267 aa14.7□□□□□ -0.06
NPHP4-201ENST00000378156 CLDND1Q9NY35 253 aa14.7□□□□□ -0.06
NPHP4-201ENST00000378156 SUCOQ9UBS9 1254 aaKnown RBP14.7□□□□□ -0.06
NPHP4-201ENST00000378156 A0A0D9SEW6 157 aa14.69□□□□□ -0.06
NPHP4-201ENST00000378156 HAS3O00219 553 aa14.69□□□□□ -0.06
NPHP4-201ENST00000378156 PTGESO14684 152 aa14.69□□□□□ -0.06
NPHP4-201ENST00000378156 COCHO43405 550 aa14.69□□□□□ -0.06
NPHP4-201ENST00000378156 TULP3O75386 442 aa14.69□□□□□ -0.06
NPHP4-201ENST00000378156 BCAS2O75934 225 aaPredicted RBP14.69□□□□□ -0.06
NPHP4-201ENST00000378156 SEMA3DO95025 777 aa14.69□□□□□ -0.06
NPHP4-201ENST00000378156 ETV4P43268 484 aa14.69□□□□□ -0.06
NPHP4-201ENST00000378156 AP1S2P56377 157 aa14.69□□□□□ -0.06
NPHP4-201ENST00000378156 KCTD8Q6ZWB6 473 aa14.69□□□□□ -0.06
NPHP4-201ENST00000378156 P2RY8Q86VZ1 359 aa14.69□□□□□ -0.06
NPHP4-201ENST00000378156 OSER1Q9NX31 292 aa14.69□□□□□ -0.06
NPHP4-201ENST00000378156 CASKO14936 926 aa14.69□□□□□ -0.06
NPHP4-201ENST00000378156 SLC25A12O75746 678 aa14.69□□□□□ -0.06
NPHP4-201ENST00000378156 UGT2B17O75795 530 aa14.69□□□□□ -0.06
NPHP4-201ENST00000378156 AKT2P31751 481 aa14.69□□□□□ -0.06
NPHP4-201ENST00000378156 RHDQ02161 417 aa14.69□□□□□ -0.06
NPHP4-201ENST00000378156 NIPAL4Q0D2K0 466 aa14.69□□□□□ -0.06
NPHP4-201ENST00000378156 NPWQ8N729 165 aa14.69□□□□□ -0.06
NPHP4-201ENST00000378156 PIH1D2Q8WWB5 315 aa14.69□□□□□ -0.06
NPHP4-201ENST00000378156 SLC9A6Q92581 669 aa14.69□□□□□ -0.06
NPHP4-201ENST00000378156 RTP4Q96DX8 246 aa14.69□□□□□ -0.06
NPHP4-201ENST00000378156 LRRC3Q9BY71 257 aa14.69□□□□□ -0.06
NPHP4-201ENST00000378156 NOBOXO60393 691 aa14.69□□□□□ -0.06
NPHP4-201ENST00000378156 ATP6V1G1O75348 118 aa14.69□□□□□ -0.06
NPHP4-201ENST00000378156 KHDRBS3O75525 346 aaKnown RBP14.69□□□□□ -0.06
NPHP4-201ENST00000378156 PAPSS2O95340 614 aaPredicted RBP14.69□□□□□ -0.06
NPHP4-201ENST00000378156 ANGPTL1O95841 491 aa14.69□□□□□ -0.06
NPHP4-201ENST00000378156 RPL26P61254 145 aaKnown RBP14.69□□□□□ -0.06
NPHP4-201ENST00000378156 ALG11Q2TAA5 492 aa14.69□□□□□ -0.06
NPHP4-201ENST00000378156 STEAP4Q687X5 459 aa14.69□□□□□ -0.06
NPHP4-201ENST00000378156 C22orf39Q6P5X5 142 aa14.69□□□□□ -0.06
NPHP4-201ENST00000378156 RNASE11Q8TAA1 199 aaKnown RBP14.69□□□□□ -0.06
NPHP4-201ENST00000378156 PTPN18Q99952 460 aa14.69□□□□□ -0.06
NPHP4-201ENST00000378156 ITGB4P16144 1822 aa14.69□□□□□ -0.06
NPHP4-201ENST00000378156 MEIS3P2A8K0S8 358 aa14.68□□□□□ -0.06
NPHP4-201ENST00000378156 MAGEB17A8MXT2 336 aa14.68□□□□□ -0.06
NPHP4-201ENST00000378156 LEFTY2O00292 366 aa14.68□□□□□ -0.06
NPHP4-201ENST00000378156 CXCR6O00574 342 aa14.68□□□□□ -0.06
NPHP4-201ENST00000378156 GJB5O95377 273 aa14.68□□□□□ -0.06
NPHP4-201ENST00000378156 CSF2RAP15509 400 aa14.68□□□□□ -0.06
NPHP4-201ENST00000378156 ZNF30P17039 623 aa14.68□□□□□ -0.06
NPHP4-201ENST00000378156 NT5EP21589 574 aa14.68□□□□□ -0.06
NPHP4-201ENST00000378156 GCAP28676 217 aa14.68□□□□□ -0.06
NPHP4-201ENST00000378156 TIE1P35590 1138 aa14.68□□□□□ -0.06
NPHP4-201ENST00000378156 GGT5P36269 586 aa14.68□□□□□ -0.06
NPHP4-201ENST00000378156 STC1P52823 247 aa14.68□□□□□ -0.06
NPHP4-201ENST00000378156 DGKQP52824 942 aa14.68□□□□□ -0.06
NPHP4-201ENST00000378156 PLA2G16P53816 162 aa14.68□□□□□ -0.06
NPHP4-201ENST00000378156 HSF2Q03933 536 aa14.68□□□□□ -0.06
NPHP4-201ENST00000378156 CYS1Q717R9 158 aa14.68□□□□□ -0.06
NPHP4-201ENST00000378156 FBXO27Q8NI29 283 aa14.68□□□□□ -0.06
NPHP4-201ENST00000378156 RASSF5Q8WWW0 418 aa14.68□□□□□ -0.06
NPHP4-201ENST00000378156 SRMSQ9H3Y6 488 aa14.68□□□□□ -0.06
NPHP4-201ENST00000378156 PRRC2BQ5JSZ5 2229 aaKnown RBP14.68□□□□□ -0.06
NPHP4-201ENST00000378156 UPK3BL1B0FP48 263 aa14.68□□□□□ -0.06
NPHP4-201ENST00000378156 UPK3BL2E5RIL1 263 aa14.68□□□□□ -0.06
NPHP4-201ENST00000378156 SLC35E2BP0CK96 405 aa14.68□□□□□ -0.06
NPHP4-201ENST00000378156 VIPR1P32241 457 aa14.68□□□□□ -0.06
NPHP4-201ENST00000378156 ACTR1BP42025 376 aa14.68□□□□□ -0.06
NPHP4-201ENST00000378156 ACTR1AP61163 376 aa14.68□□□□□ -0.06
NPHP4-201ENST00000378156 DPY19L1Q2PZI1 675 aa14.68□□□□□ -0.06
NPHP4-201ENST00000378156 UMODL1-AS1Q8N2C9 162 aa14.68□□□□□ -0.06
NPHP4-201ENST00000378156 PIK3R3Q92569 461 aa14.68□□□□□ -0.06
NPHP4-201ENST00000378156 SIPA1Q96FS4 1042 aa14.68□□□□□ -0.06
NPHP4-201ENST00000378156 NODALQ96S42 347 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms