RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 GRXCR1A8MXD5 290 aa11.87□□□□□ -0.51
C9orf3-203ENST00000375315 SLC16A6O15403 523 aa11.87□□□□□ -0.51
C9orf3-203ENST00000375315 HOXA2O43364 376 aa11.87□□□□□ -0.51
C9orf3-203ENST00000375315 PAGE1O75459 146 aa11.87□□□□□ -0.51
C9orf3-203ENST00000375315 TIMP1P01033 207 aa11.87□□□□□ -0.51
C9orf3-203ENST00000375315 CST1P01037 141 aa11.87□□□□□ -0.51
C9orf3-203ENST00000375315 PDGFAP04085 211 aa11.87□□□□□ -0.51
C9orf3-203ENST00000375315 ANXA6P08133 673 aa11.87□□□□□ -0.51
C9orf3-203ENST00000375315 COL6A1P12109 1028 aa11.87□□□□□ -0.51
C9orf3-203ENST00000375315 SRP54P61011 504 aaKnown RBP11.87□□□□□ -0.51
C9orf3-203ENST00000375315 CXCR4P61073 352 aa11.87□□□□□ -0.51
C9orf3-203ENST00000375315 STK11Q15831 433 aa11.87□□□□□ -0.51
C9orf3-203ENST00000375315 RAB41Q5JT25 222 aa11.87□□□□□ -0.51
C9orf3-203ENST00000375315 BLOC1S3Q6QNY0 202 aa11.87□□□□□ -0.51
C9orf3-203ENST00000375315 B3GNT8Q7Z7M8 397 aa11.87□□□□□ -0.51
C9orf3-203ENST00000375315 SLC22A9Q8IVM8 553 aa11.87□□□□□ -0.51
C9orf3-203ENST00000375315 ZNF567Q8N184 647 aa11.87□□□□□ -0.51
C9orf3-203ENST00000375315 CFAP52Q8N1V2 620 aa11.87□□□□□ -0.51
C9orf3-203ENST00000375315 FBLIM1Q8WUP2 373 aa11.87□□□□□ -0.51
C9orf3-203ENST00000375315 ZNF558Q96NG5 402 aa11.87□□□□□ -0.51
C9orf3-203ENST00000375315 NEDD4LQ96PU5 975 aa11.87□□□□□ -0.51
C9orf3-203ENST00000375315 CYP2S1Q96SQ9 504 aa11.87□□□□□ -0.51
C9orf3-203ENST00000375315 TM9SF2Q99805 663 aa11.87□□□□□ -0.51
C9orf3-203ENST00000375315 CDADC1Q9BWV3 514 aa11.87□□□□□ -0.51
C9orf3-203ENST00000375315 UCK2Q9BZX2 261 aa11.87□□□□□ -0.51
C9orf3-203ENST00000375315 FAM124BQ9H5Z6 455 aaPredicted RBP11.87□□□□□ -0.51
C9orf3-203ENST00000375315 PIF1Q9H611 641 aa11.87□□□□□ -0.51
C9orf3-203ENST00000375315 ELAC1Q9H777 363 aaKnown RBP11.87□□□□□ -0.51
C9orf3-203ENST00000375315 CSNK1G1Q9HCP0 422 aa11.87□□□□□ -0.51
C9orf3-203ENST00000375315 GKN1Q9NS71 199 aa11.87□□□□□ -0.51
C9orf3-203ENST00000375315 NDFIP2Q9NV92 336 aa11.87□□□□□ -0.51
C9orf3-203ENST00000375315 KLHL8Q9P2G9 620 aaPredicted RBP11.87□□□□□ -0.51
C9orf3-203ENST00000375315 SLC9A3R1O14745 358 aaPredicted RBP11.87□□□□□ -0.51
C9orf3-203ENST00000375315 SERPINI2O75830 405 aa11.87□□□□□ -0.51
C9orf3-203ENST00000375315 AP2A1O95782 977 aa11.87□□□□□ -0.51
C9orf3-203ENST00000375315 MYOGP15173 224 aa11.87□□□□□ -0.51
C9orf3-203ENST00000375315 CBLP22681 906 aa11.87□□□□□ -0.51
C9orf3-203ENST00000375315 ETV6P41212 452 aa11.87□□□□□ -0.51
C9orf3-203ENST00000375315 HCAR3P49019 387 aa11.87□□□□□ -0.51
C9orf3-203ENST00000375315 NPY2RP49146 381 aa11.87□□□□□ -0.51
C9orf3-203ENST00000375315 GLUD2P49448 558 aa11.87□□□□□ -0.51
C9orf3-203ENST00000375315 SLAMF1Q13291 335 aa11.87□□□□□ -0.51
C9orf3-203ENST00000375315 CREB3L2Q70SY1 520 aa11.87□□□□□ -0.51
C9orf3-203ENST00000375315 RPS27LQ71UM5 84 aaKnown RBP11.87□□□□□ -0.51
C9orf3-203ENST00000375315 CENPIQ92674 756 aaPredicted RBP11.87□□□□□ -0.51
C9orf3-203ENST00000375315 TMEM80Q96HE8 168 aa11.87□□□□□ -0.51
C9orf3-203ENST00000375315 FCRL2Q96LA5 508 aaPredicted RBP11.87□□□□□ -0.51
C9orf3-203ENST00000375315 C3orf30Q96M34 536 aa11.87□□□□□ -0.51
C9orf3-203ENST00000375315 TMEM74Q96NL1 305 aa11.87□□□□□ -0.51
C9orf3-203ENST00000375315 TOX2Q96NM4 488 aa11.87□□□□□ -0.51
C9orf3-203ENST00000375315 CWH43Q9H720 699 aa11.87□□□□□ -0.51
C9orf3-203ENST00000375315 CASS4Q9NQ75 786 aa11.87□□□□□ -0.51
C9orf3-203ENST00000375315 NUFIP1Q9UHK0 495 aaKnown RBP11.87□□□□□ -0.51
C9orf3-203ENST00000375315 STOML2Q9UJZ1 356 aa11.87□□□□□ -0.51
C9orf3-203ENST00000375315 AP3M1Q9Y2T2 418 aa11.87□□□□□ -0.51
C9orf3-203ENST00000375315 LCHNA4D1U4 455 aa11.86□□□□□ -0.51
C9orf3-203ENST00000375315 A8MX80 341 aa11.86□□□□□ -0.51
C9orf3-203ENST00000375315 H3BQ06 376 aaPredicted RBP11.86□□□□□ -0.51
C9orf3-203ENST00000375315 SYN3O14994 580 aa11.86□□□□□ -0.51
C9orf3-203ENST00000375315 GOT2P00505 430 aaKnown RBP11.86□□□□□ -0.51
C9orf3-203ENST00000375315 CXCL10P02778 98 aa11.86□□□□□ -0.51
C9orf3-203ENST00000375315 FTH1P02794 183 aa11.86□□□□□ -0.51
C9orf3-203ENST00000375315 CASP2P42575 452 aa11.86□□□□□ -0.51
C9orf3-203ENST00000375315 CTSKP43235 329 aa11.86□□□□□ -0.51
C9orf3-203ENST00000375315 KCNQ1P51787 676 aa11.86□□□□□ -0.51
C9orf3-203ENST00000375315 DSTNP60981 165 aa11.86□□□□□ -0.51
C9orf3-203ENST00000375315 B2MP61769 119 aa11.86□□□□□ -0.51
C9orf3-203ENST00000375315 CD83Q01151 205 aa11.86□□□□□ -0.51
C9orf3-203ENST00000375315 RAPSNQ13702 412 aa11.86□□□□□ -0.51
C9orf3-203ENST00000375315 CERCAMQ5T4B2 595 aa11.86□□□□□ -0.51
C9orf3-203ENST00000375315 PIK3R6Q5UE93 754 aa11.86□□□□□ -0.51
C9orf3-203ENST00000375315 RAP1GAP2Q684P5 730 aa11.86□□□□□ -0.51
C9orf3-203ENST00000375315 ARHGAP36Q6ZRI8 547 aa11.86□□□□□ -0.51
C9orf3-203ENST00000375315 EID3Q8N140 333 aa11.86□□□□□ -0.51
C9orf3-203ENST00000375315 NPWQ8N729 165 aa11.86□□□□□ -0.51
C9orf3-203ENST00000375315 SH3KBP1Q96B97 665 aa11.86□□□□□ -0.51
C9orf3-203ENST00000375315 SLC2A13Q96QE2 648 aa11.86□□□□□ -0.51
C9orf3-203ENST00000375315 C11orf84Q9BUA3 381 aaPredicted RBP11.86□□□□□ -0.51
C9orf3-203ENST00000375315 LRRC3Q9BY71 257 aa11.86□□□□□ -0.51
C9orf3-203ENST00000375315 ZC4H2Q9NQZ6 224 aa11.86□□□□□ -0.51
C9orf3-203ENST00000375315 SDR39U1Q9NRG7 319 aaPredicted RBP11.86□□□□□ -0.51
C9orf3-203ENST00000375315 TNFRSF10DQ9UBN6 386 aa11.86□□□□□ -0.51
C9orf3-203ENST00000375315 FBXW11Q9UKB1 542 aa11.86□□□□□ -0.51
C9orf3-203ENST00000375315 TBC1D24Q9ULP9 559 aa11.86□□□□□ -0.51
C9orf3-203ENST00000375315 KLHL20Q9Y2M5 609 aa11.86□□□□□ -0.51
C9orf3-203ENST00000375315 OR2A25A4D2G3 310 aa11.86□□□□□ -0.51
C9orf3-203ENST00000375315 TNFRSF10BO14763 440 aa11.86□□□□□ -0.51
C9orf3-203ENST00000375315 TFECO14948 347 aaPredicted RBP11.86□□□□□ -0.51
C9orf3-203ENST00000375315 FAM20BO75063 409 aa11.86□□□□□ -0.51
C9orf3-203ENST00000375315 SCO1O75880 301 aa11.86□□□□□ -0.51
C9orf3-203ENST00000375315 VNN2O95498 520 aa11.86□□□□□ -0.51
C9orf3-203ENST00000375315 AHSGP02765 367 aa11.86□□□□□ -0.51
C9orf3-203ENST00000375315 LBPP18428 481 aa11.86□□□□□ -0.51
C9orf3-203ENST00000375315 PLK1P53350 603 aa11.86□□□□□ -0.51
C9orf3-203ENST00000375315 OR4D2P58180 307 aa11.86□□□□□ -0.51
C9orf3-203ENST00000375315 ARMCX4Q5H9R4 360 aa11.86□□□□□ -0.51
C9orf3-203ENST00000375315 ZNF697Q5TEC3 545 aa11.86□□□□□ -0.51
C9orf3-203ENST00000375315 CYHR1Q6ZMK1 362 aa11.86□□□□□ -0.51
C9orf3-203ENST00000375315 ANKS3Q6ZW76 656 aa11.86□□□□□ -0.51
C9orf3-203ENST00000375315 C16orf59Q7L2K0 433 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms