RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 MED16Q9Y2X0 877 aa13.13□□□□□ -0.31
TNFRSF1A-202ENST00000366159 NBASA2RRP1 2371 aa13.13□□□□□ -0.31
TNFRSF1A-202ENST00000366159 FITM1A5D6W6 292 aa13.13□□□□□ -0.31
TNFRSF1A-202ENST00000366159 KRT87PA6NCN2 255 aa13.13□□□□□ -0.31
TNFRSF1A-202ENST00000366159 SDR42E2A6NKP2 422 aa13.13□□□□□ -0.31
TNFRSF1A-202ENST00000366159 H3BMM5 538 aa13.13□□□□□ -0.31
TNFRSF1A-202ENST00000366159 CCNFP41002 786 aa13.13□□□□□ -0.31
TNFRSF1A-202ENST00000366159 GRIA3P42263 894 aa13.13□□□□□ -0.31
TNFRSF1A-202ENST00000366159 BDKRB1P46663 353 aa13.13□□□□□ -0.31
TNFRSF1A-202ENST00000366159 CCL11P51671 97 aa13.13□□□□□ -0.31
TNFRSF1A-202ENST00000366159 CLCN7P51798 805 aa13.13□□□□□ -0.31
TNFRSF1A-202ENST00000366159 CYP2A13Q16696 494 aa13.13□□□□□ -0.31
TNFRSF1A-202ENST00000366159 NKAIN1Q4KMZ8 207 aa13.13□□□□□ -0.31
TNFRSF1A-202ENST00000366159 C1orf189Q5VU69 101 aa13.13□□□□□ -0.31
TNFRSF1A-202ENST00000366159 NEPROQ6NW34 567 aa13.13□□□□□ -0.31
TNFRSF1A-202ENST00000366159 CCDC137Q6PK04 289 aaKnown RBP13.13□□□□□ -0.31
TNFRSF1A-202ENST00000366159 TMEM151BQ8IW70 566 aa13.13□□□□□ -0.31
TNFRSF1A-202ENST00000366159 NAT8LQ8N9F0 302 aa13.13□□□□□ -0.31
TNFRSF1A-202ENST00000366159 TEX19Q8NA77 164 aa13.13□□□□□ -0.31
TNFRSF1A-202ENST00000366159 OR2A1Q8NGT9 310 aa13.13□□□□□ -0.31
TNFRSF1A-202ENST00000366159 ACTRT1Q8TDG2 376 aa13.13□□□□□ -0.31
TNFRSF1A-202ENST00000366159 SIGLEC10Q96LC7 697 aa13.13□□□□□ -0.31
TNFRSF1A-202ENST00000366159 SLC25A23Q9BV35 468 aa13.13□□□□□ -0.31
TNFRSF1A-202ENST00000366159 ACSS2Q9NR19 701 aa13.13□□□□□ -0.31
TNFRSF1A-202ENST00000366159 INTS10Q9NVR2 710 aaKnown RBP13.13□□□□□ -0.31
TNFRSF1A-202ENST00000366159 IL1RAPL1Q9NZN1 696 aa13.13□□□□□ -0.31
TNFRSF1A-202ENST00000366159 SLC39A10Q9ULF5 831 aa13.13□□□□□ -0.31
TNFRSF1A-202ENST00000366159 CRYL1Q9Y2S2 319 aa13.13□□□□□ -0.31
TNFRSF1A-202ENST00000366159 PCDHGB7Q9Y5F8 929 aa13.13□□□□□ -0.31
TNFRSF1A-202ENST00000366159 MRFAP1Q9Y605 127 aa13.13□□□□□ -0.31
TNFRSF1A-202ENST00000366159 CCDC88CQ9P219 2028 aa13.12□□□□□ -0.31
TNFRSF1A-202ENST00000366159 C9J4A7 227 aa13.12□□□□□ -0.31
TNFRSF1A-202ENST00000366159 NRDCO43847 1150 aa13.12□□□□□ -0.31
TNFRSF1A-202ENST00000366159 CTSVO60911 334 aa13.12□□□□□ -0.31
TNFRSF1A-202ENST00000366159 PSIP1O75475 530 aaKnown RBP13.12□□□□□ -0.31
TNFRSF1A-202ENST00000366159 UMODP07911 640 aa13.12□□□□□ -0.31
TNFRSF1A-202ENST00000366159 CD63P08962 238 aa13.12□□□□□ -0.31
TNFRSF1A-202ENST00000366159 PKMP14618 531 aaKnown RBP13.12□□□□□ -0.31
TNFRSF1A-202ENST00000366159 TERF1P54274 439 aa13.12□□□□□ -0.31
TNFRSF1A-202ENST00000366159 ATP1A4Q13733 1029 aa13.12□□□□□ -0.31
TNFRSF1A-202ENST00000366159 DHX34Q14147 1143 aaKnown RBP13.12□□□□□ -0.31
TNFRSF1A-202ENST00000366159 SF1Q15637 639 aaKnown RBP13.12□□□□□ -0.31
TNFRSF1A-202ENST00000366159 MLIPQ5VWP3 458 aa13.12□□□□□ -0.31
TNFRSF1A-202ENST00000366159 ZNF549Q6P9A3 640 aa13.12□□□□□ -0.31
TNFRSF1A-202ENST00000366159 TTC23LQ6PF05 361 aa13.12□□□□□ -0.31
TNFRSF1A-202ENST00000366159 TAX1BP1Q86VP1 789 aa13.12□□□□□ -0.31
TNFRSF1A-202ENST00000366159 FDCSPQ8NFU4 85 aa13.12□□□□□ -0.31
TNFRSF1A-202ENST00000366159 OR2L3Q8NG85 312 aa13.12□□□□□ -0.31
TNFRSF1A-202ENST00000366159 OR2Y1Q8NGV0 311 aa13.12□□□□□ -0.31
TNFRSF1A-202ENST00000366159 OSBPL9Q96SU4 736 aa13.12□□□□□ -0.31
TNFRSF1A-202ENST00000366159 SLC30A3Q99726 388 aa13.12□□□□□ -0.31
TNFRSF1A-202ENST00000366159 NUDT9Q9BW91 350 aa13.12□□□□□ -0.31
TNFRSF1A-202ENST00000366159 XAB2Q9HCS7 855 aaKnown RBP13.12□□□□□ -0.31
TNFRSF1A-202ENST00000366159 SPATA7Q9P0W8 599 aa13.12□□□□□ -0.31
TNFRSF1A-202ENST00000366159 KLHL42Q9P2K6 505 aa13.12□□□□□ -0.31
TNFRSF1A-202ENST00000366159 PADI2Q9Y2J8 665 aa13.12□□□□□ -0.31
TNFRSF1A-202ENST00000366159 PTPN13Q12923 2485 aa13.11□□□□□ -0.31
TNFRSF1A-202ENST00000366159 ARHGEF33A8MVX0 844 aa13.11□□□□□ -0.31
TNFRSF1A-202ENST00000366159 MYO1CO00159 1063 aa13.11□□□□□ -0.31
TNFRSF1A-202ENST00000366159 PGRMC1O00264 195 aaKnown RBP13.11□□□□□ -0.31
TNFRSF1A-202ENST00000366159 CES2O00748 559 aa13.11□□□□□ -0.31
TNFRSF1A-202ENST00000366159 PFDN6O15212 129 aa13.11□□□□□ -0.31
TNFRSF1A-202ENST00000366159 PHF2O75151 1096 aa13.11□□□□□ -0.31
TNFRSF1A-202ENST00000366159 SORBS2O94875 1100 aaKnown RBP13.11□□□□□ -0.31
TNFRSF1A-202ENST00000366159 PAMP19021 973 aa13.11□□□□□ -0.31
TNFRSF1A-202ENST00000366159 PSMB5P28074 263 aa13.11□□□□□ -0.31
TNFRSF1A-202ENST00000366159 FNTAP49354 379 aa13.11□□□□□ -0.31
TNFRSF1A-202ENST00000366159 PGDP52209 483 aa13.11□□□□□ -0.31
TNFRSF1A-202ENST00000366159 ARSFP54793 590 aa13.11□□□□□ -0.31
TNFRSF1A-202ENST00000366159 SOX8P57073 446 aa13.11□□□□□ -0.31
TNFRSF1A-202ENST00000366159 FOXL2P58012 376 aa13.11□□□□□ -0.31
TNFRSF1A-202ENST00000366159 YBX1P67809 324 aaKnown RBP13.11□□□□□ -0.31
TNFRSF1A-202ENST00000366159 SRSF1Q07955 248 aaKnown RBP eCLIP13.11□□□□□ -0.31
TNFRSF1A-202ENST00000366159 FASTKQ14296 549 aaKnown RBP13.11□□□□□ -0.31
TNFRSF1A-202ENST00000366159 ACSBG2Q5FVE4 666 aa13.11□□□□□ -0.31
TNFRSF1A-202ENST00000366159 ZC3H12BQ5HYM0 836 aaKnown RBP13.11□□□□□ -0.31
TNFRSF1A-202ENST00000366159 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.11□□□□□ -0.31
TNFRSF1A-202ENST00000366159 TCTE1Q5JU00 501 aa13.11□□□□□ -0.31
TNFRSF1A-202ENST00000366159 CNSTQ6PJW8 725 aa13.11□□□□□ -0.31
TNFRSF1A-202ENST00000366159 COX15Q7KZN9 410 aa13.11□□□□□ -0.31
TNFRSF1A-202ENST00000366159 MRGPREQ86SM8 312 aa13.11□□□□□ -0.31
TNFRSF1A-202ENST00000366159 RAB43Q86YS6 212 aa13.11□□□□□ -0.31
TNFRSF1A-202ENST00000366159 SLC35F6Q8N357 371 aa13.11□□□□□ -0.31
TNFRSF1A-202ENST00000366159 GIMAP7Q8NHV1 300 aa13.11□□□□□ -0.31
TNFRSF1A-202ENST00000366159 GSDMBQ8TAX9 411 aa13.11□□□□□ -0.31
TNFRSF1A-202ENST00000366159 MAGEC3Q8TD91 643 aa13.11□□□□□ -0.31
TNFRSF1A-202ENST00000366159 DLG3Q92796 817 aa13.11□□□□□ -0.31
TNFRSF1A-202ENST00000366159 PTERQ96BW5 349 aa13.11□□□□□ -0.31
TNFRSF1A-202ENST00000366159 FOPNLQ96NB1 174 aa13.11□□□□□ -0.31
TNFRSF1A-202ENST00000366159 IP6K3Q96PC2 410 aa13.11□□□□□ -0.31
TNFRSF1A-202ENST00000366159 NAP1L3Q99457 506 aaPredicted RBP13.11□□□□□ -0.31
TNFRSF1A-202ENST00000366159 SMAD5Q99717 465 aaKnown RBP13.11□□□□□ -0.31
TNFRSF1A-202ENST00000366159 NDC1Q9BTX1 674 aa13.11□□□□□ -0.31
TNFRSF1A-202ENST00000366159 SLC26A1Q9H2B4 701 aa13.11□□□□□ -0.31
TNFRSF1A-202ENST00000366159 TXLNGQ9NUQ3 528 aa13.11□□□□□ -0.31
TNFRSF1A-202ENST00000366159 INTS7Q9NVH2 962 aaKnown RBP13.11□□□□□ -0.31
TNFRSF1A-202ENST00000366159 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.11□□□□□ -0.31
TNFRSF1A-202ENST00000366159 IFT80Q9P2H3 777 aaPredicted RBP13.11□□□□□ -0.31
TNFRSF1A-202ENST00000366159 PLAAQ9Y263 795 aa13.11□□□□□ -0.31
TNFRSF1A-202ENST00000366159 LRRK2Q5S007 2527 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms