RNA–Protein interactions for RNA: ENST00000361781.6

SGMS1-202, Transcript of sphingomyelin synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGMS1, Length 3,744 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-202ENST00000361781 GDF6Q6KF10 455 aaPredicted RBP13.35□□□□□ -0.27
SGMS1-202ENST00000361781 TICAM1Q8IUC6 712 aa13.35□□□□□ -0.27
SGMS1-202ENST00000361781 CHDHQ8NE62 594 aaPredicted RBP13.35□□□□□ -0.27
SGMS1-202ENST00000361781 ZNF641Q96N77 438 aaPredicted RBP13.35□□□□□ -0.27
SGMS1-202ENST00000361781 ATOH8Q96SQ7 321 aa13.35□□□□□ -0.27
SGMS1-202ENST00000361781 TIGARQ9NQ88 270 aa13.35□□□□□ -0.27
SGMS1-202ENST00000361781 ITGB1BP2Q9UKP3 347 aa13.35□□□□□ -0.27
SGMS1-202ENST00000361781 CACNA1CQ13936 2221 aa13.35□□□□□ -0.27
SGMS1-202ENST00000361781 NRAPQ86VF7 1730 aa13.35□□□□□ -0.27
SGMS1-202ENST00000361781 FAM220BPB1ANY3 271 aa13.34□□□□□ -0.27
SGMS1-202ENST00000361781 CAPN15O75808 1086 aa13.34□□□□□ -0.27
SGMS1-202ENST00000361781 ANXA4P09525 319 aaPredicted RBP13.34□□□□□ -0.27
SGMS1-202ENST00000361781 GSTM2P28161 218 aa13.34□□□□□ -0.27
SGMS1-202ENST00000361781 EMP3P54852 163 aa13.34□□□□□ -0.27
SGMS1-202ENST00000361781 EMX1Q04741 257 aaPredicted RBP13.34□□□□□ -0.27
SGMS1-202ENST00000361781 CACNG1Q06432 222 aa13.34□□□□□ -0.27
SGMS1-202ENST00000361781 DSC3Q14574 896 aa13.34□□□□□ -0.27
SGMS1-202ENST00000361781 UPP1Q16831 310 aa13.34□□□□□ -0.27
SGMS1-202ENST00000361781 OR4A15Q8NGL6 344 aa13.34□□□□□ -0.27
SGMS1-202ENST00000361781 OR2T11Q8NH01 316 aa13.34□□□□□ -0.27
SGMS1-202ENST00000361781 RHEBL1Q8TAI7 183 aa13.34□□□□□ -0.27
SGMS1-202ENST00000361781 BRI3BPQ8WY22 251 aa13.34□□□□□ -0.27
SGMS1-202ENST00000361781 HSH2DQ96JZ2 352 aa13.34□□□□□ -0.27
SGMS1-202ENST00000361781 MRM3Q9HC36 420 aaKnown RBP13.34□□□□□ -0.27
SGMS1-202ENST00000361781 ZC4H2Q9NQZ6 224 aa13.34□□□□□ -0.27
SGMS1-202ENST00000361781 COL16A1Q07092 1604 aaPredicted RBP13.34□□□□□ -0.27
SGMS1-202ENST00000361781 FXYD1O00168 92 aa13.34□□□□□ -0.27
SGMS1-202ENST00000361781 NDUFB5O43674 189 aa13.34□□□□□ -0.27
SGMS1-202ENST00000361781 PSIP1O75475 530 aaKnown RBP13.34□□□□□ -0.27
SGMS1-202ENST00000361781 IFI30P13284 250 aa13.34□□□□□ -0.27
SGMS1-202ENST00000361781 DCKP27707 260 aa13.34□□□□□ -0.27
SGMS1-202ENST00000361781 IDUAP35475 653 aa13.34□□□□□ -0.27
SGMS1-202ENST00000361781 TGFBR1P36897 503 aa13.34□□□□□ -0.27
SGMS1-202ENST00000361781 ATN1P54259 1190 aaPredicted RBP13.34□□□□□ -0.27
SGMS1-202ENST00000361781 OR2B6P58173 313 aa13.34□□□□□ -0.27
SGMS1-202ENST00000361781 SRP54P61011 504 aaKnown RBP13.34□□□□□ -0.27
SGMS1-202ENST00000361781 PHC1P78364 1004 aa13.34□□□□□ -0.27
SGMS1-202ENST00000361781 ANKRD13BQ86YJ7 626 aa13.34□□□□□ -0.27
SGMS1-202ENST00000361781 CNTN4Q8IWV2 1026 aa13.34□□□□□ -0.27
SGMS1-202ENST00000361781 HMGCLL1Q8TB92 370 aa13.34□□□□□ -0.27
SGMS1-202ENST00000361781 NT5C3BQ969T7 300 aa13.34□□□□□ -0.27
SGMS1-202ENST00000361781 EGLN2Q96KS0 407 aa13.34□□□□□ -0.27
SGMS1-202ENST00000361781 ART5Q96L15 291 aa13.34□□□□□ -0.27
SGMS1-202ENST00000361781 INPP5KQ9BT40 448 aa13.34□□□□□ -0.27
SGMS1-202ENST00000361781 ATP6V1HQ9UI12 483 aa13.34□□□□□ -0.27
SGMS1-202ENST00000361781 CCDC182A6NF36 153 aa13.34□□□□□ -0.27
SGMS1-202ENST00000361781 TARM1B6A8C7 271 aa13.34□□□□□ -0.27
SGMS1-202ENST00000361781 APOL3O95236 402 aa13.34□□□□□ -0.27
SGMS1-202ENST00000361781 SOX14O95416 240 aa13.34□□□□□ -0.27
SGMS1-202ENST00000361781 BCKDHAP12694 445 aa13.34□□□□□ -0.27
SGMS1-202ENST00000361781 PFKLP17858 780 aa13.34□□□□□ -0.27
SGMS1-202ENST00000361781 RGRP47804 291 aa13.34□□□□□ -0.27
SGMS1-202ENST00000361781 RPP38P78345 283 aaKnown RBP13.34□□□□□ -0.27
SGMS1-202ENST00000361781 IL18R1Q13478 541 aa13.34□□□□□ -0.27
SGMS1-202ENST00000361781 HKDC1Q2TB90 917 aa13.34□□□□□ -0.27
SGMS1-202ENST00000361781 TIMM50Q3ZCQ8 353 aa13.34□□□□□ -0.27
SGMS1-202ENST00000361781 FAM180BQ6P0A1 224 aa13.34□□□□□ -0.27
SGMS1-202ENST00000361781 RNF175Q8N4F7 328 aa13.34□□□□□ -0.27
SGMS1-202ENST00000361781 YIPF2Q9BWQ6 316 aa13.34□□□□□ -0.27
SGMS1-202ENST00000361781 SLC2A11Q9BYW1 496 aa13.34□□□□□ -0.27
SGMS1-202ENST00000361781 RNF38Q9H0F5 515 aa13.34□□□□□ -0.27
SGMS1-202ENST00000361781 CLN6Q9NWW5 311 aa13.34□□□□□ -0.27
SGMS1-202ENST00000361781 RNF6Q9Y252 685 aa13.34□□□□□ -0.27
SGMS1-202ENST00000361781 MUSKO15146 869 aa13.33□□□□□ -0.28
SGMS1-202ENST00000361781 CLDN11O75508 207 aa13.33□□□□□ -0.28
SGMS1-202ENST00000361781 MATN4O95460 622 aa13.33□□□□□ -0.28
SGMS1-202ENST00000361781 SERPINA4P29622 427 aa13.33□□□□□ -0.28
SGMS1-202ENST00000361781 IFNA8P32881 189 aa13.33□□□□□ -0.28
SGMS1-202ENST00000361781 RAB15P59190 212 aa13.33□□□□□ -0.28
SGMS1-202ENST00000361781 CD83Q01151 205 aa13.33□□□□□ -0.28
SGMS1-202ENST00000361781 ZNF33AQ06730 810 aa13.33□□□□□ -0.28
SGMS1-202ENST00000361781 SEMA3BQ13214 749 aa13.33□□□□□ -0.28
SGMS1-202ENST00000361781 CDK5R2Q13319 367 aa13.33□□□□□ -0.28
SGMS1-202ENST00000361781 RNASE12Q5GAN4 147 aaKnown RBP13.33□□□□□ -0.28
SGMS1-202ENST00000361781 TMPRSS11BQ86T26 416 aa13.33□□□□□ -0.28
SGMS1-202ENST00000361781 MAL2Q969L2 176 aa13.33□□□□□ -0.28
SGMS1-202ENST00000361781 DIRAS2Q96HU8 199 aa13.33□□□□□ -0.28
SGMS1-202ENST00000361781 MAGEH1Q9H213 219 aa13.33□□□□□ -0.28
SGMS1-202ENST00000361781 ZBTB20Q9HC78 741 aaPredicted RBP13.33□□□□□ -0.28
SGMS1-202ENST00000361781 PCDHA9Q9Y5H5 950 aa13.33□□□□□ -0.28
SGMS1-202ENST00000361781 A0A096LPI6 279 aa13.33□□□□□ -0.28
SGMS1-202ENST00000361781 FGF4P08620 206 aa13.33□□□□□ -0.28
SGMS1-202ENST00000361781 STSP08842 583 aa13.33□□□□□ -0.28
SGMS1-202ENST00000361781 C21orf33P30042 268 aaPredicted RBP13.33□□□□□ -0.28
SGMS1-202ENST00000361781 RCVRNP35243 200 aa13.33□□□□□ -0.28
SGMS1-202ENST00000361781 CHRNA6Q15825 494 aa13.33□□□□□ -0.28
SGMS1-202ENST00000361781 HIST2H2ACQ16777 129 aaPredicted RBP13.33□□□□□ -0.28
SGMS1-202ENST00000361781 HIST2H2AA3Q6FI13 130 aa13.33□□□□□ -0.28
SGMS1-202ENST00000361781 CYP2U1Q7Z449 544 aa13.33□□□□□ -0.28
SGMS1-202ENST00000361781 CYP4Z1Q86W10 505 aa13.33□□□□□ -0.28
SGMS1-202ENST00000361781 UMODL1-AS1Q8N2C9 162 aa13.33□□□□□ -0.28
SGMS1-202ENST00000361781 TUBA1CQ9BQE3 449 aa13.33□□□□□ -0.28
SGMS1-202ENST00000361781 C2orf49Q9BVC5 232 aaPredicted RBP13.33□□□□□ -0.28
SGMS1-202ENST00000361781 SGK2Q9HBY8 427 aa13.33□□□□□ -0.28
SGMS1-202ENST00000361781 CLEC4AQ9UMR7 237 aa13.33□□□□□ -0.28
SGMS1-202ENST00000361781 ASB1Q9Y576 335 aa13.33□□□□□ -0.28
SGMS1-202ENST00000361781 PCDHB14Q9Y5E9 798 aa13.33□□□□□ -0.28
SGMS1-202ENST00000361781 ASCC3Q8N3C0 2202 aaKnown RBP13.33□□□□□ -0.28
SGMS1-202ENST00000361781 KIF13BQ9NQT8 1826 aa13.33□□□□□ -0.28
SGMS1-202ENST00000361781 PLOD3O60568 738 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms