RNA–Protein interactions for RNA: ENST00000355815.8

SREBF1-202, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SREBF1, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-202ENST00000355815 KCNC1P48547 511 aa13.76□□□□□ -0.21
SREBF1-202ENST00000355815 UNC50Q53HI1 259 aa13.76□□□□□ -0.21
SREBF1-202ENST00000355815 ZNF678Q5SXM1 525 aa13.76□□□□□ -0.21
SREBF1-202ENST00000355815 VANGL1Q8TAA9 524 aaPredicted RBP13.76□□□□□ -0.21
SREBF1-202ENST00000355815 ING5Q8WYH8 240 aa13.76□□□□□ -0.21
SREBF1-202ENST00000355815 MYO19Q96H55 970 aa13.76□□□□□ -0.21
SREBF1-202ENST00000355815 GSDMCQ9BYG8 508 aa13.76□□□□□ -0.21
SREBF1-202ENST00000355815 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.76□□□□□ -0.212e-6■■■□□ 18.6
SREBF1-202ENST00000355815 MAGEH1Q9H213 219 aa13.76□□□□□ -0.21
SREBF1-202ENST00000355815 SCML2Q9UQR0 700 aa13.76□□□□□ -0.21
SREBF1-202ENST00000355815 DNAJC15Q9Y5T4 150 aa13.76□□□□□ -0.21
SREBF1-202ENST00000355815 PEX16Q9Y5Y5 336 aa13.76□□□□□ -0.21
SREBF1-202ENST00000355815 A0A1B0GVM2 712 aa13.76□□□□□ -0.21
SREBF1-202ENST00000355815 TCAF2A6NFQ2 919 aa13.76□□□□□ -0.21
SREBF1-202ENST00000355815 CPOXP36551 454 aa13.76□□□□□ -0.21
SREBF1-202ENST00000355815 OGFRL1Q5TC84 451 aaPredicted RBP13.76□□□□□ -0.21
SREBF1-202ENST00000355815 ISCA2Q86U28 154 aa13.76□□□□□ -0.21
SREBF1-202ENST00000355815 OR52B6Q8NGF0 335 aa13.76□□□□□ -0.21
SREBF1-202ENST00000355815 CNIH3Q8TBE1 160 aa13.76□□□□□ -0.21
SREBF1-202ENST00000355815 PPP3R2Q96LZ3 170 aa13.76□□□□□ -0.21
SREBF1-202ENST00000355815 CTPS2Q9NRF8 586 aa13.76□□□□□ -0.21
SREBF1-202ENST00000355815 MRPL17Q9NRX2 175 aaKnown RBP13.76□□□□□ -0.21
SREBF1-202ENST00000355815 ANKDD1BA6NHY2 528 aa13.75□□□□□ -0.21
SREBF1-202ENST00000355815 ANKRD66B4E2M5 251 aa13.75□□□□□ -0.21
SREBF1-202ENST00000355815 SLC22A1O15245 554 aa13.75□□□□□ -0.21
SREBF1-202ENST00000355815 CSKP41240 450 aa13.75□□□□□ -0.21
SREBF1-202ENST00000355815 SUZ12Q15022 739 aaKnown RBP13.75□□□□□ -0.21
SREBF1-202ENST00000355815 HIST2H2ACQ16777 129 aaPredicted RBP13.75□□□□□ -0.21
SREBF1-202ENST00000355815 USP39Q53GS9 565 aaKnown RBP13.75□□□□□ -0.21
SREBF1-202ENST00000355815 HIST2H2AA3Q6FI13 130 aa13.75□□□□□ -0.21
SREBF1-202ENST00000355815 CCBE1Q6UXH8 406 aaPredicted RBP13.75□□□□□ -0.21
SREBF1-202ENST00000355815 DEF8Q6ZN54 512 aa13.75□□□□□ -0.21
SREBF1-202ENST00000355815 ADAMTSL2Q86TH1 951 aa13.75□□□□□ -0.21
SREBF1-202ENST00000355815 AURKBQ96GD4 344 aaPredicted RBP13.75□□□□□ -0.21
SREBF1-202ENST00000355815 COPS8Q99627 209 aa13.75□□□□□ -0.21
SREBF1-202ENST00000355815 OSGEPL1Q9H4B0 414 aa13.75□□□□□ -0.21
SREBF1-202ENST00000355815 SPO11Q9Y5K1 396 aa13.75□□□□□ -0.21
SREBF1-202ENST00000355815 CROCCQ5TZA2 2017 aa13.75□□□□□ -0.21
SREBF1-202ENST00000355815 NEDD8-MDP1E9PL57 170 aa13.75□□□□□ -0.21
SREBF1-202ENST00000355815 UGT2B11O75310 529 aa13.75□□□□□ -0.21
SREBF1-202ENST00000355815 CLK3P49761 638 aaKnown RBP13.75□□□□□ -0.21
SREBF1-202ENST00000355815 ACOX1Q15067 660 aa13.75□□□□□ -0.21
SREBF1-202ENST00000355815 ZMYND11Q15326 602 aa13.75□□□□□ -0.21
SREBF1-202ENST00000355815 AMIGO1Q86WK6 493 aa13.75□□□□□ -0.21
SREBF1-202ENST00000355815 TRAPPC5Q8IUR0 188 aa13.75□□□□□ -0.21
SREBF1-202ENST00000355815 TMEM159Q96B96 161 aa13.75□□□□□ -0.21
SREBF1-202ENST00000355815 TDRD1Q9BXT4 1180 aaKnown RBP13.75□□□□□ -0.21
SREBF1-202ENST00000355815 SNX7Q9UNH6 387 aa13.75□□□□□ -0.21
SREBF1-202ENST00000355815 C2orf78A6NCI8 922 aa13.75□□□□□ -0.21
SREBF1-202ENST00000355815 SCAMP1O15126 338 aa13.75□□□□□ -0.21
SREBF1-202ENST00000355815 INMTO95050 263 aa13.75□□□□□ -0.21
SREBF1-202ENST00000355815 OTCP00480 354 aa13.75□□□□□ -0.21
SREBF1-202ENST00000355815 INHAP05111 366 aa13.75□□□□□ -0.21
SREBF1-202ENST00000355815 RPLP2P05387 115 aaKnown RBP13.75□□□□□ -0.21
SREBF1-202ENST00000355815 CDH12P55289 794 aa13.75□□□□□ -0.21
SREBF1-202ENST00000355815 RPL6Q02878 288 aaKnown RBP13.75□□□□□ -0.21
SREBF1-202ENST00000355815 UGT8Q16880 541 aa13.75□□□□□ -0.21
SREBF1-202ENST00000355815 ZNF404Q494X3 552 aa13.75□□□□□ -0.21
SREBF1-202ENST00000355815 CST9Q5W186 159 aa13.75□□□□□ -0.21
SREBF1-202ENST00000355815 MBOAT1Q6ZNC8 495 aa13.75□□□□□ -0.21
SREBF1-202ENST00000355815 RBM23Q86U06 439 aaKnown RBP13.75□□□□□ -0.21
SREBF1-202ENST00000355815 FAM9CQ8IZT9 166 aa13.75□□□□□ -0.21
SREBF1-202ENST00000355815 MSANTD3Q96H12 275 aa13.75□□□□□ -0.21
SREBF1-202ENST00000355815 FUBP3Q96I24 572 aaKnown RBP eCLIP13.75□□□□□ -0.21
SREBF1-202ENST00000355815 LRCH3Q96II8 777 aa13.75□□□□□ -0.21
SREBF1-202ENST00000355815 ZFP3Q96NJ6 502 aa13.75□□□□□ -0.21
SREBF1-202ENST00000355815 AARSD1Q9BTE6 412 aaKnown RBP13.75□□□□□ -0.21
SREBF1-202ENST00000355815 MRPL9Q9BYD2 267 aaKnown RBP13.75□□□□□ -0.21
SREBF1-202ENST00000355815 ZNF696Q9H7X3 374 aa13.75□□□□□ -0.21
SREBF1-202ENST00000355815 CLCA2Q9UQC9 943 aa13.75□□□□□ -0.21
SREBF1-202ENST00000355815 PHIPQ8WWQ0 1821 aa13.74□□□□□ -0.21
SREBF1-202ENST00000355815 AQP12BA6NM10 295 aa13.74□□□□□ -0.21
SREBF1-202ENST00000355815 CLTBP09497 229 aa13.74□□□□□ -0.21
SREBF1-202ENST00000355815 RGRP47804 291 aa13.74□□□□□ -0.21
SREBF1-202ENST00000355815 FBXW4P57775 412 aa13.74□□□□□ -0.21
SREBF1-202ENST00000355815 NCS1P62166 190 aa13.74□□□□□ -0.21
SREBF1-202ENST00000355815 BNC1Q01954 994 aa13.74□□□□□ -0.21
SREBF1-202ENST00000355815 KCNAB2Q13303 367 aa13.74□□□□□ -0.21
SREBF1-202ENST00000355815 MORN1Q5T089 497 aa13.74□□□□□ -0.21
SREBF1-202ENST00000355815 DCDC5Q6ZRR9 648 aa13.74□□□□□ -0.21
SREBF1-202ENST00000355815 DNAJB7Q7Z6W7 309 aaPredicted RBP13.74□□□□□ -0.21
SREBF1-202ENST00000355815 KBTBD6Q86V97 674 aa13.74□□□□□ -0.21
SREBF1-202ENST00000355815 AQP12AQ8IXF9 295 aa13.74□□□□□ -0.21
SREBF1-202ENST00000355815 TRPV1Q8NER1 839 aa13.74□□□□□ -0.21
SREBF1-202ENST00000355815 MTERF1Q99551 399 aaKnown RBP13.74□□□□□ -0.21
SREBF1-202ENST00000355815 COL11A2P13942 1736 aaPredicted RBP13.74□□□□□ -0.21
SREBF1-202ENST00000355815 ISPDA4D126 451 aa13.74□□□□□ -0.21
SREBF1-202ENST00000355815 CXCR6O00574 342 aa13.74□□□□□ -0.21
SREBF1-202ENST00000355815 TPST2O60704 377 aa13.74□□□□□ -0.21
SREBF1-202ENST00000355815 YES1P07947 543 aa13.74□□□□□ -0.21
SREBF1-202ENST00000355815 ACRP10323 421 aa13.74□□□□□ -0.21
SREBF1-202ENST00000355815 RPIAP49247 311 aa13.74□□□□□ -0.21
SREBF1-202ENST00000355815 STC1P52823 247 aa13.74□□□□□ -0.21
SREBF1-202ENST00000355815 CDH4P55283 916 aa13.74□□□□□ -0.21
SREBF1-202ENST00000355815 GNG2P59768 71 aa13.74□□□□□ -0.21
SREBF1-202ENST00000355815 PTGR1Q14914 329 aa13.74□□□□□ -0.21
SREBF1-202ENST00000355815 FOXB2Q5VYV0 432 aa13.74□□□□□ -0.21
SREBF1-202ENST00000355815 ZNF773Q6PK81 442 aa13.74□□□□□ -0.21
SREBF1-202ENST00000355815 ADGRG6Q86SQ4 1221 aa13.74□□□□□ -0.21
SREBF1-202ENST00000355815 SLC15A3Q8IY34 581 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms