RNA–Protein interactions for RNA: ENST00000353047.10

CTSB-202, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 3,875 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-202ENST00000353047 OR2T29Q8NH02 315 aa17.62■□□□□ 0.41
CTSB-202ENST00000353047 DNMT3LQ9UJW3 386 aa17.62■□□□□ 0.41
CTSB-202ENST00000353047 LTBP3Q9NS15 1303 aa17.61■□□□□ 0.41
CTSB-202ENST00000353047 PRAMEF11O60813 436 aa17.61■□□□□ 0.41
CTSB-202ENST00000353047 MATN4O95460 622 aa17.61■□□□□ 0.41
CTSB-202ENST00000353047 GSTM1P09488 218 aa17.61■□□□□ 0.41
CTSB-202ENST00000353047 HOXB8P17481 243 aaPredicted RBP17.61■□□□□ 0.41
CTSB-202ENST00000353047 TAF1AQ15573 450 aaPredicted RBP17.61■□□□□ 0.41
CTSB-202ENST00000353047 HKDC1Q2TB90 917 aa17.61■□□□□ 0.41
CTSB-202ENST00000353047 SPDYE7PQ495Y7 208 aa17.61■□□□□ 0.41
CTSB-202ENST00000353047 NLGN4XQ8N0W4 816 aa17.61■□□□□ 0.41
CTSB-202ENST00000353047 HDAC2Q92769 488 aaKnown RBP17.61■□□□□ 0.41
CTSB-202ENST00000353047 HSH2DQ96JZ2 352 aa17.61■□□□□ 0.41
CTSB-202ENST00000353047 NEURL2Q9BR09 285 aa17.61■□□□□ 0.41
CTSB-202ENST00000353047 GPR62Q9BZJ7 368 aa17.61■□□□□ 0.41
CTSB-202ENST00000353047 TMEM248Q9NWD8 314 aa17.61■□□□□ 0.41
CTSB-202ENST00000353047 COL11A1P12107 1806 aaPredicted RBP17.61■□□□□ 0.41
CTSB-202ENST00000353047 SNX4O95219 450 aa17.61■□□□□ 0.41
CTSB-202ENST00000353047 RRM2P31350 389 aa17.61■□□□□ 0.41
CTSB-202ENST00000353047 ILF2Q12905 390 aaKnown RBP17.61■□□□□ 0.41
CTSB-202ENST00000353047 KCNJ8Q15842 424 aa17.61■□□□□ 0.41
CTSB-202ENST00000353047 RFX4Q33E94 735 aa17.61■□□□□ 0.41
CTSB-202ENST00000353047 DGKKQ5KSL6 1271 aa17.61■□□□□ 0.41
CTSB-202ENST00000353047 TRIM48Q8IWZ4 208 aa17.61■□□□□ 0.41
CTSB-202ENST00000353047 SLC34A3Q8N130 599 aa17.61■□□□□ 0.41
CTSB-202ENST00000353047 DTX3Q8N9I9 347 aa17.61■□□□□ 0.41
CTSB-202ENST00000353047 NTN4Q9HB63 628 aa17.61■□□□□ 0.41
CTSB-202ENST00000353047 SLC6A13Q9NSD5 602 aa17.61■□□□□ 0.41
CTSB-202ENST00000353047 FER1L6Q2WGJ9 1857 aa17.61■□□□□ 0.41
CTSB-202ENST00000353047 CLDN9O95484 217 aa17.61■□□□□ 0.41
CTSB-202ENST00000353047 STSP08842 583 aa17.61■□□□□ 0.41
CTSB-202ENST00000353047 MFSD14CQ5VZR4 134 aa17.61■□□□□ 0.41
CTSB-202ENST00000353047 STK40Q8N2I9 435 aa17.61■□□□□ 0.41
CTSB-202ENST00000353047 WDR36Q8NI36 951 aaKnown RBP17.61■□□□□ 0.41
CTSB-202ENST00000353047 S100ZQ8WXG8 99 aa17.61■□□□□ 0.41
CTSB-202ENST00000353047 TANKQ92844 425 aa17.61■□□□□ 0.41
CTSB-202ENST00000353047 PYURFQ96I23 114 aa17.61■□□□□ 0.41
CTSB-202ENST00000353047 NUSAP1Q9BXS6 441 aaKnown RBP17.61■□□□□ 0.41
CTSB-202ENST00000353047 ATP13A3Q9H7F0 1226 aa17.61■□□□□ 0.41
CTSB-202ENST00000353047 MRM3Q9HC36 420 aaKnown RBP17.61■□□□□ 0.41
CTSB-202ENST00000353047 THUMPD1Q9NXG2 353 aaKnown RBP17.61■□□□□ 0.41
CTSB-202ENST00000353047 TMEM9Q9P0T7 183 aa17.61■□□□□ 0.41
CTSB-202ENST00000353047 TRBC1P01850 177 aa17.6■□□□□ 0.41
CTSB-202ENST00000353047 C1QCP02747 245 aa17.6■□□□□ 0.41
CTSB-202ENST00000353047 CKMT1AP12532 417 aa17.6■□□□□ 0.41
CTSB-202ENST00000353047 CDKN2CP42773 168 aa17.6■□□□□ 0.41
CTSB-202ENST00000353047 MAD2L1Q13257 205 aaPredicted RBP17.6■□□□□ 0.41
CTSB-202ENST00000353047 VPS37AQ8NEZ2 397 aa17.6■□□□□ 0.41
CTSB-202ENST00000353047 RHEBL1Q8TAI7 183 aa17.6■□□□□ 0.41
CTSB-202ENST00000353047 MTERF3Q96E29 417 aa17.6■□□□□ 0.41
CTSB-202ENST00000353047 ALPK1Q96QP1 1244 aa17.6■□□□□ 0.41
CTSB-202ENST00000353047 SNTG1Q9NSN8 517 aa17.6■□□□□ 0.41
CTSB-202ENST00000353047 GPR83Q9NYM4 423 aa17.6■□□□□ 0.41
CTSB-202ENST00000353047 ABCD2Q9UBJ2 740 aa17.6■□□□□ 0.41
CTSB-202ENST00000353047 C5orf58C9J3I9 102 aa17.6■□□□□ 0.41
CTSB-202ENST00000353047 SUV39H1O43463 412 aa17.6■□□□□ 0.41
CTSB-202ENST00000353047 PAPSS2O95340 614 aaPredicted RBP17.6■□□□□ 0.41
CTSB-202ENST00000353047 NUDT7P0C024 238 aa17.6■□□□□ 0.41
CTSB-202ENST00000353047 CCDC159P0C7I6 412 aa17.6■□□□□ 0.41
CTSB-202ENST00000353047 EPORP19235 508 aa17.6■□□□□ 0.41
CTSB-202ENST00000353047 GSTM2P28161 218 aa17.6■□□□□ 0.41
CTSB-202ENST00000353047 RPP38P78345 283 aaKnown RBP17.6■□□□□ 0.41
CTSB-202ENST00000353047 TOP3AQ13472 1001 aaPredicted RBP17.6■□□□□ 0.41
CTSB-202ENST00000353047 NAE1Q13564 534 aa17.6■□□□□ 0.41
CTSB-202ENST00000353047 OTUB1Q96FW1 271 aaPredicted RBP17.6■□□□□ 0.41
CTSB-202ENST00000353047 TIGARQ9NQ88 270 aa17.6■□□□□ 0.41
CTSB-202ENST00000353047 TRIP12Q14669 1992 aaPredicted RBP17.6■□□□□ 0.41
CTSB-202ENST00000353047 H0YAE9 185 aa17.6■□□□□ 0.41
CTSB-202ENST00000353047 E2F3O00716 465 aa17.6■□□□□ 0.41
CTSB-202ENST00000353047 SCELO95171 688 aa17.6■□□□□ 0.41
CTSB-202ENST00000353047 GADD45AP24522 165 aa17.6■□□□□ 0.41
CTSB-202ENST00000353047 RECQLP46063 649 aaPredicted RBP17.6■□□□□ 0.41
CTSB-202ENST00000353047 YBEYP58557 167 aaPredicted RBP17.6■□□□□ 0.41
CTSB-202ENST00000353047 SF3B4Q15427 424 aaKnown RBP eCLIP17.6■□□□□ 0.411e-7■■■□□ 16.5
CTSB-202ENST00000353047 BHLHA9Q7RTU4 235 aa17.6■□□□□ 0.41
CTSB-202ENST00000353047 ZBTB2Q8N680 514 aa17.6■□□□□ 0.41
CTSB-202ENST00000353047 ZNF366Q8N895 744 aa17.6■□□□□ 0.41
CTSB-202ENST00000353047 FAM83FQ8NEG4 500 aaPredicted RBP17.6■□□□□ 0.41
CTSB-202ENST00000353047 LKAAEAR1Q8TD35 194 aa17.6■□□□□ 0.41
CTSB-202ENST00000353047 AUTS2Q8WXX7 1259 aa17.6■□□□□ 0.41
CTSB-202ENST00000353047 FOXJ1Q92949 421 aa17.6■□□□□ 0.41
CTSB-202ENST00000353047 ZNF641Q96N77 438 aaPredicted RBP17.6■□□□□ 0.41
CTSB-202ENST00000353047 PCDHB7Q9Y5E2 793 aa17.6■□□□□ 0.41
CTSB-202ENST00000353047 TNFRSF11BO00300 401 aa17.59■□□□□ 0.41
CTSB-202ENST00000353047 PDYNP01213 254 aa17.59■□□□□ 0.41
CTSB-202ENST00000353047 RPS17P08708 135 aaKnown RBP17.59■□□□□ 0.41
CTSB-202ENST00000353047 PRKAG1P54619 331 aa17.59■□□□□ 0.41
CTSB-202ENST00000353047 ADARB1P78563 741 aaKnown RBP17.59■□□□□ 0.41
CTSB-202ENST00000353047 KCNA10Q16322 511 aa17.59■□□□□ 0.41
CTSB-202ENST00000353047 PTCHD3Q3KNS1 767 aa17.59■□□□□ 0.41
CTSB-202ENST00000353047 CATSPEREQ5SY80 951 aa17.59■□□□□ 0.41
CTSB-202ENST00000353047 TPRG1LQ5T0D9 272 aa17.59■□□□□ 0.41
CTSB-202ENST00000353047 HECTD3Q5T447 861 aa17.59■□□□□ 0.41
CTSB-202ENST00000353047 SUSD1Q6UWL2 747 aa17.59■□□□□ 0.41
CTSB-202ENST00000353047 NELL1Q92832 810 aa17.59■□□□□ 0.41
CTSB-202ENST00000353047 TTPALQ9BTX7 342 aa17.59■□□□□ 0.41
CTSB-202ENST00000353047 MOSPD1Q9UJG1 213 aa17.59■□□□□ 0.41
CTSB-202ENST00000353047 ACSL6Q9UKU0 697 aa17.59■□□□□ 0.41
CTSB-202ENST00000353047 GLYATL1P3A0A0U1RQE8 302 aa17.59■□□□□ 0.41
CTSB-202ENST00000353047 SLC6A4P31645 630 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms