RNA–Protein interactions for RNA: ENST00000349780.8

CDK5RAP2-201, Transcript of CDK5 regulatory subunit associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDK5RAP2, Length 6,228 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2-201ENST00000349780 PNPLA4P41247 253 aa11.54□□□□□ -0.56
CDK5RAP2-201ENST00000349780 MTAPQ13126 283 aa11.54□□□□□ -0.56
CDK5RAP2-201ENST00000349780 CELF3Q5SZQ8 465 aaKnown RBP11.54□□□□□ -0.56
CDK5RAP2-201ENST00000349780 NRARPQ7Z6K4 114 aa11.54□□□□□ -0.56
CDK5RAP2-201ENST00000349780 RHBDF1Q96CC6 855 aa11.54□□□□□ -0.56
CDK5RAP2-201ENST00000349780 RGCCQ9H4X1 137 aa11.54□□□□□ -0.56
CDK5RAP2-201ENST00000349780 IFNW1P05000 195 aa11.54□□□□□ -0.56
CDK5RAP2-201ENST00000349780 AGXTP21549 392 aa11.54□□□□□ -0.56
CDK5RAP2-201ENST00000349780 ATP4BP51164 291 aa11.54□□□□□ -0.56
CDK5RAP2-201ENST00000349780 FLI1Q01543 452 aaPredicted RBP11.54□□□□□ -0.56
CDK5RAP2-201ENST00000349780 TAF13Q15543 124 aa11.54□□□□□ -0.56
CDK5RAP2-201ENST00000349780 NTRK2Q16620 822 aa11.54□□□□□ -0.56
CDK5RAP2-201ENST00000349780 IFI44LQ53G44 452 aa11.54□□□□□ -0.56
CDK5RAP2-201ENST00000349780 LYSMD2Q8IV50 215 aa11.54□□□□□ -0.56
CDK5RAP2-201ENST00000349780 HDDC3Q8N4P3 179 aa11.54□□□□□ -0.56
CDK5RAP2-201ENST00000349780 RFKQ969G6 155 aa11.54□□□□□ -0.56
CDK5RAP2-201ENST00000349780 NUSAP1Q9BXS6 441 aaKnown RBP11.54□□□□□ -0.56
CDK5RAP2-201ENST00000349780 TM9SF3Q9HD45 589 aa11.54□□□□□ -0.56
CDK5RAP2-201ENST00000349780 HRH3Q9Y5N1 445 aa11.54□□□□□ -0.56
CDK5RAP2-201ENST00000349780 NID2Q14112 1375 aa11.54□□□□□ -0.56
CDK5RAP2-201ENST00000349780 MOXD2PA6NHM9 499 aa11.54□□□□□ -0.56
CDK5RAP2-201ENST00000349780 NKRFO15226 690 aaKnown RBP eCLIP11.54□□□□□ -0.56
CDK5RAP2-201ENST00000349780 CHP2O43745 196 aa11.54□□□□□ -0.56
CDK5RAP2-201ENST00000349780 LCMT2O60294 686 aaKnown RBP11.54□□□□□ -0.56
CDK5RAP2-201ENST00000349780 NPM3O75607 178 aaKnown RBP11.54□□□□□ -0.56
CDK5RAP2-201ENST00000349780 OR4F21O95013 312 aa11.54□□□□□ -0.56
CDK5RAP2-201ENST00000349780 IFNA6P05013 189 aa11.54□□□□□ -0.56
CDK5RAP2-201ENST00000349780 RB1P06400 928 aa11.54□□□□□ -0.56
CDK5RAP2-201ENST00000349780 ANXA5P08758 320 aa11.54□□□□□ -0.56
CDK5RAP2-201ENST00000349780 ARF3P61204 181 aaPredicted RBP11.54□□□□□ -0.56
CDK5RAP2-201ENST00000349780 ARF1P84077 181 aaKnown RBP11.54□□□□□ -0.56
CDK5RAP2-201ENST00000349780 FAM209AQ5JX71 171 aa11.54□□□□□ -0.56
CDK5RAP2-201ENST00000349780 C3P1Q6ZMU1 363 aa11.54□□□□□ -0.56
CDK5RAP2-201ENST00000349780 PRSS48Q7RTY5 328 aa11.54□□□□□ -0.56
CDK5RAP2-201ENST00000349780 CEP97Q8IW35 865 aa11.54□□□□□ -0.56
CDK5RAP2-201ENST00000349780 ADGRF2Q8IZF7 708 aa11.54□□□□□ -0.56
CDK5RAP2-201ENST00000349780 LGI4Q8N135 537 aa11.54□□□□□ -0.56
CDK5RAP2-201ENST00000349780 SDR16C5Q8N3Y7 309 aa11.54□□□□□ -0.56
CDK5RAP2-201ENST00000349780 CSPG4P5Q96PW8 444 aa11.54□□□□□ -0.56
CDK5RAP2-201ENST00000349780 MCMBPQ9BTE3 642 aa11.54□□□□□ -0.56
CDK5RAP2-201ENST00000349780 HOXD1Q9GZZ0 328 aa11.54□□□□□ -0.56
CDK5RAP2-201ENST00000349780 SLC9A3R1O14745 358 aaPredicted RBP11.54□□□□□ -0.56
CDK5RAP2-201ENST00000349780 SMAD9O15198 467 aaKnown RBP11.54□□□□□ -0.56
CDK5RAP2-201ENST00000349780 DYNC1LI2O43237 492 aaPredicted RBP11.54□□□□□ -0.56
CDK5RAP2-201ENST00000349780 MFSD11O43934 449 aa11.54□□□□□ -0.56
CDK5RAP2-201ENST00000349780 FPGSQ05932 587 aa11.54□□□□□ -0.56
CDK5RAP2-201ENST00000349780 PTGR1Q14914 329 aa11.54□□□□□ -0.56
CDK5RAP2-201ENST00000349780 FAM182AQ5T1J6 154 aa11.54□□□□□ -0.56
CDK5RAP2-201ENST00000349780 GCNT6Q5T4J0 391 aa11.54□□□□□ -0.56
CDK5RAP2-201ENST00000349780 TFAP2DQ7Z6R9 452 aa11.54□□□□□ -0.56
CDK5RAP2-201ENST00000349780 ZBTB44Q8NCP5 570 aa11.54□□□□□ -0.56
CDK5RAP2-201ENST00000349780 SPPL2BQ8TCT7 592 aa11.54□□□□□ -0.56
CDK5RAP2-201ENST00000349780 HBEGFQ99075 208 aa11.54□□□□□ -0.56
CDK5RAP2-201ENST00000349780 TKTL2Q9H0I9 626 aa11.54□□□□□ -0.56
CDK5RAP2-201ENST00000349780 ABCG5Q9H222 651 aa11.54□□□□□ -0.56
CDK5RAP2-201ENST00000349780 UFSP2Q9NUQ7 469 aa11.54□□□□□ -0.56
CDK5RAP2-201ENST00000349780 WASHC1A8K0Z3 465 aa11.53□□□□□ -0.56
CDK5RAP2-201ENST00000349780 LCKP06239 509 aa11.53□□□□□ -0.56
CDK5RAP2-201ENST00000349780 BMP7P18075 431 aa11.53□□□□□ -0.56
CDK5RAP2-201ENST00000349780 UFM1P61960 85 aa11.53□□□□□ -0.56
CDK5RAP2-201ENST00000349780 HEPACAMQ14CZ8 416 aa11.53□□□□□ -0.56
CDK5RAP2-201ENST00000349780 DUSP6Q16828 381 aa11.53□□□□□ -0.56
CDK5RAP2-201ENST00000349780 PTPRNQ16849 979 aa11.53□□□□□ -0.56
CDK5RAP2-201ENST00000349780 ZNF598Q86UK7 904 aaKnown RBP11.53□□□□□ -0.56
CDK5RAP2-201ENST00000349780 KLHL36Q8N4N3 616 aa11.53□□□□□ -0.56
CDK5RAP2-201ENST00000349780 OR13F1Q8NGS4 319 aa11.53□□□□□ -0.56
CDK5RAP2-201ENST00000349780 NIT2Q9NQR4 276 aa11.53□□□□□ -0.56
CDK5RAP2-201ENST00000349780 THUMPD1Q9NXG2 353 aaKnown RBP11.53□□□□□ -0.56
CDK5RAP2-201ENST00000349780 DNMT3LQ9UJW3 386 aa11.53□□□□□ -0.56
CDK5RAP2-201ENST00000349780 CDH7Q9ULB5 785 aa11.53□□□□□ -0.56
CDK5RAP2-201ENST00000349780 OR6C74A6NCV1 312 aa11.53□□□□□ -0.56
CDK5RAP2-201ENST00000349780 PITPNM1O00562 1244 aa11.53□□□□□ -0.56
CDK5RAP2-201ENST00000349780 HCN1O60741 890 aa11.53□□□□□ -0.56
CDK5RAP2-201ENST00000349780 CREG1O75629 220 aa11.53□□□□□ -0.56
CDK5RAP2-201ENST00000349780 SRCP12931 536 aa11.53□□□□□ -0.56
CDK5RAP2-201ENST00000349780 BRCC3P46736 316 aa11.53□□□□□ -0.56
CDK5RAP2-201ENST00000349780 PRKCDQ05655 676 aa11.53□□□□□ -0.56
CDK5RAP2-201ENST00000349780 CAMK2GQ13555 558 aaPredicted RBP11.53□□□□□ -0.56
CDK5RAP2-201ENST00000349780 SLC51AQ86UW1 340 aa11.53□□□□□ -0.56
CDK5RAP2-201ENST00000349780 PGBD3Q8N328 593 aa11.53□□□□□ -0.56
CDK5RAP2-201ENST00000349780 OR2T35Q8NGX2 323 aa11.53□□□□□ -0.56
CDK5RAP2-201ENST00000349780 RSPH9Q9H1X1 276 aaPredicted RBP11.53□□□□□ -0.56
CDK5RAP2-201ENST00000349780 SCPEP1Q9HB40 452 aa11.53□□□□□ -0.56
CDK5RAP2-201ENST00000349780 ARHGAP23Q9P227 1491 aa11.53□□□□□ -0.56
CDK5RAP2-201ENST00000349780 DHRS4L1P0CG22 281 aa11.53□□□□□ -0.56
CDK5RAP2-201ENST00000349780 TYMPP19971 482 aa11.53□□□□□ -0.56
CDK5RAP2-201ENST00000349780 HTR1BP28222 390 aa11.53□□□□□ -0.56
CDK5RAP2-201ENST00000349780 WEE1P30291 646 aa11.53□□□□□ -0.56
CDK5RAP2-201ENST00000349780 RGS6P49758 472 aa11.53□□□□□ -0.56
CDK5RAP2-201ENST00000349780 NKX2-3Q8TAU0 364 aa11.53□□□□□ -0.56
CDK5RAP2-201ENST00000349780 FANK1Q8TC84 345 aa11.53□□□□□ -0.56
CDK5RAP2-201ENST00000349780 ST8SIA4Q92187 359 aa11.53□□□□□ -0.56
CDK5RAP2-201ENST00000349780 ELMOD3Q96FG2 381 aa11.53□□□□□ -0.56
CDK5RAP2-201ENST00000349780 AHSPQ9NZD4 102 aa11.53□□□□□ -0.56
CDK5RAP2-201ENST00000349780 ERVK-19Q9WJR5 959 aa11.53□□□□□ -0.56
CDK5RAP2-201ENST00000349780 TRAV20A0A0B4J274 112 aa11.53□□□□□ -0.56
CDK5RAP2-201ENST00000349780 VNN2O95498 520 aa11.53□□□□□ -0.56
CDK5RAP2-201ENST00000349780 IFNA17P01571 189 aa11.53□□□□□ -0.56
CDK5RAP2-201ENST00000349780 KLRK1P26718 216 aa11.53□□□□□ -0.56
CDK5RAP2-201ENST00000349780 CHRNA5P30532 468 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms