RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 PSMA3P25788 255 aa15□□□□□ -0.01
LINC01116-202ENST00000339037 PKLRP30613 574 aa15□□□□□ -0.01
LINC01116-202ENST00000339037 FOXN2P32314 431 aa15□□□□□ -0.01
LINC01116-202ENST00000339037 CSE1LP55060 971 aaKnown RBP15□□□□□ -0.01
LINC01116-202ENST00000339037 CCDC38Q502W7 563 aa15□□□□□ -0.01
LINC01116-202ENST00000339037 DNAJC21Q5F1R6 531 aaKnown RBP15□□□□□ -0.01
LINC01116-202ENST00000339037 OVCH1Q7RTY7 1134 aa15□□□□□ -0.01
LINC01116-202ENST00000339037 PEX26Q7Z412 305 aa15□□□□□ -0.01
LINC01116-202ENST00000339037 TICAM1Q8IUC6 712 aa15□□□□□ -0.01
LINC01116-202ENST00000339037 MCATQ8IVS2 390 aaKnown RBP15□□□□□ -0.01
LINC01116-202ENST00000339037 ANKK1Q8NFD2 765 aa15□□□□□ -0.01
LINC01116-202ENST00000339037 COG1Q8WTW3 980 aa15□□□□□ -0.01
LINC01116-202ENST00000339037 SLC22A18Q96BI1 424 aa15□□□□□ -0.01
LINC01116-202ENST00000339037 TTC1Q99614 292 aa15□□□□□ -0.01
LINC01116-202ENST00000339037 KRTAP3-3Q9BYR6 98 aa15□□□□□ -0.01
LINC01116-202ENST00000339037 KRTAP3-2Q9BYR7 98 aa15□□□□□ -0.01
LINC01116-202ENST00000339037 MRM3Q9HC36 420 aaKnown RBP15□□□□□ -0.01
LINC01116-202ENST00000339037 AMFRQ9UKV5 643 aa15□□□□□ -0.01
LINC01116-202ENST00000339037 MDC1Q14676 2089 aaKnown RBP15□□□□□ -0.01
LINC01116-202ENST00000339037 CELSR1Q9NYQ6 3014 aa14.99□□□□□ -0.01
LINC01116-202ENST00000339037 CCDC162PA2VCL2 907 aa14.99□□□□□ -0.01
LINC01116-202ENST00000339037 SOCS6O14544 535 aa14.99□□□□□ -0.01
LINC01116-202ENST00000339037 OR1I1O60431 355 aa14.99□□□□□ -0.01
LINC01116-202ENST00000339037 FTCDO95954 541 aa14.99□□□□□ -0.01
LINC01116-202ENST00000339037 RPN2P04844 631 aa14.99□□□□□ -0.01
LINC01116-202ENST00000339037 TSFMP43897 325 aaKnown RBP14.99□□□□□ -0.01
LINC01116-202ENST00000339037 PER3P56645 1201 aa14.99□□□□□ -0.01
LINC01116-202ENST00000339037 HSPA14Q0VDF9 509 aa14.99□□□□□ -0.01
LINC01116-202ENST00000339037 NKG7Q16617 165 aa14.99□□□□□ -0.01
LINC01116-202ENST00000339037 LINC00523Q86TU6 105 aa14.99□□□□□ -0.01
LINC01116-202ENST00000339037 KCNMB4Q86W47 210 aa14.99□□□□□ -0.01
LINC01116-202ENST00000339037 DCUN1D3Q8IWE4 304 aa14.99□□□□□ -0.01
LINC01116-202ENST00000339037 SLC22A15Q8IZD6 547 aa14.99□□□□□ -0.01
LINC01116-202ENST00000339037 TAB3Q8N5C8 712 aaPredicted RBP14.99□□□□□ -0.01
LINC01116-202ENST00000339037 LINC01555Q8NAE3 123 aa14.99□□□□□ -0.01
LINC01116-202ENST00000339037 DNAJB14Q8TBM8 379 aa14.99□□□□□ -0.01
LINC01116-202ENST00000339037 GRHL3Q8TE85 626 aa14.99□□□□□ -0.01
LINC01116-202ENST00000339037 CNDP1Q96KN2 507 aa14.99□□□□□ -0.01
LINC01116-202ENST00000339037 SPSB2Q99619 263 aa14.99□□□□□ -0.01
LINC01116-202ENST00000339037 SLC26A1Q9H2B4 701 aa14.99□□□□□ -0.01
LINC01116-202ENST00000339037 EPS8L2Q9H6S3 715 aa14.99□□□□□ -0.01
LINC01116-202ENST00000339037 CUTCQ9NTM9 273 aa14.99□□□□□ -0.01
LINC01116-202ENST00000339037 INTS7Q9NVH2 962 aaKnown RBP14.99□□□□□ -0.01
LINC01116-202ENST00000339037 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.99□□□□□ -0.01
LINC01116-202ENST00000339037 NXT1Q9UKK6 140 aaKnown RBP14.99□□□□□ -0.01
LINC01116-202ENST00000339037 R3HDM2Q9Y2K5 976 aaKnown RBP14.99□□□□□ -0.01
LINC01116-202ENST00000339037 HS3ST3B1Q9Y662 390 aa14.99□□□□□ -0.01
LINC01116-202ENST00000339037 ANKRD17O75179 2603 aaKnown RBP14.99□□□□□ -0.01
LINC01116-202ENST00000339037 DCHS2Q6V1P9 2916 aa14.99□□□□□ -0.01
LINC01116-202ENST00000339037 CSMD2Q7Z408 3487 aa14.98□□□□□ -0.01
LINC01116-202ENST00000339037 TCRBV7S2A1N4TA0A589 114 aa14.98□□□□□ -0.01
LINC01116-202ENST00000339037 DSCR3O14972 297 aa14.98□□□□□ -0.01
LINC01116-202ENST00000339037 PSMD3O43242 534 aa14.98□□□□□ -0.01
LINC01116-202ENST00000339037 LRRTM2O43300 516 aa14.98□□□□□ -0.01
LINC01116-202ENST00000339037 ONECUT2O95948 504 aa14.98□□□□□ -0.01
LINC01116-202ENST00000339037 S1PR4O95977 384 aa14.98□□□□□ -0.01
LINC01116-202ENST00000339037 CD9P21926 228 aa14.98□□□□□ -0.01
LINC01116-202ENST00000339037 GDF10P55107 478 aa14.98□□□□□ -0.01
LINC01116-202ENST00000339037 CDC16Q13042 620 aa14.98□□□□□ -0.01
LINC01116-202ENST00000339037 KLF1Q13351 362 aaPredicted RBP14.98□□□□□ -0.01
LINC01116-202ENST00000339037 GRM7Q14831 915 aa14.98□□□□□ -0.01
LINC01116-202ENST00000339037 ZNF169Q14929 603 aaPredicted RBP14.98□□□□□ -0.01
LINC01116-202ENST00000339037 ZC3H12BQ5HYM0 836 aaKnown RBP14.98□□□□□ -0.01
LINC01116-202ENST00000339037 TCTE1Q5JU00 501 aa14.98□□□□□ -0.01
LINC01116-202ENST00000339037 YOD1Q5VVQ6 348 aaPredicted RBP14.98□□□□□ -0.01
LINC01116-202ENST00000339037 B3GNTL1Q67FW5 361 aaPredicted RBP14.98□□□□□ -0.01
LINC01116-202ENST00000339037 AFTPHQ6ULP2 937 aa14.98□□□□□ -0.01
LINC01116-202ENST00000339037 KIRREL2Q6UWL6 708 aa14.98□□□□□ -0.01
LINC01116-202ENST00000339037 IGFL2Q6UWQ7 119 aa14.98□□□□□ -0.01
LINC01116-202ENST00000339037 SHISA6Q6ZSJ9 500 aa14.98□□□□□ -0.01
LINC01116-202ENST00000339037 TAX1BP1Q86VP1 789 aa14.98□□□□□ -0.01
LINC01116-202ENST00000339037 C2orf73Q8N5S3 287 aaPredicted RBP14.98□□□□□ -0.01
LINC01116-202ENST00000339037 DNAAF3Q8N9W5 541 aa14.98□□□□□ -0.01
LINC01116-202ENST00000339037 OR13J1Q8NGT2 312 aa14.98□□□□□ -0.01
LINC01116-202ENST00000339037 ASZ1Q8WWH4 475 aa14.98□□□□□ -0.01
LINC01116-202ENST00000339037 POM121Q96HA1 1249 aa14.98□□□□□ -0.01
LINC01116-202ENST00000339037 VPS50Q96JG6 964 aa14.98□□□□□ -0.01
LINC01116-202ENST00000339037 MENTQ9BUN1 341 aa14.98□□□□□ -0.01
LINC01116-202ENST00000339037 TSSK1BQ9BXA7 367 aa14.98□□□□□ -0.01
LINC01116-202ENST00000339037 LHPPQ9H008 270 aa14.98□□□□□ -0.01
LINC01116-202ENST00000339037 SOX17Q9H6I2 414 aaPredicted RBP14.98□□□□□ -0.01
LINC01116-202ENST00000339037 CTSFQ9UBX1 484 aa14.98□□□□□ -0.01
LINC01116-202ENST00000339037 CIDEBQ9UHD4 219 aa14.98□□□□□ -0.01
LINC01116-202ENST00000339037 OSGIN2Q9Y236 505 aa14.98□□□□□ -0.01
LINC01116-202ENST00000339037 CAPN6Q9Y6Q1 641 aa14.98□□□□□ -0.01
LINC01116-202ENST00000339037 ADGRG4Q8IZF6 3080 aa14.98□□□□□ -0.01
LINC01116-202ENST00000339037 FBN2P35556 2912 aa14.97□□□□□ -0.01
LINC01116-202ENST00000339037 MIF4GDA9UHW6 222 aaKnown RBP14.97□□□□□ -0.01
LINC01116-202ENST00000339037 E2F3O00716 465 aa14.97□□□□□ -0.01
LINC01116-202ENST00000339037 GAS8O95995 478 aa14.97□□□□□ -0.01
LINC01116-202ENST00000339037 EDN3P14138 238 aa14.97□□□□□ -0.01
LINC01116-202ENST00000339037 MCM3P25205 808 aa14.97□□□□□ -0.01
LINC01116-202ENST00000339037 TNFRSF8P28908 595 aa14.97□□□□□ -0.01
LINC01116-202ENST00000339037 CCR7P32248 378 aa14.97□□□□□ -0.01
LINC01116-202ENST00000339037 GRIA3P42263 894 aa14.97□□□□□ -0.01
LINC01116-202ENST00000339037 KIF5AQ12840 1032 aa14.97□□□□□ -0.01
LINC01116-202ENST00000339037 CDH17Q12864 832 aa14.97□□□□□ -0.01
LINC01116-202ENST00000339037 TLR1Q15399 786 aa14.97□□□□□ -0.01
LINC01116-202ENST00000339037 SF1Q15637 639 aaKnown RBP14.97□□□□□ -0.01
LINC01116-202ENST00000339037 RBBP7Q16576 425 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms