RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 MRGPREQ86SM8 312 aa10.25□□□□□ -0.77
CAPN3-202ENST00000337571 LDB1Q86U70 411 aaPredicted RBP10.25□□□□□ -0.77
CAPN3-202ENST00000337571 LRRC6Q86X45 466 aa10.25□□□□□ -0.77
CAPN3-202ENST00000337571 GALNT16Q8N428 558 aa10.25□□□□□ -0.77
CAPN3-202ENST00000337571 OR2L8Q8NGY9 312 aa10.25□□□□□ -0.77
CAPN3-202ENST00000337571 FLVCR1-AS1Q8TAF5 88 aa10.25□□□□□ -0.77
CAPN3-202ENST00000337571 MAIP1Q8WWC4 291 aa10.25□□□□□ -0.77
CAPN3-202ENST00000337571 ZUFSPQ96AP4 578 aa10.25□□□□□ -0.77
CAPN3-202ENST00000337571 RAD51AP1Q96B01 352 aa10.25□□□□□ -0.77
CAPN3-202ENST00000337571 NACC2Q96BF6 587 aa10.25□□□□□ -0.77
CAPN3-202ENST00000337571 VPS50Q96JG6 964 aa10.25□□□□□ -0.77
CAPN3-202ENST00000337571 ZNF778Q96MU6 729 aa10.25□□□□□ -0.77
CAPN3-202ENST00000337571 PSMG3-AS1Q96PY0 264 aa10.25□□□□□ -0.77
CAPN3-202ENST00000337571 IL22Q9GZX6 179 aa10.25□□□□□ -0.77
CAPN3-202ENST00000337571 ILKAPQ9H0C8 392 aaPredicted RBP10.25□□□□□ -0.77
CAPN3-202ENST00000337571 P4HTMQ9NXG6 502 aa10.25□□□□□ -0.77
CAPN3-202ENST00000337571 BFARQ9NZS9 450 aa10.25□□□□□ -0.77
CAPN3-202ENST00000337571 LUZP4Q9P127 313 aa10.25□□□□□ -0.77
CAPN3-202ENST00000337571 GNPTGQ9UJJ9 305 aa10.25□□□□□ -0.77
CAPN3-202ENST00000337571 TTC7AQ9ULT0 858 aaPredicted RBP10.25□□□□□ -0.77
CAPN3-202ENST00000337571 DRG1Q9Y295 367 aaKnown RBP10.25□□□□□ -0.77
CAPN3-202ENST00000337571 KLHL20Q9Y2M5 609 aa10.25□□□□□ -0.77
CAPN3-202ENST00000337571 MED13Q9UHV7 2174 aa10.25□□□□□ -0.77
CAPN3-202ENST00000337571 H3BMH7 237 aa10.24□□□□□ -0.77
CAPN3-202ENST00000337571 RASGRF2O14827 1237 aa10.24□□□□□ -0.77
CAPN3-202ENST00000337571 HCRTR1O43613 425 aa10.24□□□□□ -0.77
CAPN3-202ENST00000337571 FKBP9O95302 570 aa10.24□□□□□ -0.77
CAPN3-202ENST00000337571 ALBP02768 609 aa10.24□□□□□ -0.77
CAPN3-202ENST00000337571 ZSCAN5DPP0CG00 497 aa10.24□□□□□ -0.77
CAPN3-202ENST00000337571 ITGAXP20702 1163 aa10.24□□□□□ -0.77
CAPN3-202ENST00000337571 RPL22P35268 128 aaKnown RBP10.24□□□□□ -0.77
CAPN3-202ENST00000337571 GRIA3P42263 894 aa10.24□□□□□ -0.77
CAPN3-202ENST00000337571 BASP1P80723 227 aaKnown RBP10.24□□□□□ -0.77
CAPN3-202ENST00000337571 SARNPP82979 210 aaKnown RBP10.24□□□□□ -0.77
CAPN3-202ENST00000337571 SEMA3AQ14563 771 aa10.24□□□□□ -0.77
CAPN3-202ENST00000337571 PLEKHN1Q494U1 663 aaPredicted RBP10.24□□□□□ -0.77
CAPN3-202ENST00000337571 MEI1Q5TIA1 1274 aa10.24□□□□□ -0.77
CAPN3-202ENST00000337571 YOD1Q5VVQ6 348 aaPredicted RBP10.24□□□□□ -0.77
CAPN3-202ENST00000337571 SLC6A19Q695T7 634 aa10.24□□□□□ -0.77
CAPN3-202ENST00000337571 MRNIPQ6NTE8 343 aa10.24□□□□□ -0.77
CAPN3-202ENST00000337571 MRPL14Q6P1L8 145 aaKnown RBP10.24□□□□□ -0.77
CAPN3-202ENST00000337571 FIGLAQ6QHK4 219 aa10.24□□□□□ -0.77
CAPN3-202ENST00000337571 ZNF534Q76KX8 674 aa10.24□□□□□ -0.77
CAPN3-202ENST00000337571 OVCH1Q7RTY7 1134 aa10.24□□□□□ -0.77
CAPN3-202ENST00000337571 PRUNE1Q86TP1 453 aa10.24□□□□□ -0.77
CAPN3-202ENST00000337571 TAX1BP1Q86VP1 789 aa10.24□□□□□ -0.77
CAPN3-202ENST00000337571 VRK3Q8IV63 474 aa10.24□□□□□ -0.77
CAPN3-202ENST00000337571 FAM20CQ8IXL6 584 aa10.24□□□□□ -0.77
CAPN3-202ENST00000337571 IQCKQ8N0W5 287 aa10.24□□□□□ -0.77
CAPN3-202ENST00000337571 KRT222Q8N1A0 295 aa10.24□□□□□ -0.77
CAPN3-202ENST00000337571 MPP5Q8N3R9 675 aa10.24□□□□□ -0.77
CAPN3-202ENST00000337571 ZADH2Q8N4Q0 377 aa10.24□□□□□ -0.77
CAPN3-202ENST00000337571 RBMXL3Q8N7X1 1067 aaKnown RBP10.24□□□□□ -0.77
CAPN3-202ENST00000337571 TTC29Q8NA56 475 aaPredicted RBP10.24□□□□□ -0.77
CAPN3-202ENST00000337571 PRR7Q8TB68 274 aa10.24□□□□□ -0.77
CAPN3-202ENST00000337571 SELENOSQ9BQE4 189 aa10.24□□□□□ -0.77
CAPN3-202ENST00000337571 IL1RAPL1Q9NZN1 696 aa10.24□□□□□ -0.77
CAPN3-202ENST00000337571 CIDEBQ9UHD4 219 aa10.24□□□□□ -0.77
CAPN3-202ENST00000337571 CDC23Q9UJX2 597 aa10.24□□□□□ -0.77
CAPN3-202ENST00000337571 B3GNT3Q9Y2A9 372 aa10.24□□□□□ -0.77
CAPN3-202ENST00000337571 ZKSCAN5Q9Y2L8 839 aa10.24□□□□□ -0.77
CAPN3-202ENST00000337571 DOPEY2Q9Y3R5 2298 aa10.23□□□□□ -0.77
CAPN3-202ENST00000337571 A0A1B0GX78 115 aa10.23□□□□□ -0.77
CAPN3-202ENST00000337571 TCP11X1B4DZS4 312 aa10.23□□□□□ -0.77
CAPN3-202ENST00000337571 TARM1B6A8C7 271 aa10.23□□□□□ -0.77
CAPN3-202ENST00000337571 AGPSO00116 658 aa10.23□□□□□ -0.77
CAPN3-202ENST00000337571 DSCR3O14972 297 aa10.23□□□□□ -0.77
CAPN3-202ENST00000337571 SRPX2O60687 465 aaPredicted RBP10.23□□□□□ -0.77
CAPN3-202ENST00000337571 CTSBP07858 339 aa10.23□□□□□ -0.77
CAPN3-202ENST00000337571 PEBP1P30086 187 aaKnown RBP10.23□□□□□ -0.77
CAPN3-202ENST00000337571 CCNFP41002 786 aa10.23□□□□□ -0.77
CAPN3-202ENST00000337571 EIF3BP55884 814 aaKnown RBP10.23□□□□□ -0.77
CAPN3-202ENST00000337571 AIMP2Q13155 320 aaKnown RBP10.23□□□□□ -0.77
CAPN3-202ENST00000337571 ELOAQ14241 798 aaKnown RBP10.23□□□□□ -0.77
CAPN3-202ENST00000337571 EIF2S3LQ2VIR3 472 aaKnown RBP10.23□□□□□ -0.77
CAPN3-202ENST00000337571 LINC01555Q8NAE3 123 aa10.23□□□□□ -0.77
CAPN3-202ENST00000337571 SSC4DQ8WTU2 575 aa10.23□□□□□ -0.77
CAPN3-202ENST00000337571 FKBP10Q96AY3 582 aa10.23□□□□□ -0.77
CAPN3-202ENST00000337571 IL17FQ96PD4 163 aa10.23□□□□□ -0.77
CAPN3-202ENST00000337571 WDR54Q9H977 334 aa10.23□□□□□ -0.77
CAPN3-202ENST00000337571 EIF2B3Q9NR50 452 aaKnown RBP10.23□□□□□ -0.77
CAPN3-202ENST00000337571 HOMER3Q9NSC5 361 aa10.23□□□□□ -0.77
CAPN3-202ENST00000337571 CUTCQ9NTM9 273 aa10.23□□□□□ -0.77
CAPN3-202ENST00000337571 CUEDC1Q9NWM3 386 aaPredicted RBP10.23□□□□□ -0.77
CAPN3-202ENST00000337571 HYKKA2RU49 373 aa10.22□□□□□ -0.77
CAPN3-202ENST00000337571 H3BMM5 538 aa10.22□□□□□ -0.77
CAPN3-202ENST00000337571 VAPBO95292 243 aa10.22□□□□□ -0.77
CAPN3-202ENST00000337571 DDAH2O95865 285 aa10.22□□□□□ -0.77
CAPN3-202ENST00000337571 EIF2S1P05198 315 aaKnown RBP10.22□□□□□ -0.77
CAPN3-202ENST00000337571 CHRM3P20309 590 aa10.22□□□□□ -0.77
CAPN3-202ENST00000337571 MMP11P24347 488 aa10.22□□□□□ -0.77
CAPN3-202ENST00000337571 ITGA3P26006 1051 aa10.22□□□□□ -0.77
CAPN3-202ENST00000337571 NMBRP28336 390 aa10.22□□□□□ -0.77
CAPN3-202ENST00000337571 FMO4P31512 558 aa10.22□□□□□ -0.77
CAPN3-202ENST00000337571 GLRBP48167 497 aa10.22□□□□□ -0.77
CAPN3-202ENST00000337571 SOX8P57073 446 aa10.22□□□□□ -0.77
CAPN3-202ENST00000337571 VSX2P58304 361 aaPredicted RBP10.22□□□□□ -0.77
CAPN3-202ENST00000337571 CRADDP78560 199 aa10.22□□□□□ -0.77
CAPN3-202ENST00000337571 CDK16Q00536 496 aa10.22□□□□□ -0.77
CAPN3-202ENST00000337571 OCA2Q04671 838 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms