RNA–Protein interactions for RNA: ENST00000334414.10

PTPRB-202, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRB, Length 12,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-202ENST00000334414 CNTN5O94779 1100 aa5.41□□□□□ -1.54
PTPRB-202ENST00000334414 RCBTB2O95199 551 aa5.41□□□□□ -1.54
PTPRB-202ENST00000334414 HTR1BP28222 390 aa5.41□□□□□ -1.54
PTPRB-202ENST00000334414 RFX5P48382 616 aaPredicted RBP5.41□□□□□ -1.54
PTPRB-202ENST00000334414 MRPS5P82675 430 aaKnown RBP5.41□□□□□ -1.54
PTPRB-202ENST00000334414 BCL2A1Q16548 175 aa5.41□□□□□ -1.54
PTPRB-202ENST00000334414 ANKDD1AQ495B1 522 aa5.41□□□□□ -1.54
PTPRB-202ENST00000334414 FAM122CQ6P4D5 195 aa5.41□□□□□ -1.54
PTPRB-202ENST00000334414 EPGNQ6UW88 154 aa5.41□□□□□ -1.54
PTPRB-202ENST00000334414 DEFB106AQ8N104 65 aa5.41□□□□□ -1.54
PTPRB-202ENST00000334414 LNX1Q8TBB1 728 aaPredicted RBP5.41□□□□□ -1.54
PTPRB-202ENST00000334414 SLC22A17Q8WUG5 538 aa5.41□□□□□ -1.54
PTPRB-202ENST00000334414 ZNF416Q9BWM5 594 aa5.41□□□□□ -1.54
PTPRB-202ENST00000334414 B3GAT2Q9NPZ5 323 aa5.41□□□□□ -1.54
PTPRB-202ENST00000334414 FAM120CQ9NX05 1096 aaKnown RBP5.41□□□□□ -1.54
PTPRB-202ENST00000334414 NLGN3Q9NZ94 848 aa5.41□□□□□ -1.54
PTPRB-202ENST00000334414 TCAF1Q9Y4C2 921 aa5.41□□□□□ -1.54
PTPRB-202ENST00000334414 RHPN2P1A8MT19 583 aa5.41□□□□□ -1.54
PTPRB-202ENST00000334414 OIP5O43482 229 aa5.41□□□□□ -1.54
PTPRB-202ENST00000334414 PGLSO95336 258 aa5.41□□□□□ -1.54
PTPRB-202ENST00000334414 CAPN3P20807 821 aa5.41□□□□□ -1.54
PTPRB-202ENST00000334414 EN1Q05925 392 aaPredicted RBP5.41□□□□□ -1.54
PTPRB-202ENST00000334414 ZNF33AQ06730 810 aa5.41□□□□□ -1.54
PTPRB-202ENST00000334414 SNTA1Q13424 505 aa5.41□□□□□ -1.54
PTPRB-202ENST00000334414 SCARB2Q14108 478 aa5.41□□□□□ -1.54
PTPRB-202ENST00000334414 HECTD2Q5U5R9 776 aa5.41□□□□□ -1.54
PTPRB-202ENST00000334414 MED27Q6P2C8 311 aa5.41□□□□□ -1.54
PTPRB-202ENST00000334414 NAPRTQ6XQN6 538 aa5.41□□□□□ -1.54
PTPRB-202ENST00000334414 MALSU1Q96EH3 234 aa5.41□□□□□ -1.54
PTPRB-202ENST00000334414 GLTPQ9NZD2 209 aa5.41□□□□□ -1.54
PTPRB-202ENST00000334414 SRRDQ9UH36 339 aa5.41□□□□□ -1.54
PTPRB-202ENST00000334414 TNFSF13BQ9Y275 285 aa5.41□□□□□ -1.54
PTPRB-202ENST00000334414 PRAMEF22A3QJZ6 481 aa5.41□□□□□ -1.54
PTPRB-202ENST00000334414 SSX5O60225 188 aa5.41□□□□□ -1.54
PTPRB-202ENST00000334414 HK1P19367 917 aa5.41□□□□□ -1.54
PTPRB-202ENST00000334414 HOXD12P35452 270 aa5.41□□□□□ -1.54
PTPRB-202ENST00000334414 TARDBPQ13148 414 aaKnown RBP eCLIP5.41□□□□□ -1.54
PTPRB-202ENST00000334414 PET117Q6UWS5 81 aa5.41□□□□□ -1.54
PTPRB-202ENST00000334414 OR1J4Q8NGS1 313 aa5.41□□□□□ -1.54
PTPRB-202ENST00000334414 MTFMTQ96DP5 389 aaKnown RBP5.41□□□□□ -1.54
PTPRB-202ENST00000334414 CHFRQ96EP1 664 aa5.41□□□□□ -1.54
PTPRB-202ENST00000334414 TBATAQ96M53 351 aa5.41□□□□□ -1.54
PTPRB-202ENST00000334414 TWNKQ96RR1 684 aa5.41□□□□□ -1.54
PTPRB-202ENST00000334414 ZDHHC6Q9H6R6 413 aa5.41□□□□□ -1.54
PTPRB-202ENST00000334414 COMMD3Q9UBI1 195 aa5.41□□□□□ -1.54
PTPRB-202ENST00000334414 OAZ3Q9UMX2 235 aa5.41□□□□□ -1.54
PTPRB-202ENST00000334414 INMT-MINDY4F8WBC2 141 aa5.41□□□□□ -1.54
PTPRB-202ENST00000334414 FLRT2O43155 660 aa5.41□□□□□ -1.54
PTPRB-202ENST00000334414 MT-CO1P00395 513 aa5.41□□□□□ -1.54
PTPRB-202ENST00000334414 CSF1P09603 554 aa5.41□□□□□ -1.54
PTPRB-202ENST00000334414 MYF6P23409 242 aa5.41□□□□□ -1.54
PTPRB-202ENST00000334414 MAP2K3P46734 347 aa5.41□□□□□ -1.54
PTPRB-202ENST00000334414 DGKGP49619 791 aa5.41□□□□□ -1.54
PTPRB-202ENST00000334414 NDST2P52849 883 aa5.41□□□□□ -1.54
PTPRB-202ENST00000334414 RFWD3Q6PCD5 774 aa5.41□□□□□ -1.54
PTPRB-202ENST00000334414 GALNTL5Q7Z4T8 443 aa5.41□□□□□ -1.54
PTPRB-202ENST00000334414 ARHGAP12Q8IWW6 846 aa5.41□□□□□ -1.54
PTPRB-202ENST00000334414 SLC2A14Q8TDB8 520 aa5.41□□□□□ -1.54
PTPRB-202ENST00000334414 ZNF486Q96H40 463 aaPredicted RBP5.41□□□□□ -1.54
PTPRB-202ENST00000334414 BTN2A3PQ96KV6 586 aa5.41□□□□□ -1.54
PTPRB-202ENST00000334414 SECISBP2Q96T21 854 aaKnown RBP5.41□□□□□ -1.54
PTPRB-202ENST00000334414 GAD1Q99259 594 aa5.41□□□□□ -1.54
PTPRB-202ENST00000334414 POLR2J3Q9H1A7 115 aaKnown RBP5.41□□□□□ -1.54
PTPRB-202ENST00000334414 MED31Q9Y3C7 131 aa5.41□□□□□ -1.54
PTPRB-202ENST00000334414 COLEC10Q9Y6Z7 277 aa5.41□□□□□ -1.54
PTPRB-202ENST00000334414 CNTNAP4Q9C0A0 1308 aa5.41□□□□□ -1.54
PTPRB-202ENST00000334414 POLR1CO15160 346 aaPredicted RBP5.41□□□□□ -1.54
PTPRB-202ENST00000334414 SLITRK3O94933 977 aa5.41□□□□□ -1.54
PTPRB-202ENST00000334414 C22orf31O95567 290 aa5.41□□□□□ -1.54
PTPRB-202ENST00000334414 ITGB1P05556 798 aa5.41□□□□□ -1.54
PTPRB-202ENST00000334414 LHCGRP22888 699 aa5.41□□□□□ -1.54
PTPRB-202ENST00000334414 RPL10P27635 214 aaKnown RBP5.41□□□□□ -1.54
PTPRB-202ENST00000334414 RBMXP38159 391 aaKnown RBP5.41□□□□□ -1.54
PTPRB-202ENST00000334414 CDKN2BP42772 138 aa5.41□□□□□ -1.54
PTPRB-202ENST00000334414 PSEN2P49810 448 aa5.41□□□□□ -1.54
PTPRB-202ENST00000334414 WDR45BQ5MNZ6 344 aa5.41□□□□□ -1.54
PTPRB-202ENST00000334414 LGI2Q8N0V4 545 aa5.41□□□□□ -1.54
PTPRB-202ENST00000334414 SCML4Q8N228 414 aa5.41□□□□□ -1.54
PTPRB-202ENST00000334414 TNFRSF25Q93038 417 aa5.41□□□□□ -1.54
PTPRB-202ENST00000334414 MECRQ9BV79 373 aa5.41□□□□□ -1.54
PTPRB-202ENST00000334414 P2RX2Q9UBL9 471 aa5.41□□□□□ -1.54
PTPRB-202ENST00000334414 PARP4Q9UKK3 1724 aaKnown RBP5.41□□□□□ -1.54
PTPRB-202ENST00000334414 ISM1B1AKI9 464 aa5.41□□□□□ -1.54
PTPRB-202ENST00000334414 TBX10O75333 385 aa5.41□□□□□ -1.54
PTPRB-202ENST00000334414 LATS1O95835 1130 aa5.41□□□□□ -1.54
PTPRB-202ENST00000334414 ZNF823P16415 610 aa5.41□□□□□ -1.54
PTPRB-202ENST00000334414 GLP1RP43220 463 aa5.41□□□□□ -1.54
PTPRB-202ENST00000334414 DUSP4Q13115 394 aa5.41□□□□□ -1.54
PTPRB-202ENST00000334414 DNASE1L3Q13609 305 aa5.41□□□□□ -1.54
PTPRB-202ENST00000334414 TMEM139Q8IV31 216 aa5.41□□□□□ -1.54
PTPRB-202ENST00000334414 PGBD3Q8N328 593 aa5.41□□□□□ -1.54
PTPRB-202ENST00000334414 EFCAB3Q8N7B9 438 aa5.41□□□□□ -1.54
PTPRB-202ENST00000334414 MAPK15Q8TD08 544 aa5.41□□□□□ -1.54
PTPRB-202ENST00000334414 ELMO3Q96BJ8 720 aa5.41□□□□□ -1.54
PTPRB-202ENST00000334414 AHCYL2Q96HN2 611 aaKnown RBP5.41□□□□□ -1.54
PTPRB-202ENST00000334414 ZNF514Q96K75 400 aaPredicted RBP5.41□□□□□ -1.54
PTPRB-202ENST00000334414 LENG8Q96PV6 779 aaPredicted RBP5.41□□□□□ -1.54
PTPRB-202ENST00000334414 FUNDC2Q9BWH2 189 aa5.41□□□□□ -1.54
PTPRB-202ENST00000334414 CHIAQ9BZP6 476 aa5.41□□□□□ -1.54
PTPRB-202ENST00000334414 SPIN1Q9Y657 262 aaPredicted RBP5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms