RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 TRPV5Q9NQA5 729 aa9.43□□□□□ -0.9
PTPRA-202ENST00000318266 GPR83Q9NYM4 423 aa9.43□□□□□ -0.9
PTPRA-202ENST00000318266 MOXD2PA6NHM9 499 aa9.43□□□□□ -0.9
PTPRA-202ENST00000318266 GPR182O15218 404 aa9.43□□□□□ -0.9
PTPRA-202ENST00000318266 ABCB1P08183 1280 aaPredicted RBP9.43□□□□□ -0.9
PTPRA-202ENST00000318266 AQP1P29972 269 aa9.43□□□□□ -0.9
PTPRA-202ENST00000318266 SLC15A1P46059 708 aa9.43□□□□□ -0.9
PTPRA-202ENST00000318266 BRCC3P46736 316 aa9.43□□□□□ -0.9
PTPRA-202ENST00000318266 IL2P60568 153 aa9.43□□□□□ -0.9
PTPRA-202ENST00000318266 VLDLRP98155 873 aa9.43□□□□□ -0.9
PTPRA-202ENST00000318266 SLAMF1Q13291 335 aa9.43□□□□□ -0.9
PTPRA-202ENST00000318266 ZNF235Q14590 738 aa9.43□□□□□ -0.9
PTPRA-202ENST00000318266 TRIM60Q495X7 471 aa9.43□□□□□ -0.9
PTPRA-202ENST00000318266 ZRANB3Q5FWF4 1079 aa9.43□□□□□ -0.9
PTPRA-202ENST00000318266 MANEALQ5VSG8 457 aa9.43□□□□□ -0.9
PTPRA-202ENST00000318266 TRAF7Q6Q0C0 670 aa9.43□□□□□ -0.9
PTPRA-202ENST00000318266 SPATA17Q96L03 361 aa9.43□□□□□ -0.9
PTPRA-202ENST00000318266 TSSK3Q96PN8 268 aa9.43□□□□□ -0.9
PTPRA-202ENST00000318266 FYTTD1Q96QD9 318 aaKnown RBP9.43□□□□□ -0.9
PTPRA-202ENST00000318266 TTPALQ9BTX7 342 aa9.43□□□□□ -0.9
PTPRA-202ENST00000318266 C1orf109Q9NX04 203 aa9.43□□□□□ -0.9
PTPRA-202ENST00000318266 PLXNA1Q9UIW2 1896 aa9.42□□□□□ -0.9
PTPRA-202ENST00000318266 MICAL3Q7RTP6 2002 aa9.42□□□□□ -0.9
PTPRA-202ENST00000318266 CLDN24A6NM45 220 aa9.42□□□□□ -0.9
PTPRA-202ENST00000318266 UPK3BL1B0FP48 263 aa9.42□□□□□ -0.9
PTPRA-202ENST00000318266 UPK3BL2E5RIL1 263 aa9.42□□□□□ -0.9
PTPRA-202ENST00000318266 VPS26AO75436 327 aa9.42□□□□□ -0.9
PTPRA-202ENST00000318266 TBX18O95935 607 aa9.42□□□□□ -0.9
PTPRA-202ENST00000318266 STSP08842 583 aa9.42□□□□□ -0.9
PTPRA-202ENST00000318266 OR4Q2P0C623 313 aa9.42□□□□□ -0.9
PTPRA-202ENST00000318266 COL6A1P12109 1028 aa9.42□□□□□ -0.9
PTPRA-202ENST00000318266 SLC19A1P41440 591 aa9.42□□□□□ -0.9
PTPRA-202ENST00000318266 CDKN2CP42773 168 aa9.42□□□□□ -0.9
PTPRA-202ENST00000318266 DGKEP52429 567 aa9.42□□□□□ -0.9
PTPRA-202ENST00000318266 PRMT2P55345 433 aa9.42□□□□□ -0.9
PTPRA-202ENST00000318266 ZMAT1Q5H9K5 638 aa9.42□□□□□ -0.9
PTPRA-202ENST00000318266 FAM171A1Q5VUB5 890 aa9.42□□□□□ -0.9
PTPRA-202ENST00000318266 ZNF544Q6NX49 715 aa9.42□□□□□ -0.9
PTPRA-202ENST00000318266 SUSD1Q6UWL2 747 aa9.42□□□□□ -0.9
PTPRA-202ENST00000318266 RASAL3Q86YV0 1011 aa9.42□□□□□ -0.9
PTPRA-202ENST00000318266 FBLIM1Q8WUP2 373 aa9.42□□□□□ -0.9
PTPRA-202ENST00000318266 DPH2Q9BQC3 489 aaPredicted RBP9.42□□□□□ -0.9
PTPRA-202ENST00000318266 MMP28Q9H239 520 aa9.42□□□□□ -0.9
PTPRA-202ENST00000318266 EXOSC4Q9NPD3 245 aaKnown RBP9.42□□□□□ -0.9
PTPRA-202ENST00000318266 TAS2R9Q9NYW1 312 aa9.42□□□□□ -0.9
PTPRA-202ENST00000318266 NYNRINQ9P2P1 1898 aaKnown RBP9.42□□□□□ -0.9
PTPRA-202ENST00000318266 A0A1W2PQH9 124 aa9.42□□□□□ -0.9
PTPRA-202ENST00000318266 OR7A17O14581 309 aa9.42□□□□□ -0.9
PTPRA-202ENST00000318266 STX16O14662 325 aa9.42□□□□□ -0.9
PTPRA-202ENST00000318266 FKTNO75072 461 aa9.42□□□□□ -0.9
PTPRA-202ENST00000318266 TSPAN12O95859 305 aa9.42□□□□□ -0.9
PTPRA-202ENST00000318266 CA5AP35218 305 aa9.42□□□□□ -0.9
PTPRA-202ENST00000318266 LHX1P48742 406 aa9.42□□□□□ -0.9
PTPRA-202ENST00000318266 TUFMP49411 452 aaKnown RBP9.42□□□□□ -0.9
PTPRA-202ENST00000318266 KIAA0040Q15053 153 aa9.42□□□□□ -0.9
PTPRA-202ENST00000318266 TIGD5Q53EQ6 642 aa9.42□□□□□ -0.9
PTPRA-202ENST00000318266 ARMC4Q5T2S8 1044 aa9.42□□□□□ -0.9
PTPRA-202ENST00000318266 KIAA1614Q5VZ46 1190 aa9.42□□□□□ -0.9
PTPRA-202ENST00000318266 DOK6Q6PKX4 331 aa9.42□□□□□ -0.9
PTPRA-202ENST00000318266 NEK10Q6ZWH5 1172 aa9.42□□□□□ -0.9
PTPRA-202ENST00000318266 LRRTM3Q86VH5 581 aa9.42□□□□□ -0.9
PTPRA-202ENST00000318266 FAM217AQ8IXS0 508 aa9.42□□□□□ -0.9
PTPRA-202ENST00000318266 ENTHD1Q8IYW4 607 aa9.42□□□□□ -0.9
PTPRA-202ENST00000318266 CYP4Z2PQ8N1L4 340 aa9.42□□□□□ -0.9
PTPRA-202ENST00000318266 KIAA1958Q8N8K9 716 aa9.42□□□□□ -0.9
PTPRA-202ENST00000318266 GPR152Q8TDT2 470 aa9.42□□□□□ -0.9
PTPRA-202ENST00000318266 APH1BQ8WW43 257 aa9.42□□□□□ -0.9
PTPRA-202ENST00000318266 ZNF382Q96SR6 550 aa9.42□□□□□ -0.9
PTPRA-202ENST00000318266 EGFL8Q99944 293 aa9.42□□□□□ -0.9
PTPRA-202ENST00000318266 CCNB1IP1Q9NPC3 277 aa9.42□□□□□ -0.9
PTPRA-202ENST00000318266 CCDC177Q9NQR7 707 aaPredicted RBP9.42□□□□□ -0.9
PTPRA-202ENST00000318266 KCNH4Q9UQ05 1017 aa9.42□□□□□ -0.9
PTPRA-202ENST00000318266 ANGPTL3Q9Y5C1 460 aa9.42□□□□□ -0.9
PTPRA-202ENST00000318266 PPP2R3BQ9Y5P8 575 aa9.42□□□□□ -0.9
PTPRA-202ENST00000318266 ZSCAN5BA6NJL1 495 aa9.41□□□□□ -0.9
PTPRA-202ENST00000318266 SCO2O43819 266 aa9.41□□□□□ -0.9
PTPRA-202ENST00000318266 SLC25A27O95847 323 aa9.41□□□□□ -0.9
PTPRA-202ENST00000318266 RPLP0P05388 317 aaKnown RBP9.41□□□□□ -0.9
PTPRA-202ENST00000318266 TUBA1BP68363 451 aa9.41□□□□□ -0.9
PTPRA-202ENST00000318266 CD83Q01151 205 aa9.41□□□□□ -0.9
PTPRA-202ENST00000318266 GALK2Q01415 458 aa9.41□□□□□ -0.9
PTPRA-202ENST00000318266 ZNF45Q02386 682 aa9.41□□□□□ -0.9
PTPRA-202ENST00000318266 GTF2H2Q13888 395 aa9.41□□□□□ -0.9
PTPRA-202ENST00000318266 CDK10Q15131 360 aa9.41□□□□□ -0.9
PTPRA-202ENST00000318266 RUNDC3AQ59EK9 446 aa9.41□□□□□ -0.9
PTPRA-202ENST00000318266 CEP78Q5JTW2 689 aa9.41□□□□□ -0.9
PTPRA-202ENST00000318266 KDM4DQ6B0I6 523 aa9.41□□□□□ -0.9
PTPRA-202ENST00000318266 GTF2H2CQ6P1K8 395 aa9.41□□□□□ -0.9
PTPRA-202ENST00000318266 MSANTD2Q6P1R3 559 aa9.41□□□□□ -0.9
PTPRA-202ENST00000318266 ZNF517Q6ZMY9 492 aaPredicted RBP9.41□□□□□ -0.9
PTPRA-202ENST00000318266 TUBA1AQ71U36 451 aa9.41□□□□□ -0.9
PTPRA-202ENST00000318266 GLT6D1Q7Z4J2 308 aa9.41□□□□□ -0.9
PTPRA-202ENST00000318266 GALNT7Q86SF2 657 aa9.41□□□□□ -0.9
PTPRA-202ENST00000318266 TP53I13Q8NBR0 393 aaPredicted RBP9.41□□□□□ -0.9
PTPRA-202ENST00000318266 CDC26Q8NHZ8 85 aa9.41□□□□□ -0.9
PTPRA-202ENST00000318266 SUN5Q8TC36 379 aa9.41□□□□□ -0.9
PTPRA-202ENST00000318266 BRSK1Q8TDC3 778 aa9.41□□□□□ -0.9
PTPRA-202ENST00000318266 ARMC5Q96C12 935 aa9.41□□□□□ -0.9
PTPRA-202ENST00000318266 TRNT1Q96Q11 434 aaKnown RBP9.41□□□□□ -0.9
PTPRA-202ENST00000318266 PHOX2BQ99453 314 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms