RNA–Protein interactions for RNA: ENST00000312988.8

TUBA3E-201, Transcript of tubulin alpha 3e, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBA3E, Length 1,542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA3E-201ENST00000312988 CCDC177Q9NQR7 707 aaPredicted RBP15.22■□□□□ 0.03
TUBA3E-201ENST00000312988 TMEM120BA0PK00 339 aa15.21■□□□□ 0.03
TUBA3E-201ENST00000312988 OR5K3A6NET4 321 aa15.21■□□□□ 0.03
TUBA3E-201ENST00000312988 PRPF4O43172 522 aaKnown RBP eCLIP15.21■□□□□ 0.03
TUBA3E-201ENST00000312988 RFPL3O75679 317 aa15.21■□□□□ 0.03
TUBA3E-201ENST00000312988 GP1BAP07359 652 aa15.21■□□□□ 0.03
TUBA3E-201ENST00000312988 ERGP11308 486 aa15.21■□□□□ 0.03
TUBA3E-201ENST00000312988 MTHFD2P13995 350 aa15.21■□□□□ 0.03
TUBA3E-201ENST00000312988 CSRP1P21291 193 aaKnown RBP15.21■□□□□ 0.03
TUBA3E-201ENST00000312988 ALDH18A1P54886 795 aaKnown RBP15.21■□□□□ 0.03
TUBA3E-201ENST00000312988 C18orf21Q32NC0 220 aaPredicted RBP15.21■□□□□ 0.03
TUBA3E-201ENST00000312988 ADGRF3Q8IZF5 1079 aa15.21■□□□□ 0.03
TUBA3E-201ENST00000312988 PTGR2Q8N8N7 351 aaPredicted RBP15.21■□□□□ 0.03
TUBA3E-201ENST00000312988 LINC01555Q8NAE3 123 aa15.21■□□□□ 0.03
TUBA3E-201ENST00000312988 PYCR2Q96C36 320 aa15.21■□□□□ 0.03
TUBA3E-201ENST00000312988 PHF21BQ96EK2 531 aa15.21■□□□□ 0.03
TUBA3E-201ENST00000312988 CNOT10Q9H9A5 744 aaKnown RBP15.21■□□□□ 0.03
TUBA3E-201ENST00000312988 NKIRAS1Q9NYS0 192 aa15.21■□□□□ 0.03
TUBA3E-201ENST00000312988 ACTR10Q9NZ32 417 aa15.21■□□□□ 0.03
TUBA3E-201ENST00000312988 OGFRQ9NZT2 677 aa15.21■□□□□ 0.03
TUBA3E-201ENST00000312988 SPAARA0A1B0GVQ0 90 aa15.2■□□□□ 0.02
TUBA3E-201ENST00000312988 C2orf74A8MZ97 194 aa15.2■□□□□ 0.02
TUBA3E-201ENST00000312988 E7ENX8 843 aa15.2■□□□□ 0.02
TUBA3E-201ENST00000312988 MATN2O00339 956 aa15.2■□□□□ 0.02
TUBA3E-201ENST00000312988 TM9SF1O15321 606 aa15.2■□□□□ 0.02
TUBA3E-201ENST00000312988 CCNT2O60583 730 aaKnown RBP15.2■□□□□ 0.02
TUBA3E-201ENST00000312988 WDR47O94967 919 aa15.2■□□□□ 0.02
TUBA3E-201ENST00000312988 ZWINTO95229 277 aa15.2■□□□□ 0.02
TUBA3E-201ENST00000312988 SBK3P0C264 359 aa15.2■□□□□ 0.02
TUBA3E-201ENST00000312988 CPA3P15088 417 aa15.2■□□□□ 0.02
TUBA3E-201ENST00000312988 KCNA4P22459 653 aa15.2■□□□□ 0.02
TUBA3E-201ENST00000312988 ATP5F1P24539 256 aaPredicted RBP15.2■□□□□ 0.02
TUBA3E-201ENST00000312988 CD1CP29017 333 aa15.2■□□□□ 0.02
TUBA3E-201ENST00000312988 PLA2G5P39877 138 aa15.2■□□□□ 0.02
TUBA3E-201ENST00000312988 HSPA7P48741 367 aa15.2■□□□□ 0.02
TUBA3E-201ENST00000312988 NOVA1P51513 510 aaKnown RBP15.2■□□□□ 0.02
TUBA3E-201ENST00000312988 TBPL1P62380 186 aa15.2■□□□□ 0.02
TUBA3E-201ENST00000312988 TAP2Q03519 686 aa15.2■□□□□ 0.02
TUBA3E-201ENST00000312988 ILKQ13418 452 aa15.2■□□□□ 0.02
TUBA3E-201ENST00000312988 KIR2DS3Q14952 304 aa15.2■□□□□ 0.02
TUBA3E-201ENST00000312988 RSPO4Q2I0M5 234 aaPredicted RBP15.2■□□□□ 0.02
TUBA3E-201ENST00000312988 PTCHD3Q3KNS1 767 aa15.2■□□□□ 0.02
TUBA3E-201ENST00000312988 CAPN13Q6MZZ7 669 aaPredicted RBP15.2■□□□□ 0.02
TUBA3E-201ENST00000312988 ZYG11AQ6WRX3 759 aa15.2■□□□□ 0.02
TUBA3E-201ENST00000312988 TMEM151AQ8N4L1 468 aa15.2■□□□□ 0.02
TUBA3E-201ENST00000312988 HMGCLL1Q8TB92 370 aa15.2■□□□□ 0.02
TUBA3E-201ENST00000312988 RDH11Q8TC12 318 aa15.2■□□□□ 0.02
TUBA3E-201ENST00000312988 MGARPQ8TDB4 240 aa15.2■□□□□ 0.02
TUBA3E-201ENST00000312988 SLC22A18Q96BI1 424 aa15.2■□□□□ 0.02
TUBA3E-201ENST00000312988 TGM7Q96PF1 710 aa15.2■□□□□ 0.02
TUBA3E-201ENST00000312988 GFM1Q96RP9 751 aaKnown RBP15.2■□□□□ 0.02
TUBA3E-201ENST00000312988 ACAT2Q9BWD1 397 aa15.2■□□□□ 0.02
TUBA3E-201ENST00000312988 SPHK1Q9NYA1 384 aa15.2■□□□□ 0.02
TUBA3E-201ENST00000312988 PTBP2Q9UKA9 531 aaKnown RBP15.2■□□□□ 0.02
TUBA3E-201ENST00000312988 ATXN7L1Q9ULK2 861 aaPredicted RBP15.2■□□□□ 0.02
TUBA3E-201ENST00000312988 ENTPD2Q9Y5L3 495 aa15.2■□□□□ 0.02
TUBA3E-201ENST00000312988 UNC13CQ8NB66 2214 aa15.19■□□□□ 0.02
TUBA3E-201ENST00000312988 A8MT66 165 aa15.19■□□□□ 0.02
TUBA3E-201ENST00000312988 TARM1B6A8C7 271 aa15.19■□□□□ 0.02
TUBA3E-201ENST00000312988 CAPN5O15484 640 aaPredicted RBP15.19■□□□□ 0.02
TUBA3E-201ENST00000312988 TAPBPO15533 448 aa15.19■□□□□ 0.02
TUBA3E-201ENST00000312988 DLX3O60479 287 aa15.19■□□□□ 0.02
TUBA3E-201ENST00000312988 STK16O75716 305 aa15.19■□□□□ 0.02
TUBA3E-201ENST00000312988 IPO13O94829 963 aaKnown RBP15.19■□□□□ 0.02
TUBA3E-201ENST00000312988 SDHBP21912 280 aa15.19■□□□□ 0.02
TUBA3E-201ENST00000312988 CCND1P24385 295 aa15.19■□□□□ 0.02
TUBA3E-201ENST00000312988 OAS2P29728 719 aaKnown RBP15.19■□□□□ 0.02
TUBA3E-201ENST00000312988 AGTR2P50052 363 aa15.19■□□□□ 0.02
TUBA3E-201ENST00000312988 SIM1P81133 766 aaPredicted RBP15.19■□□□□ 0.02
TUBA3E-201ENST00000312988 SETDB1Q15047 1291 aa15.19■□□□□ 0.02
TUBA3E-201ENST00000312988 PRAMEF13Q5VWM6 474 aa15.19■□□□□ 0.02
TUBA3E-201ENST00000312988 GLRX5Q86SX6 157 aa15.19■□□□□ 0.02
TUBA3E-201ENST00000312988 PLXDC1Q8IUK5 500 aa15.19■□□□□ 0.02
TUBA3E-201ENST00000312988 SLC22A9Q8IVM8 553 aa15.19■□□□□ 0.02
TUBA3E-201ENST00000312988 SNX31Q8N9S9 440 aa15.19■□□□□ 0.02
TUBA3E-201ENST00000312988 OR56A3Q8NH54 315 aa15.19■□□□□ 0.02
TUBA3E-201ENST00000312988 ESAMQ96AP7 390 aa15.19■□□□□ 0.02
TUBA3E-201ENST00000312988 ZDHHC12Q96GR4 267 aa15.19■□□□□ 0.02
TUBA3E-201ENST00000312988 PAIP2Q9BPZ3 127 aaKnown RBP15.19■□□□□ 0.02
TUBA3E-201ENST00000312988 TMEM79Q9BSE2 394 aa15.19■□□□□ 0.02
TUBA3E-201ENST00000312988 MED4Q9NPJ6 270 aa15.19■□□□□ 0.02
TUBA3E-201ENST00000312988 KLHL3Q9UH77 587 aa15.19■□□□□ 0.02
TUBA3E-201ENST00000312988 TAC3Q9UHF0 121 aa15.19■□□□□ 0.02
TUBA3E-201ENST00000312988 ANGPTL3Q9Y5C1 460 aa15.19■□□□□ 0.02
TUBA3E-201ENST00000312988 PCDHB11Q9Y5F2 797 aa15.19■□□□□ 0.02
TUBA3E-201ENST00000312988 TNPO3Q9Y5L0 923 aaKnown RBP15.19■□□□□ 0.02
TUBA3E-201ENST00000312988 DNAH14Q0VDD8 3507 aa15.19■□□□□ 0.02
TUBA3E-201ENST00000312988 PCNX2A6NKB5 2137 aa15.19■□□□□ 0.02
TUBA3E-201ENST00000312988 CEP250Q9BV73 2442 aa15.19■□□□□ 0.02
TUBA3E-201ENST00000312988 A0A1W2PQM1 296 aa15.18■□□□□ 0.02
TUBA3E-201ENST00000312988 G3V2L1 256 aa15.18■□□□□ 0.02
TUBA3E-201ENST00000312988 CASC3O15234 703 aaKnown RBP15.18■□□□□ 0.02
TUBA3E-201ENST00000312988 KLK8O60259 260 aa15.18■□□□□ 0.02
TUBA3E-201ENST00000312988 CPNE6O95741 557 aa15.18■□□□□ 0.02
TUBA3E-201ENST00000312988 UGT2B7P16662 529 aa15.18■□□□□ 0.02
TUBA3E-201ENST00000312988 PSMB5P28074 263 aa15.18■□□□□ 0.02
TUBA3E-201ENST00000312988 EEF1DP29692 281 aaKnown RBP15.18■□□□□ 0.02
TUBA3E-201ENST00000312988 PEBP1P30086 187 aaKnown RBP15.18■□□□□ 0.02
TUBA3E-201ENST00000312988 CSF2RBP32927 897 aa15.18■□□□□ 0.02
TUBA3E-201ENST00000312988 GDF5P43026 501 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms