RNA–Protein interactions for RNA: ENST00000309641.10

PDE4D-201, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best)

Gene PDE4D, Length 2,025 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-201ENST00000309641 PNLIPRP1P54315 467 aa8.78□□□□□ -1
PDE4D-201ENST00000309641 ILF2Q12905 390 aaKnown RBP8.78□□□□□ -1
PDE4D-201ENST00000309641 PRKAA1Q13131 559 aa8.78□□□□□ -1
PDE4D-201ENST00000309641 SP140Q13342 867 aa8.78□□□□□ -1
PDE4D-201ENST00000309641 PCM1Q15154 2024 aa8.78□□□□□ -1
PDE4D-201ENST00000309641 BEND6Q5SZJ8 279 aaPredicted RBP8.78□□□□□ -1
PDE4D-201ENST00000309641 KIAA1614Q5VZ46 1190 aa8.78□□□□□ -1
PDE4D-201ENST00000309641 ANKS6Q68DC2 871 aa8.78□□□□□ -1
PDE4D-201ENST00000309641 ARMC6Q6NXE6 501 aa8.78□□□□□ -1
PDE4D-201ENST00000309641 AGTRAPQ6RW13 159 aa8.78□□□□□ -1
PDE4D-201ENST00000309641 SPESP1Q6UW49 350 aa8.78□□□□□ -1
PDE4D-201ENST00000309641 RAB11FIP2Q7L804 512 aa8.78□□□□□ -1
PDE4D-201ENST00000309641 ERMP1Q7Z2K6 904 aa8.78□□□□□ -1
PDE4D-201ENST00000309641 TBC1D1Q86TI0 1168 aaPredicted RBP8.78□□□□□ -1
PDE4D-201ENST00000309641 SYTL1Q8IYJ3 562 aa8.78□□□□□ -1
PDE4D-201ENST00000309641 CACTIN-AS1Q8N1I8 211 aa8.78□□□□□ -1
PDE4D-201ENST00000309641 OR2A1Q8NGT9 310 aa8.78□□□□□ -1
PDE4D-201ENST00000309641 HMGCLL1Q8TB92 370 aa8.78□□□□□ -1
PDE4D-201ENST00000309641 EXT2Q93063 718 aa8.78□□□□□ -1
PDE4D-201ENST00000309641 PRR11Q96HE9 360 aaPredicted RBP8.78□□□□□ -1
PDE4D-201ENST00000309641 APMAPQ9HDC9 416 aa8.78□□□□□ -1
PDE4D-201ENST00000309641 FAM60AQ9NP50 221 aa8.78□□□□□ -1
PDE4D-201ENST00000309641 PCMTD2Q9NV79 361 aa8.78□□□□□ -1
PDE4D-201ENST00000309641 ARL15Q9NXU5 204 aa8.78□□□□□ -1
PDE4D-201ENST00000309641 LNPEPQ9UIQ6 1025 aa8.78□□□□□ -1
PDE4D-201ENST00000309641 TLK1Q9UKI8 766 aa8.78□□□□□ -1
PDE4D-201ENST00000309641 SH2B3Q9UQQ2 575 aa8.78□□□□□ -1
PDE4D-201ENST00000309641 ADAMTS20P59510 1910 aa8.77□□□□□ -1
PDE4D-201ENST00000309641 TLCD2A6NGC4 264 aa8.77□□□□□ -1.01
PDE4D-201ENST00000309641 SLC16A5O15375 505 aa8.77□□□□□ -1.01
PDE4D-201ENST00000309641 TUBBP07437 444 aa8.77□□□□□ -1.01
PDE4D-201ENST00000309641 CTSBP07858 339 aa8.77□□□□□ -1.01
PDE4D-201ENST00000309641 PYGBP11216 843 aa8.77□□□□□ -1.01
PDE4D-201ENST00000309641 FOLR1P15328 257 aa8.77□□□□□ -1.01
PDE4D-201ENST00000309641 MAGP20916 626 aa8.77□□□□□ -1.01
PDE4D-201ENST00000309641 CNTFP26441 200 aa8.77□□□□□ -1.01
PDE4D-201ENST00000309641 NAE1Q13564 534 aa8.77□□□□□ -1.01
PDE4D-201ENST00000309641 TGFBIQ15582 683 aa8.77□□□□□ -1.01
PDE4D-201ENST00000309641 CLPPQ16740 277 aaPredicted RBP8.77□□□□□ -1.01
PDE4D-201ENST00000309641 TIFABQ6ZNK6 161 aa8.77□□□□□ -1.01
PDE4D-201ENST00000309641 SH2D5Q6ZV89 423 aa8.77□□□□□ -1.01
PDE4D-201ENST00000309641 PRSS42Q7Z5A4 293 aa8.77□□□□□ -1.01
PDE4D-201ENST00000309641 FAM129CQ86XR2 697 aa8.77□□□□□ -1.01
PDE4D-201ENST00000309641 TDRPQ86YL5 185 aa8.77□□□□□ -1.01
PDE4D-201ENST00000309641 IQCKQ8N0W5 287 aa8.77□□□□□ -1.01
PDE4D-201ENST00000309641 MYRIPQ8NFW9 859 aa8.77□□□□□ -1.01
PDE4D-201ENST00000309641 KLHL6Q8WZ60 621 aa8.77□□□□□ -1.01
PDE4D-201ENST00000309641 ANKRD7Q92527 254 aa8.77□□□□□ -1.01
PDE4D-201ENST00000309641 KIAA1191Q96A73 305 aa8.77□□□□□ -1.01
PDE4D-201ENST00000309641 ALKBH8Q96BT7 664 aaKnown RBP8.77□□□□□ -1.01
PDE4D-201ENST00000309641 LIN37Q96GY3 246 aaPredicted RBP8.77□□□□□ -1.01
PDE4D-201ENST00000309641 TRAPPC9Q96Q05 1148 aa8.77□□□□□ -1.01
PDE4D-201ENST00000309641 ATOH8Q96SQ7 321 aa8.77□□□□□ -1.01
PDE4D-201ENST00000309641 MIPEPQ99797 713 aa8.77□□□□□ -1.01
PDE4D-201ENST00000309641 CCDC77Q9BR77 488 aa8.77□□□□□ -1.01
PDE4D-201ENST00000309641 PITPNM3Q9BZ71 974 aa8.77□□□□□ -1.01
PDE4D-201ENST00000309641 INTS7Q9NVH2 962 aaKnown RBP8.77□□□□□ -1.01
PDE4D-201ENST00000309641 SPATA7Q9P0W8 599 aa8.77□□□□□ -1.01
PDE4D-201ENST00000309641 SEMA5BQ9P283 1151 aa8.77□□□□□ -1.01
PDE4D-201ENST00000309641 TAC3Q9UHF0 121 aa8.77□□□□□ -1.01
PDE4D-201ENST00000309641 MSRB2Q9Y3D2 182 aa8.77□□□□□ -1.01
PDE4D-201ENST00000309641 LOXL2Q9Y4K0 774 aa8.77□□□□□ -1.01
PDE4D-201ENST00000309641 OARD1Q9Y530 152 aa8.77□□□□□ -1.01
PDE4D-201ENST00000309641 ASB1Q9Y576 335 aa8.77□□□□□ -1.01
PDE4D-201ENST00000309641 AHCTF1Q8WYP5 2266 aa8.77□□□□□ -1.01
PDE4D-201ENST00000309641 TPRP12270 2363 aaKnown RBP8.77□□□□□ -1.01
PDE4D-201ENST00000309641 LOC400499M0QZD8 3231 aa8.77□□□□□ -1.01
PDE4D-201ENST00000309641 APC2O95996 2303 aa8.77□□□□□ -1.01
PDE4D-201ENST00000309641 A0A087X1B8 175 aa8.76□□□□□ -1.01
PDE4D-201ENST00000309641 CCDC187A0A096LP49 1063 aa8.76□□□□□ -1.01
PDE4D-201ENST00000309641 IGKV1-8A0A0C4DH67 115 aa8.76□□□□□ -1.01
PDE4D-201ENST00000309641 CCDC151A5D8V7 595 aa8.76□□□□□ -1.01
PDE4D-201ENST00000309641 EFCAB7A8K855 629 aa8.76□□□□□ -1.01
PDE4D-201ENST00000309641 UBXN8O00124 270 aa8.76□□□□□ -1.01
PDE4D-201ENST00000309641 PLD2O14939 933 aa8.76□□□□□ -1.01
PDE4D-201ENST00000309641 TAPBPO15533 448 aa8.76□□□□□ -1.01
PDE4D-201ENST00000309641 KLHL2O95198 593 aa8.76□□□□□ -1.01
PDE4D-201ENST00000309641 MTHFD2P13995 350 aa8.76□□□□□ -1.01
PDE4D-201ENST00000309641 NELFEP18615 380 aaKnown RBP8.76□□□□□ -1.01
PDE4D-201ENST00000309641 OAS2P29728 719 aaKnown RBP8.76□□□□□ -1.01
PDE4D-201ENST00000309641 GRIA3P42263 894 aa8.76□□□□□ -1.01
PDE4D-201ENST00000309641 GDF5P43026 501 aa8.76□□□□□ -1.01
PDE4D-201ENST00000309641 TBPL1P62380 186 aa8.76□□□□□ -1.01
PDE4D-201ENST00000309641 GABREP78334 506 aa8.76□□□□□ -1.01
PDE4D-201ENST00000309641 SHC2P98077 582 aa8.76□□□□□ -1.01
PDE4D-201ENST00000309641 ZNF844Q08AG5 666 aa8.76□□□□□ -1.01
PDE4D-201ENST00000309641 KIR2DS3Q14952 304 aa8.76□□□□□ -1.01
PDE4D-201ENST00000309641 ARHGAP19Q14CB8 494 aa8.76□□□□□ -1.01
PDE4D-201ENST00000309641 SF1Q15637 639 aaKnown RBP8.76□□□□□ -1.01
PDE4D-201ENST00000309641 TAF1BQ53T94 588 aaPredicted RBP8.76□□□□□ -1.01
PDE4D-201ENST00000309641 TAOK1Q7L7X3 1001 aa8.76□□□□□ -1.01
PDE4D-201ENST00000309641 CLEC14AQ86T13 490 aa8.76□□□□□ -1.01
PDE4D-201ENST00000309641 ADAMTSL2Q86TH1 951 aa8.76□□□□□ -1.01
PDE4D-201ENST00000309641 GPSM1Q86YR5 675 aa8.76□□□□□ -1.01
PDE4D-201ENST00000309641 FBXO39Q8N4B4 442 aa8.76□□□□□ -1.01
PDE4D-201ENST00000309641 BMPERQ8N8U9 685 aa8.76□□□□□ -1.01
PDE4D-201ENST00000309641 OR2L3Q8NG85 312 aa8.76□□□□□ -1.01
PDE4D-201ENST00000309641 SMPDL3AQ92484 453 aa8.76□□□□□ -1.01
PDE4D-201ENST00000309641 MED8Q96G25 268 aa8.76□□□□□ -1.01
PDE4D-201ENST00000309641 SLC41A2Q96JW4 573 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms